Array 1 10886-11254 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABJUU010000035.1 Anoxybacillus flavithermus strain WS5286 35_21257_31.672, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================== ================== 10886 30 100.0 40 .............................. CCATTTCCGATGGGTCTACGAGTGGACAAACCGTTTATTT 10956 30 100.0 39 .............................. TTATAAGCGGGCGGTCTGTAAGATGACGATCATCGCTCC 11025 30 100.0 38 .............................. TAGCGATTAATAAGCACGCAAAAGGGTGAGGGTAAATT 11093 30 100.0 38 .............................. TCCCATCAGCAACGTCGATCGCTGCGTCGTAAATTAGT 11161 30 96.7 34 .............................T AATGGAATCACAATGTTGCCTCCTGCTAGATAAA 11225 30 80.0 0 A.......................A.CGTT | ========== ====== ====== ====== ============================== ======================================== ================== 6 30 96.1 38 GTTTGTATCGTACCTATGAGGAATTGAAAC # Left flank : GAAGCGATCGATGCAACAAAGCGCCCGCTCGTAATCGGAGGTGTATTCGTACTTATGCTTGCATCGATCATTTTCTCTCACCGCGCCAACACATATTTGCGCAAATTAGACAATGAACAGTAAATTCCCCTGTTTTCGTACAAAGAAAAAACATGTAAAATAAAAGAAAATGGGTAAAGGGGGAATAAACGATGATGTGGATGATTACAGGTCTAGTCATTACAGCTGTCATCGGTTTTGTTATTATCGCGGAAGTGAACGCCGAAGCATAAAACAGTCTCTAAACAGGAGACTGTTTTTAATAAAATTTATTTGTGATAAACTTCACAACTGTCGTCGACCTCCAATCGTGCAAAAACTTCGGGGGATCGACGACAGTTTATTTTATGCGAATTTTTTAGCTGTATCAACGGACATAGACTATTGACTGAATTTTCAAATGTATGTATAATGATGTTGTATAGCTTTTCCATGTGTTGATATATCAACGCTTTTTTGGG # Right flank : TTTTTGTATTGAAAAGCAGGGATGTTTATGCCCTGCTTTTATTTTTTTGTTACAACTTTGTTACAACTTTCAGAAAAGTATTGCGCAAAAACTAGTTCGTTTGTATCATCAGTAATATGAGGATATTTTTTGAAAAGGTGGATAAGGGATGAAACTACTAACATTTCTCGGCGCGAATGACTATCGTGAAACAACGTATCGTTTTCGGGAGCGTGTGCATACGGCAAAGTTTTTTCTATCTGTCCTTATTCAAGAACTGCAACCAGGTGAAATATACGTATTTATGACAGATGGGGCACGAGAGAAAAACGAAGCACCGTTGCTTGACGAATTAAACCGATACGGCGTAGATGAAAAGAAAGTGCATGCTGTATGCATTCCCGATGGGCAAACAGAAGAAGATTTATGGAATATTTTTTCTGTTATTGCTGATCATGTGTATGAACATGATGAAATCGTCCTTGATATTACGCACGGATTTCGGACGTTGCCGCTCGTTG # Questionable array : NO Score: 9.06 # Score Detail : 1:0, 2:3, 3:3, 4:0.80, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGTATCGTACCTATGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:65.52%AT] # Reference repeat match prediction: F [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.60,-0.20] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.41,0 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 1 21324-18684 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABJUU010000034.1 Anoxybacillus flavithermus strain WS5286 34_21456_26.7547, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================= ================== 21323 37 100.0 34 ..................................... TTTTTCAGTGTTCCATAGTATGTTGCTGTTTTTA 21252 37 100.0 38 ..................................... AAAACCCTCGGAATCGGAAAGTCCCAATCAACCGAACC 21177 37 100.0 34 ..................................... CTGGACGTACAGATGGCAAAACTGCGCCTACAAC 21106 37 100.0 33 ..................................... CGTTCGGGAGTCGTGACTATTCTGTGCTTCCTC 21036 37 100.0 36 ..................................... TTTTCTTTAATGGATTAATTTAATGGATTAAAAGGA 20963 37 100.0 35 ..................................... ATCGATTGGAATACCGCAAATGCGCTCCCAATTCG 20891 37 100.0 34 ..................................... ATTCATCACATCACCTTTTAGCGATCATTGAGAC 20820 37 100.0 35 ..................................... GTTTTGTATCTCGTCAATGGCAAAAATGACACCTT 20748 37 100.0 35 ..................................... AGCGGTTACAACTGCATTAGCGACAGCCACATTTT 20676 37 100.0 35 ..................................... ATATAAACAAAAACCTCCTATTTTCGTCAGACAAA 20604 37 100.0 39 ..................................... TTTTCGTCAGACAAAAAATAAAACGCCTAATCCACTATC 20528 37 100.0 34 ..................................... TCGGTGCTATAGCTGTGGCTGGTTTGGCTGCTAC 20457 37 100.0 35 ..................................... ATGATTCGCTGGACATAGTGGAAAAGATGGGCTTT 20385 37 100.0 37 ..................................... CAAAGGGAGCAGGGTCCCGGCGTCAAGGGCGTCAATG 20311 37 100.0 36 ..................................... TAATCTCAAACACATACTGCGGATTGTGTTCGTTCA 20238 37 100.0 39 ..................................... ATCCTTTAGAACATCGTCCGAGTCCCCGTCAATCTTGGC 20162 37 100.0 36 ..................................... ATCATTAATGATCATCTCCTTTTTTTAATGCTTTAA 20089 37 100.0 35 ..................................... GACATCACCCAGATATTTCTTCCACCAGTCAGAGA 20017 37 100.0 35 ..................................... ATAACAAAACCTCCTAATCCACTATCATGTCTTTT 19945 37 100.0 35 ..................................... GAGTGCTCGTTTGAAAATGAACATCTCGGCAAAAT 19873 37 100.0 36 ..................................... AAATATTCAAAAGCGCGCGGAGCATACTATTGGGAT 19800 37 100.0 36 ..................................... AACTCTCGCGATTGGCAACATGACCGTCAATCACGC 19727 37 100.0 33 ..................................... AGCGTCAACCTCCCGATCAGCGACCGAACGCAA 19657 37 100.0 36 ..................................... TTGCTCATGTCCCCAGATTCGTTCCGAAAACTCTTT 19584 37 100.0 35 ..................................... CTACCGAACCAGCGCTCAGCTTACCAATAGTCCCG 19512 37 100.0 37 ..................................... AAGCAAGCACTCATCCCAGACGAGTTTGTGCATGCGA 19438 37 100.0 34 ..................................... CGCTAATTAGACAGCGGAAAAATAAAATTTATTC 19367 37 100.0 36 ..................................... TCATGGTCATCATCCCATCACGCAGCCGTACCCATG 19294 37 100.0 33 ..................................... TATCCCGTCCTCTTCTTTTCTCCATTGAGCCAC 19224 37 100.0 33 ..................................... TGTTCACCTCCTCCAACGCGTTTCGCATGCAAC 19154 37 100.0 37 ..................................... TTGCCGCGCGTGACGCACCTTGAGCGACAATGTCGCG 19080 37 100.0 34 ..................................... AATGAATGAAAAACCGTCTAATTGCTCTATAATT 19009 37 100.0 33 ..................................... CAAACAGCTTCAATCGTATCGCCGAGTTGATCA 18939 37 100.0 34 ..................................... CTAAATTTCGAGGTCACATGACCCCTTTTAAGTT 18868 37 100.0 39 ..................................... ATAGACCTTCCTCCTCAATCTTTTGGCATAAAAACTCAA 18792 37 100.0 35 ..................................... CACTTATCTATGATTGAATTCATGCTTCTCATCAC 18720 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ======================================= ================== 37 37 100.0 35 GTTGCACCCAGCATAAAAGCTGGGTGAGGATTGAAAC # Left flank : CTATTCATGAGACATGAACCTCCTTGTGAATGGTTTGTTGGCACATCTATTCTAACCAAGGAATCGGGTTCATGTCTTCTTTTTTGTTTGGTTGTAAATTTATGTTAGTAAATTTGCTCATCTACAGTTATA # Right flank : TGCAGAAGGAAGTATTGCGTAATAACGTATGTGCTGAAACTGTCGTGCGCATGACGATGTTGATCGTGGAACAATTATCAAATAAGTACATGCAACTGTATAAACATAAACAATATGATCCCATTCGGCAAGGGGATTTGCTTGTACGGGAGTTAGAGGAATATGTGAATATTATAAAATATGGAATTTACAAGTAAAGGCGGGGCTTTTCCCGCCTCATTTATTTGTAAGAAAATTATTGAAATTTTCTGTTTTTATATGATATGATATTCTCAAGGAATTTGAAACTATGTTTCGTAATACGCAACAAAAAAGAAAGGGGAATAATGATGGGGGAATATGTACAAGTTGGACGTTTGCAAGTCGCTAAGTTGTTTTATGAATTTATCGTTGAAGAAGTATTGCCAAATAGCCAAGTAGATAAAGATAAATTTTGGAAAAACTTTGAGCAACTCATTAATGAGTTAACACCAAAAAATAAAGCGTTGCTTGCCAAACGC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGCACCCAGCATAAAAGCTGGGTGAGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.35%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-13.20,-12.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [55.0-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.77 Confidence: HIGH] # Array family : NA // Array 1 1794-2356 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABJUU010000045.1 Anoxybacillus flavithermus strain WS5286 45_15888_28.4516, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 1794 36 100.0 30 .................................... GTATCCGTCGTATTCTTCAACGGAACGAAA 1860 36 100.0 29 .................................... TGAAAATATCCGTCCAGCACCTGCAAAGA 1925 36 100.0 30 .................................... TTGTACATTATTGATACTTACCCATACAAG 1991 36 100.0 30 .................................... AGCCGAACATGCAGCAAGCTGGATTTTTCA 2057 36 100.0 30 .................................... CAACGGCAACGGGCGGAGGATTAACAGCAA 2123 36 100.0 30 .................................... TCGATGTAAAGCATCGTGTTGTCATCATCT 2189 36 100.0 30 .................................... ACGGAGGTGATAAATATGCCACGTGTAATG 2255 36 100.0 30 .................................... TATTCATGTAAAATATAATAAAATTATTGA 2321 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 9 36 100.0 30 GTCATAGTTCCCCTGAGGTTATTGCTGTGGTATGAT # Left flank : TCTTACGTTTGGGACGATTGATGAAGCGATTCAAATGATCAACGATTACGAAAAGCCGCTTGCGCTTTATTTGTTTTCAGAAGATCGCGATGTGCAACAACAAGTATTACAACAAGTTCGTTTCGGCGGTGGTTGTATAAACGATACGGTTGTACACGTTGCCAATCCTCATTTGCCCTTCGGTGGTGTTGGACAAAGCGGCATCGGTACATACCATGGAAAAGCAAGCTTTGATGCATTTACTCATTACAAAAGCGTGCTCAAACAGACGACGAAATTTGATATCCCGTTGCGTTACCCAAACTTTCCACATGCGCTCAAATGGGTGCGGAAGTTATTGAGATGAAAAAAGGCTGATCCAAAGTACGGATTTGTATTATCCCCTACAGGTAGCCAACAAAAAAGTGGACATTTGTTATGGTGTTCTTAAGAGTCTACCTGGAAGGGGTTTTTATGACCAAATGTAAATTATCAATTTATCCTTGAATAAGACACCTAAG # Right flank : TACGTGCATCAAAAAGCCTGTAATATGAACGATTACAGGCTTTTTGATCGTTTTAAAAAAAACGTGAGAAGGGGAGAAGAGTTATCCTTCATCCGTTTTTTTAAAAAAGTGACAGTTGCGTTGTTGTAATTGTTTTTTCCTTGGTAGTAGGTTCTCCTAAGAGAAATTGCATTTTTGCATATTGTTTTTCCGTTACGATCATCGCCCGCACTGATCCTTTCGGTGGCAAGTTTCTTTTCAGCCTATTAAGATGTTTATCAGCAGATTCATGCCCATTGCAAATCCGACTATATACGGAAAACTGTAACATATCATATCCTTCGTTCAATAAAAATGTACGAAATTGTCTGTAGTGCCGTTTCTCCCGATTAGTGACGACAGGTAAGTCAAAAAACACAAGTAATCTCATAAACTTACTCATAGGTGTGTATTTGAATAGGAAGAAGTTCCGGCAATTTTAAAAACGAAGGTTTTTCGTTTCGACTAGCTGTTACGAAGCT # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCATAGTTCCCCTGAGGTTATTGCTGTGGTATGAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.30,-1.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [68.3-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0 Confidence: MEDIUM] # Array family : NA // Array 1 62051-61146 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABJUU010000006.1 Anoxybacillus flavithermus strain WS5286 6_76693_30.8685, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 62050 30 100.0 39 .............................. TATTTTCATTTAGAGTTTAGCCAATAGCTCGGCAATTTG 61981 30 100.0 35 .............................. TTTTTTGTCTGACGAAAAATAGTTCGGACGGCACA 61916 30 100.0 39 .............................. CACGCGTCGCAAAACCGCTCCGGGAACAGACTTTCGAGG 61847 30 100.0 36 .............................. CAATCTCCTAAAAGCTAAAACTTTGCGTATAAAACA 61781 30 100.0 36 .............................. TGATGTTGGAGTTATAGCGGCCGGAATTTTGAAAAA 61715 30 100.0 37 .............................. TTTCGTATGTCTTATTTTTGATCTTCTCGACTAGAAG 61648 30 100.0 39 .............................. TTTCGGTGACGCTTCGTCTCGCGCTCAAATACGCATGTA 61579 30 100.0 38 .............................. TCGGATTATCTTCATCTTCTCTATTTTCTAGATCAATC 61511 30 100.0 39 .............................. CAATTAAATTTTTAACTTCAATCATTATTACTTACCCCC 61442 30 100.0 38 .............................. ATCGCTGGGTGGCTCCCTTTGGTAAGCTTTGCCGAGGT 61374 30 100.0 35 .............................. AAAGTGGCTTGAAACCAGTCGACGCAAGCGATCAA 61309 30 100.0 38 .............................. ACTGCTCTTCCAGTCCTTTCGTGATGTTGCCATTTTCA 61241 30 100.0 36 .............................. GTTTGCTCATTTCGTTTCACCTTCCACCTCTTTGTA 61175 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ======================================= ================== 14 30 100.0 37 GTTTGTATCGTACCTATGAGGAATTGAAAC # Left flank : ACGTTGGATGGAAAGAAAAAAACACAGTTTTTTGATCCGGACGACGAAGTGTTTTCACATTTAATAGAACGGAATTTTTATAACAAATATGAAGCATATTACGGTGTTCCACCAAGCGATCGGCTACTCATCGAACCTGTCGATGTTCGAAAATGCGATCGGGTCGTAACGAGCTTTAAAGGCTTTTACATTACAGCGTGGAAAGGGCGGTATAAGCTCATTTCTTCTCCGGAAAATTTAACGTTTTTGTACCGTGTAGGTATCGGTGGACGAAACTCACAAGGATTCGGCATGTTCCGCATCATAAAAGAAAAGTGAAACATTTCACAGCTGTCGTCGACCTCCAATCGTGCAAAAACCCCGGGGGATCGACGACAGTTTATTTTATGCGAATTTTTTAGTGATATCAATAAATACAGAGTATTGACTGAATTTTCGGATGGATATATAATAGAGTTGTATAGCTTTTCCATATGTTGATTTATCAACGCTTTTTTGGG # Right flank : TCGTATTGGTCACTAGTCAGCGCTTCTACAGTAAAAAGTTTGTATAGTACTTAGTTAGTTTGACGTTGGCGGTATTGTGCTTGTCCCTCTTCACTTTCTATATACATCCAAATTGGCATTTTAACCTCTGATTTACGCAGCACACCCGATGCGGCGTAACACCTCATCTGGGTGCTGTAAGACGTGCTGTTCAAAGCGAGTAATGGATTGGGCAATGTCATTTTGATCCTTGTGAAAAACGTTGGCAATCACTTCATCTTTCAACCATTTCCACAGCCATTCAATCGGATTTAACTGTGGAGAATACGGTGGCAAAAAGATGAAATGAAAAGCATCGCCTTCCTCGCCATCAAGAAAGGCTTGCACCATCTTGGCATGATGAATACGCGCATTGTTCAACACAAGCACGAGGAATCGGTCCGTATATTTCTCTTTCAATCGGTGCAAAAAGTCGAGGAACGTTTCGGCATTGGCGGATGATGCGCGATGAAATACCACAT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGTATCGTACCTATGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: R [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.20,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [65.0-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 2 72682-71040 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABJUU010000006.1 Anoxybacillus flavithermus strain WS5286 6_76693_30.8685, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================== ================== 72681 30 100.0 37 .............................. CCGAGGTGCGCGGGAGCGTTTTTCTCCCCGCGCGCCT 72614 30 100.0 39 .............................. CATGGACAAGCCTGTGGGGCGGAAAGGAAAGCGGAGGGA 72545 30 100.0 35 .............................. ATAATGTCGGCGCGTACGTCACTAAGTACATGACG 72480 30 100.0 39 .............................. ATCTCATGATGAGATATTTTTCCTTGTGAAGATGATTGA 72411 30 100.0 37 .............................. CGGATAAGTCCATGTTTCTTCTCTAACTTACCTTTCA 72344 30 100.0 37 .............................. CCGAGGTGCGCGGGAGCGTTTTTCTCCCCGCGCGCCT 72277 30 100.0 39 .............................. CATGGACAAGCCTGTGGGGCGGAAAGGAAAGCGGAGGGA 72208 30 100.0 35 .............................. ATAATGTCGGCGCGTACGTCACTAAGTACATGACG 72143 30 100.0 38 .............................. ATGCTGCAACTGGAAAATGAAAATTCGAGCCCCCGTCG 72075 30 100.0 40 .............................. ACCCTCTAAACGCTGTTTTTGATGAAACTTCTTTTGTACC 72005 30 100.0 36 .............................. CCTTTCTGATTAATATTATAAATGTAAACATTTTAA 71939 30 100.0 39 .............................. TCTTTTGAGGATTGGATACTTTTGTTAAAATCGCTTTTA 71870 30 100.0 37 .............................. GATTTTTTCATACCTTTATTAAGGATTATCGTTAGTT 71803 30 100.0 37 .............................. TAATCCTTTTTTCGTCTGTTGCGTCAAATACGGGCGC 71736 30 100.0 36 .............................. CTTTAATACCTAGACCATTAATCATTTTCTCAATGT 71670 30 100.0 38 .............................. TATTTGTACTAGCATTTTTTATAAACGAGTTGCATACA 71602 30 100.0 38 .............................. GACGCGGAGGTGGCTTCTATTCTGTTTGCGTTACATCA 71534 30 100.0 37 .............................. TCGCGAAAGTCGGAGACGGCAGCGACAATGTCGCGAA 71467 30 100.0 35 .............................. ATAAAGTTGTGGATTTCAGGTTTATTGATCATTAC 71402 30 100.0 37 .............................. TGATTTTGACTTGCTGATTGATTTCTTGCTCGAAGGC 71335 30 100.0 37 .............................. TTCTCCAAAGCAAGTATACAATCTTCAACATCAATCA 71268 30 100.0 37 .............................. TTTGCCTAAATCGACAAACCAAGAACCGACATTTGAA 71201 30 100.0 35 .............................. TGAATAAGTGGATAACATCATCGTCACTCTCAAGT 71136 30 100.0 37 .............................. ACGACATTTGTTCAACTTTTTCATACCATATTTACAA 71069 30 80.0 0 ......................G..TGCCA | ========== ====== ====== ====== ============================== ======================================== ================== 25 30 99.2 37 GTTTGTATCGTACCTATGAGGAATTGAAAC # Left flank : GATGCTATGGATGACATTTATCCTTTACTTGTCCGCTTGTTTCCGATGAAAAAAATAAAGGACAATCAAGTCGATGAATTTGCTCGCTATTTAATCATTAACTACCATTTTGGAGTTCATATTATTCATCGTGATTATGTAAGAATATGCTATGAAATTCGCTCTAGAGATCGTCTTGTTTGGGTAAATATAGAAAACAAAAATAAGAATTCATGCACATATGTACAAGGTGATTTGAATTTATTTGACGAAGTGTACCATATTTATATTGAATTTGAACGTATCATAAGTAAAGTACTGTAAAATCTACTTATTGTGAATTTATTCACAACTGTCGTCGACCTCCAATCGTGCAAAAACCCCGGGGGATCGACGACAGTTTATTTTATGCGAATTTTTTAGTGATATCAATAAATACAGAGTATTGACTGAATTTTCGGATGGATATATAATAGAGTTGTATAGCTTTTCCATATGTTGATTTATCAACGCTTTTTTGG # Right flank : TTGTGATCAGTTTTATATTTACTTTGTAATGTTTTGTGTTAGGGGTAGTTTCCTTAATTTCCTACTAATCCTTTTTATTTTTTAGAGCGCTGGTCAGCTATCCTCAACCTCTGTTTTTATGTTACTTATTTCAAAGAGTTATATTAATTTAGAAGGAATATATTCCTTTTATGTCGTATTTTATGGTAGGTTAGTTTATTTAGAAACGAGGTGTGATTTTGCTAGCAGAAGCAGTTGTTCGAGTAGGCGAGTCGCTTGTGAGTAGTGATTTACCTTTAACGGAGCGTATTCGTTTGTTAACGGATGTAGATAATGAAGCTTGCAAGAATTTTTTTGAGCACGTCTGGGTTGTGGAATGCATAGAGGAACAAGTGAACGTTCGTTTGATGAGAATAGGAGAAAAGGTGAAGGAAGGTAAAAAAGAAACGTTTGTTGTTGATAGAGCTAAAAACGTTGCCTTTCCTATCATTTATCCTAATGGTGGGAATCCGCTAAATGCC # Questionable array : NO Score: 9.22 # Score Detail : 1:0, 2:3, 3:3, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGTATCGTACCTATGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: R [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.20,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.41 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 1 443-186 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABJUU010000070.1 Anoxybacillus flavithermus strain WS5286 70_8664_22.8913, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ===================================== ================== 442 37 100.0 37 ..................................... TGTATTACTTCGATTTCCTTTTTCATTTGACCAGCTC 368 37 100.0 36 ..................................... TTTGTACCAATCTACAGCTTCTTTAACATTGTTAAA 295 37 100.0 36 ..................................... CAACCAAGACCCGTATACACTAGCAAATACTTGCTT 222 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ===================================== ================== 4 37 100.0 37 GTTGCACCCAGCATAAAAGCTGGGTGAGGATTGAAAC # Left flank : TGACATATGATGTTGAGACATTGGAGTCAGATGGTCAAAAACGATTACGAAAAGTAGCAACTATTTGTCAAAATTTTGGACAACGTGTGCAAAAATCTGTTTTCGAGTGTAATGTCAGCCAAGCGCAGTTGGAAGAAATGGAACATCAATTGTTGAAAGTTATTGATCTAGAAAAAGATAGCTTACGAATATATACGTTATATGGTCAACGATCCAAAGCAGTTCGCTCCTATGGAAAGGACCATTACATTGATTATAATGATCCGATTATTTTGTAAGAGTAGAACATATACAATATGTGTAGCAGTTATGAATTTTGGTGCGCGAACATAAAGCAATAGTAAACAATCAGGAGGATCGCGATGAGTAAAAAAGGCTTAGTAAAGCGAAGATCCAAAAATTCATCAGAGACTATCTTTAGCCACAATGCACACCAGACAAAACAGTTCGCGTTTTTATACTTTTACACTTGCTTCACGCATAGGATTGAAGCGTAGGCA # Right flank : CATTTTTATCGCTCCTTTTGTGGTGTGTTCTTATTTATAACTGTAGTTGAGCAATTTTCGTTACAATAATTACCATTTAAAAAGAGACAAACAGGGTACCCCTTATGCCACGTGGAGCTGTTTTTTCACGGTATCAATGGGAATATTTTGTTTTGCTGCACGATAAATGAACTCCACGAGGCTATG # Questionable array : NO Score: 5.86 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGCACCCAGCATAAAAGCTGGGTGAGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.35%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-13.20,-12.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [68.3-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.5 Confidence: HIGH] # Array family : NA // Array 1 3069-3842 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABJUU010000001.1 Anoxybacillus flavithermus strain WS5286 1_210012_27.8091, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 3069 30 100.0 37 .............................. ATCAACTCTCTAACAATATTCCAATCACCTCCAGCAA 3136 30 100.0 39 .............................. GGATAAAAAAATTTTTAAAAAAGGTAAAAAAAGATTTGC 3205 30 100.0 37 .............................. ACTTTGTTTTTGTGTGTCAAGCTGATCGTATGATTGA 3272 30 100.0 37 .............................. TCGGCTATCGTCATAATTCAGCGAATGCGAAGTTGGC 3339 30 100.0 38 .............................. TAAGCGGACGGTATAAGGGATAGTGTAATTATGTGCAA 3407 30 100.0 38 .............................. TTCTGAAAATCCAATGTCCCGCGTTTTCGGCTTCCGAG 3475 30 100.0 39 .............................. CCTGGTTCAAATCGGTAATTTTGCTTCCATCTGCTTTTA 3544 30 100.0 36 .............................. AGAAAATCGTTTATCATTGCTTGAGCGTCTGCTTCA 3610 30 100.0 37 .............................. ATATTAAGGAGGACGGAGGAAAGGTTTTTTTTTCGGC 3677 30 100.0 39 .............................. TCAGACTCCAGCCGATCAACCGATCCAACAGGTTGAACA 3746 30 100.0 37 .............................. ATGTACCCCATGTACATAAGTCATAGGCGATGAATTA 3813 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ======================================= ================== 12 30 100.0 38 ATTTGTATCGTACCTATGAGGAATTGAAAC # Left flank : TATTGTTTGGCTTTTTTGAAACATATGTGAAATTATCAGACGAAGAAGAACGAAGACTGCGAAGCGAGGTGAATGAAATGGAGACGAAAGAAAAAGAACAAGTGATGGAGTTGATTATTTCGTATGAACAAAAGGCGTTGGAAAAGGGAAGAGAAGAAGGGATAGAACAAGGAATCAAACAAGGAATCAAACAAGGGATGAAGCACCTTGTACAAACGATGGCCAAAAAAGGGATGAGTGTAGAAGATATCGCAAACATCACAGACCTTGCGGAAGATGAAGTGCGTGAGTTGTTAGAAAAGGAATAAGTAATTTGCGCATAATTTCACAACCGTCGTCGACCTCCAATCTTGCAAAAACCCCAGGGGATCGACGACAATTTGTTTTTTGCAACTTTTTTAGACGTATCAACGCATCAAGACGATTGACAGAATTTTCGAATGTATGTATAATGACATTGTATAGCTTTTCCAAGTATTGATTTATCAGCACTTTTTGGG # Right flank : CACCTTTGTAAAAATTCTTCAATTACTTGAGCTTTTTCGTTTGGTTTGTATCGTACCTACAAGAACCAGTATGTTAGGGTCTGGATTTTTTTGTATATACCATTTTACTTTTTCTTTAACATTTGTTATAATATAAGGTAGAGAACATCTTTCTTTCCGATTATGGTAAAGTGAGATGTTTTTTTCGTGGAAATATTGATTTCACAAAGAAATGGAGGGATTTCTGATGAAGAAATACGCCATTGTGTATTGTGAACATCAATTTGGTTCCATGGATGGAAAAACAGCGAATGGGCTTGTGCGCGATTCAGGGCTGTATGAGATCGTTGCAGTCATTGATTCGACAAAAGCTGGTCAAGATGCCGGAGAGGTGCTTGATCAAAAGAAAAATGGCATTCCGATTTGTAAAAACCTTCAAGATGCAATAGCCTCCGCAAAAGAAAAACCGAACTACTTCATCTTAGGAATTGCTCCAGCGAACGCTTTTCTCAAAAAAGAAG # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTGTATCGTACCTATGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: F [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.60,-0.20] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [70.0-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9,0 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], //