Array 1 83953-84171 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_AFTQ01000078.1 Staphylococcus aureus subsp. aureus 21235 contig00047, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence               	Spacer_Sequence                     	Insertion/Deletion
==========	======	======	======	==============================	====================================	==================
     83953	    30	 100.0	    36	..............................	TTGATGCGTAGCATCCAACTGTATTCCTCTATTTTA	
     84019	    30	 100.0	    36	..............................	TTGATGCGCAGCATCCAACTGTGTTCCTCTATTTTT	
     84085	    30	  93.3	    27	.............A...............T	GCGCTTAGCGCAGGCGCTCCTATTTTT         	
     84142	    30	 100.0	     0	..............................	|                                   	
==========	======	======	======	==============================	====================================	==================
         4	    30	  98.3	    33	CAACTTTAGTTGTTAGGGGCTCTTATGCAG	                                    	       

# Left flank :   ATCAACTAACGATAAAGTAAAAACACACTTAGCTAATGGATTTAAAGCAATGAAAAATGGCCAAAAAACATTTTTCAAATTTTTCATTGGAATACTATTATTAAACTTAATTATTATTTTATTTAAAACACCTGTTGGTTACTTGATTTCATTTAATACGCAATCACTCTCTCAAAGTGTTGCAGAAAATATCATAAGAGTTTATACAGTAATGACAATCATTTTATTCGTTGTTATTCATGCAATCATTTTAATGGGTATCGTTCAATATTACTTAAAACGTGGTCAAAAAATTACTAAAGATAAAGTAAAAACAGCTGACAAGGATAAAAAAGTTGTCACTGAACCAAAAAATACAAAAGTAGAAAACGATAAAGTGACAACATCTGTTGAAACAAAAACAGAAAAAGCACAAGATTCATTAATTGATAATACAACAAAAACAATGACTTCAGATAAACCAGAAGACAATCAACCAAAATAAATTTTAGAGCCCCTTA
# Right flank :  GAAGTTCCTATTTTTAATACAGCTATAGTTGATGTCATATGATATTTTAATATTAGTTTAAACTTACATCCACTCAACATAAAAAGGAGAGGTAAAGATGACATATGGTTCAATCATCGCTATCGTTTGTGCACTATTTGCAATCTTCTTTATACCGTATATGGAAAAGAACAATAAAAAGAAGAAATAACACAAGCGTCTGGATTTCTAGTATACAAGAGGCTGGGACATAATTCCCTAAAAACAGCAGTAAGATGTTTTTCAATCAGAAAATATCTTACTGCTCTTTTGTATATTGCTCATCAACTATTTTGAATTTATTATTTAATCAGCTAAAAAATGCTTTGCTAAATATTTTGCTGCGCCATCCTCTTCATTCGTGTATGCTGTTACATCTGAAGTTAATGCTTGGATTTCAGGGCGTGCATTTTTCATTGCGACTGTGTAATGTCCAAATTCAAACATGGCTCTATCATTATCACTATCACCAATGACTAACG

# Questionable array : NO	 Score: 2.52
# 	Score Detail : 1:0, 2:0, 3:0, 4:0.91, 5:0, 6:0.25, 7:-0.04, 8:0.4, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     CAACTTTAGTTGTTAGGGGCTCTTATGCAG
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:56.67%AT]
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  NA [-0.80,0.00] Score: 0/0.37
# 	Array degeneracy analysis prediction:      F [0-2] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: R [68.3-80.0]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [0.41,0.27   Confidence: LOW] 

# Array family : NA
//