Array 1 19783-20741 **** Predicted by CRISPRDetect 2.4 *** >NZ_WBQO01000004.1 Staphylococcus epidermidis strain SE48 NODE_4_length_205300_cov_94.718_ID_2945, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 19783 36 100.0 30 .................................... CATCTTACCTTGCTATTATGACGGTAAACA 19849 36 100.0 30 .................................... TATCTTTTATGTTGGAACCAAATTCAACTG 19915 36 100.0 30 .................................... TTGTAAAAGCTAAAAATGAGGAAGAACTGT 19981 36 100.0 30 .................................... CAACCGAAATAGAACAAGCTATAAAAAATA 20047 36 100.0 30 .................................... GAAAAATTCATTCACTCAATGGGAAATCAA 20113 36 100.0 30 .................................... TGTTTATTCAGTTTTGTGATTTATATAATA 20179 36 100.0 30 .................................... GATAAGACGTTTACTCATAACAGAAACAGC 20245 36 100.0 30 .................................... TCTTGCCTCTTTGAACAGACCAGAATACAC 20311 36 100.0 30 .................................... TGTTTATTCAGTTTTGTGATTTATATAATA 20377 36 100.0 30 .................................... AAATCGCTCATGCGCATCACTACACAGAGG 20443 36 100.0 30 .................................... GTCTCTCGGACGTTGGTTCGGTTGGCTAGG 20509 36 100.0 30 .................................... ATATGAACACATTAAGCGGTTTAGATAAAA 20575 36 100.0 30 .................................... TTATCTTCATCATTTGGACAAGCCCACATG 20641 36 100.0 30 .................................... ATAAACCAGTCATACCTCTTGCCCAGTATA 20707 35 94.4 0 ...............-...................C | ========== ====== ====== ====== ==================================== ============================== ================== 15 36 99.6 30 GTTTTAGTACTCTGTAATTTTAGGTATAAGGTATAT # Left flank : ATTATCAAGCAAAAGAAAAATCATTTGTAATCTATTTATATCCAGAAGCTGGTCTTAGCATTAAAGAACAAATAAGATTTAGGAAAATACTAAATAACTTACCTGTTCCGGTCATTGTTTTAACCGAATCACCCCGTTTTTTATCTGAAAGTATTAAGGGACTAAATTATTTTATTAATAATATTCAAATGATTACAGAATCTTTTTTTGAAGATAGCTATTGGAATGCGCCAATTAATGTGGAAAAAGAACGGATTAAAGAGAGGTTTGAGTATTTATTTGTAAAATATTGTTCAGTTTTAGAAATAAAACCGATTATCTCTAACTACTTGCTTGCGGATATTATTGTTTTTAATGATATTGATCTTTATATCATTGTTTCATTTTTAAAACATTGTAATTTAGAATATCAATTAGATATCGATAAAACAAAAATTTCATTAGCGTTATCAACTTATCTATTTTCTTAATTATAATTCAAGGTTATAATTGTGCTAGAG # Right flank : CCCTTTCTTGAATGTCATTTCTAAGTTGTTTGCAACAGTTTATGGTTATTTAGAGAGCATAGTAATGAAAAATGGGATTTAGTACCAAAAGCAGGACGCTCACCATATGATAAATATAATGACGAGGAAACTTTTTATGCGTGGAAACGACAGGCTATGATATTTCTGAAAGAATCATACAATGATTGGGATATGTTAACGATTGCACAATATCATGGGTTAGCGACGAGGCTATTAGATTGGAGTTTCAATCCATTAGTAGCAGCTTATTTCGCTGTGAAAGACTTTGAGGATTGTGATGCTGTTATTTATGCTTATTTGAAAAAATCAGATATTAATGTCAAGGAAGTACATCCAATTGAGAGTAAGGGAATAAAGAAAGTGAAACCAAATGGACTAGCAACAAGAGTAGTAAGACAAAGTGGTATTTTCACAATTCATGAACAACCAACTGCGTCTATTGAAGATAACTTATCGAAAAAAGAAAAATTAAATAAAAT # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGTACTCTGTAATTTTAGGTATAAGGTATAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.00%AT] # Reference repeat match prediction: F [matched GTTTTAGTACTCTGTAATTTTAGGTATAAGTGATTC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.60,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //