Array 1 17627-16560 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB895847.1 Micromonospora sp. CNB394 C569DRAFT_scaffold00023.23, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 17626 30 100.0 31 .............................. CGCGGGCGTGGTTCCTCGTCCCTGGCGGCGG 17565 30 100.0 31 .............................. CGGTCGATCCGGAGCAGGATCCGGAGGGGTG 17504 30 96.7 31 ............................C. TCGGCTGGGGCGGCGTGTACACGGCGTCGGC 17443 30 100.0 31 .............................. ACGCCGCGGTGCTCGACCAGCTTGCCGCCGC 17382 30 100.0 31 .............................. CCCGCCAACTCCGCCGACATGGCCCGCCGCC 17321 30 100.0 31 .............................. CCGACCCGTCGTGCTTCGACCAGGTGAACTA 17260 30 96.7 31 .............................G GCCACGCCCGGCATCCGATGTACCGGTGGAT 17199 30 96.7 31 .............................G CTTCGCCCGCCTCGGCGCGCTCGCCGACGGC 17138 30 96.7 31 .............................A TGCCTCTGACGACTCCCGGGAGGCCGGGGCC 17077 30 96.7 31 ..........T................... GATCTGGGCCGGCAACCGGGTCGCGATGGAC 17016 30 90.0 31 ....................AA.......G GCATCGAGCCCCGGCAGATGACCAATCGAGA 16955 30 96.7 31 .............................G CCACGCCCCAGGAGCTGGCGGAGACGACGCC 16894 30 93.3 31 ..T..........................T ACATCGGCTAGGCCGGGATGATGAGCGTCGC 16833 30 96.7 31 .............................G GGTTGCGGTAGGAGTGCCATCCCTCGGCCCG 16772 30 93.3 31 ..........T..................G ATCTCCGAGGCAAGCGAGACAAGCAGGGCAA 16711 30 90.0 31 ..G...........T..............T CCGACTGCCACGCCGCCCGCACCGTGTCCGG 16650 30 96.7 31 A............................. GATCAGCAGCATCGGAACCGCCAGCAGGCAC 16589 30 93.3 0 ...A...................A...... | ========== ====== ====== ====== ============================== =============================== ================== 18 30 96.3 31 GTCCTCCCCACGCACGTGGGGGTGCTCCGC # Left flank : CGCCGACATCCAGCGCCTGCTCGACCCCGACAGCGCAGCCAAGCAGCGTCAACCCGCTGCCGAAGTCACCTCGCTCTGGGATCCAGAGATGGGCGCCATGCCGTCCGGGGTCAACTACGGCTCGGACCCCTGGGACTGACATGGCCTCGATGGTCGTCCTCGCCACCACCGCCGTCCCCGACCACCTGCGAGGCGCACTCAGCCGCTGGATGATCGAAGTGACCCCCGGCATATTCGTCGGCACGCTCTCGGCCAAAGTCCGCGACGAACTCTGGAATGCCGCAAGCGCCGTTGTGGGCGACGGCGCTGCCGTCCTCATCCATCCGGACGACACCGAACAAGGCTTCTCGCTACGGACAGCAGGAGAGCGCCGACGCCGCCCGCTCGACTTCGACGGCCTCACCCTCGTGGCGATGAGCCCCAAGGAAGACCAACGCGCCGTCGAAGAGCCGGTCGAAGAAATCTGGCCGGAAGGCTGGTAAAGCCGCAGCTCGCGAAGT # Right flank : AGCTGGGGGCGAGGGAAGGAGCCGGAGAGTCCTCCCATGCTGTATCGGCTGGTCGTACACCCGTACAACCGGTCATCGGCAACTATAGTTGACTCTGGGCAAAGCGGTCGGCAAGGAGCTGTCGGACCGGGGACGGATTCCGCGGACATCGTGGCCGAGTATCAGGAGCAGGCAGGGCGCTGACCAGGCGCCCAGTTCTGTGACTTCCGAGGTGCCGCATCCCGCGGCCAACGGCGCGGCGGCACGTTCGATCCGCGGCGGGCCGTCAGCGTGCTCGCCGTCGCGGCATGTCGCCGCCGCCGGCCTGGCGAGGAGGCAGCCCGCCTTGCAGTTCGCGCCACTGGCCGGCGGCGTCAGCATTCAGAAGACGGTCGACCATCGTGTCGGCTTCGTCGCGTGAGTCGTACGTCCAGAGCAGCATCTTCCCCGTCTCGGTGTCGCCGGCGCGGGCGACGACCTTCCATCGCGTCTGGCGGATCAGCCACACGTCGCGCCGGCTC # Questionable array : NO Score: 5.48 # Score Detail : 1:0, 2:3, 3:0, 4:0.81, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.41, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCTCCCCACGCACGTGGGGGTGCTCCGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCCTCCCCACGCACGTGGGGGTGCTCCGC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.80,-11.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [35.0-40.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 26589-27533 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB895847.1 Micromonospora sp. CNB394 C569DRAFT_scaffold00023.23, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 26589 30 96.7 31 .............................G TGCCGTCGCCTTCGTCGTCGCGGACCCACGT 26650 30 100.0 31 .............................. TGCGCCTGTCCCGGGATCCGCGTATCGGCTA 26711 30 100.0 31 .............................. ACACGTGCGCGGCCGGTGAGACGACGGCGGG 26772 30 96.7 31 .............................G TGACGATTCCCGCTGTCGAGCCCTGCCTGTA 26833 30 96.7 31 .............................T CACCGCCCCGGTCCGCACCTACGAATACCGG 26894 30 96.7 31 .............................T GACCACCGGCCGTCCCGGATATGCCGGCCAC 26955 30 96.7 31 .............................G ACTCACCCCCTAGCCCGCGACACGTCGGGAA 27016 30 100.0 31 .............................. GGTGCACATCCTTACCGGGGGTGTAGCCGGG 27077 30 100.0 31 .............................. CGTTGACGGTGCCGCTGCCGCCGCAGTAGCC 27138 30 96.7 31 .............................T CTCGCAGACCTCGCGGCCAACGGTCGACAGC 27199 30 96.7 31 .............................G CGAGGCGTGCGGCCTGCTGCGTGCCGGTGAG 27260 30 100.0 31 .............................. CGACCGCAGGCGGCGCGCCCACGACGCGGTC 27321 30 100.0 31 .............................. CCCTGCTTGTCCCGACCGGCCGCCGCGCAGG 27382 30 96.7 31 .............................G AAAGGCGGTGCGCGACGACCACGGGTAGTCG 27443 30 96.7 31 .............................T CAACATGCAGTACGTGCGGCGCATCGAATGC 27504 30 96.7 0 .............................N | ========== ====== ====== ====== ============================== =============================== ================== 16 30 97.9 31 GTCCTCCCCACGCACGTGGGGGTGCTCCGC # Left flank : CCGAGAAGCCCCAGAAGATCAGGTAGGGACAACTGGCCAGCTGCATCGTGCCGCAGCGAGCCATCGCCTGCGGCGTCCTCATAAATGCCACAAGCGAGCAGCGCCCCGAAGGCGGCCCTGTTCTTCTTCTGGAAGCCGGGCGTCGCCTTACCGACGTCGTGCAGCCCGGCCCAGAACATTACCAACGACCTGGCGTGGCAGTCGCTGGTGTTAAGCCCTTCCGCAATGACGCGTCGCTGATTCGGGGTCAGGTAACGGTCCCACAGATCCCCGGCAACAGCAGCCGTGTCGATCAAGTGCCAGAGCAACGGGTACGGCTTCAGGAGCTGGCTAGACTTGCCCCAGATCCCGGCGTCGACCGCTTCATCGAAACTCAAACCGAACACCTCCGCTCCACATCCGCTCGTAAGGGCCCCCGCATGCAACCACGGACGTCCGACACTTCAGCCCGCCCAGCGCAAAACTGCGCAGCGGGCGGATAAAGCCGCTGGTGGCGAAGT # Right flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTCCTCCCCACGCACGTGGGGGTGCTCCGTCAACATGCAGTACGTGCGGCGCATCGAATGCGTCCTCCCCACGCACGTGGGGGTGCTCCGGCCCGCGAGATCATCGGCGTGCGGCAGCAGGTGTCCTCCCCACGCACGTGGGGGTGCTCCGTCCATGCGTTCCTCCTGGTGGTGGGCGGTTGGGTCCTCCCCACGCACGTGGGGGTGCTCCGGAGTACCGGGCGTACACCGACTGCGGGGTGATGTCCTCCCCACGCACGTGGGGGTGCTCCGTCGTCGGTGACGAGCTGGTGCCGGCCGGCGTAGTCCTCCCCACGCACGTGGGGGTGCTCCGTAGAGGACGGCCTGCGGCACGTCCGGATCCGGGTCCTCCCCACGCACGTGGGGGTGCTCCGCTGCT # Questionable array : NO Score: 5.85 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCTCCCCACGCACGTGGGGGTGCTCCGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCCTCCCCACGCACGTGGGGGTGCTCCGC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.50,-10.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [35.0-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 3 27633-30821 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB895847.1 Micromonospora sp. CNB394 C569DRAFT_scaffold00023.23, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================================================================== ================== 27633 30 96.7 31 .............................T CAACATGCAGTACGTGCGGCGCATCGAATGC 27694 30 100.0 31 .............................. CCCGCGAGATCATCGGCGTGCGGCAGCAGGT 27755 30 96.7 31 .............................T CCATGCGTTCCTCCTGGTGGTGGGCGGTTGG 27816 30 100.0 31 .............................. AGTACCGGGCGTACACCGACTGCGGGGTGAT 27877 30 96.7 31 .............................T CGTCGGTGACGAGCTGGTGCCGGCCGGCGTA 27938 30 96.7 31 .............................T AGAGGACGGCCTGCGGCACGTCCGGATCCGG 27999 30 96.7 31 .............................C TGCTCATCGGGTACCCCCGACCAGGGCGAAG 28060 30 96.7 31 .............................C GGCTGCCTGACCGGCCGTTCCTGGAGCCGGC 28121 30 100.0 31 .............................. GGTTCGCGTCGCTGTTCGTGGCGTTCATGCC 28182 30 93.3 31 .....A.......................A TGCACTTACCGTCGACGCGTTGGAGGTTGTT 28243 30 96.7 31 ................C............. AACCCACGCTCGCGCGTACCGTCGTCGACCA 28304 30 100.0 31 .............................. TCCGCTGGTCGATGTCGGTGCCGATGCGCTG 28365 30 96.7 31 .............................C GGTGGAGGTCGGCGGCGACGGCTCCTCCGTG 28426 30 100.0 31 .............................. CGGGCCGGCTCCGTAAGACGCGGATGGTGGA 28487 30 96.7 31 ...............C.............. TGAGTAGGTCATGAGTGACGTGCCCGGTCGG 28548 30 96.7 31 .............................T AGCAGCACCGGCCTTGCGCCGCTGTCTCAAT 28609 30 96.7 31 .............................C TGCTCGGCACCGCTCCCGGTCAGGGCTCGCT 28670 30 100.0 31 .............................. CGGCACGTCCACCATTCAGATCCTGAAGGGC 28731 30 96.7 31 .............................C GTTCGCGGTAGGTGGGTGACTGCGCCTGCTC 28792 30 96.7 31 .............................T CGGCGCCGGTGCGCCGGTGCTCGACCCTGAC 28853 30 100.0 31 .............................. CCCGCGCCGCGTTCATCGACCGATTCGAGCG 28914 30 96.7 31 .............................C GCCGCTGCCGAGGGCGAGGAGCCTCCCCGGT 28975 30 100.0 31 .............................. GCCAGCCGGACGTGGACGGCGTCGCCTACTT 29036 30 96.7 31 .............................A ACCCTGCGCGCGGGTCGGCGGGGACCATCTC 29097 30 96.7 31 .............................C GAGAGCTGGCCGGCTGACAGCCGCCCTACGC 29158 30 96.7 31 .............................C AGTGGGTCGACAGCGACGTGTCCCGGGATGC 29219 30 96.7 31 .............................A AGCCGCAGACCAGCGCGCCGGAGCGCGACGG 29280 30 100.0 31 .............................. CGGGTGCCTGATCATGGCCGACTACGCGCCG 29341 30 100.0 31 .............................. GGCGACGGTGGCTGACACCGTGCACGTCCTC 29402 30 96.7 31 .............................T CGGCGGCGGTGCGGCGGTGCTCGACCCGGAC 29463 30 100.0 31 .............................. TGCGCAAGACGGCGTCCTGACCCTCGTCGCC 29524 30 100.0 31 .............................. GCTCGCGGACCACTGTGGCCGGGACGGTGAC 29585 30 96.7 31 .............................C AGTCAGTGCCGGCCGACGGCGTGTACCGGGC 29646 30 96.7 31 .............................A CACCTGCCGCCGCTGCCCCGTCACCACGGCC 29707 30 93.3 31 .......................C.....C AGGCCGGCGCCATCGAGTCCGTTCTCGCCGC 29768 30 100.0 31 .............................. AAACAGGTGCCACTCATGTCCGCACCCACCA 29829 30 96.7 31 .............................T GCGCGAGGTGGTTCACCCCGAAGTGCATCTC 29890 30 100.0 31 .............................. TGTCCCGCTGGCTCACCCACGGCCCCCGCTC 29951 30 100.0 31 .............................. CGGCACGTCCACCATTCAGATCCTGAAGGGC 30012 30 96.7 31 .............................C CGGGCACGAAGCGCAAACCCCGGCAGGCCCC 30073 30 96.7 31 .............................C GGTCAGCAGTCGCGGGTCCGCCAGCGGCGGT 30134 30 96.7 31 .............................A ACGGTAGCGACCTGCAAGCGGGCGCTGTGGC 30195 30 100.0 31 .............................. CCCGGGTCGTGCCCACGCACCCGCTGATCTG 30256 30 96.7 31 .............................C GGCTGGGGGCAGCGATGACGCTGGAGGTGGT 30317 30 96.7 31 .............................C CGCCCGCGGAGCGGTCCCTCGATGAGTTCCC 30378 30 96.7 31 .............................C GTACGCGGAGGAGATAGAAGCCGACCTGGTC 30439 30 100.0 30 .............................. TGCGCTGTAGTTGCCCAGTTCGTAGGGGCC G [30461] 30500 30 96.7 31 .............................C GGGTGACGTGGTAGGCGAGGGTGTAGCCGGC 30561 30 100.0 31 .............................. TGGGTGACTGAGCATGGCGACCATGGCTCTC 30622 29 86.7 26 ................-C.........T.A ACGTCTGCCAACCTCTGTCGTACATC 30677 30 86.7 85 CC..................C......T.. AGCCCGCCCAGCCGTCGCAGAGGCTGACGTGCCCTCCCTCCCCACGCACGCATACACGGTCCGAGTTCACTGACGTTCAATCCGT 30792 30 80.0 0 ..T............C...A..C..G...T | ========== ====== ====== ====== ============================== ===================================================================================== ================== 52 30 97.0 32 GTCCTCCCCACGCACGTGGGGGTGCTCCGG # Left flank : TAGCCGTCCTCCCCACGCACGTGGGGGTGCTCCGTCTCGCAGACCTCGCGGCCAACGGTCGACAGCGTCCTCCCCACGCACGTGGGGGTGCTCCGGCGAGGCGTGCGGCCTGCTGCGTGCCGGTGAGGTCCTCCCCACGCACGTGGGGGTGCTCCGCCGACCGCAGGCGGCGCGCCCACGACGCGGTCGTCCTCCCCACGCACGTGGGGGTGCTCCGCCCCTGCTTGTCCCGACCGGCCGCCGCGCAGGGTCCTCCCCACGCACGTGGGGGTGCTCCGGAAAGGCGGTGCGCGACGACCACGGGTAGTCGGTCCTCCCCACGCACGTGGGGGTGCTCCGTCAACATGCAGTACGTGCGGCGCATCGAATGCGTCCTCCCCACGCACGTGGGGGTGCTCCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Right flank : TCCACGATGTGTCATCGGGCCTATCCCGTGCGATTCATCCATCGACAGTGCAGCGAGGCTGCTCCAGCTGAAGCGATCGCCGGCAGCACTGCTACGGCGGCGAGTGCGGCGGGCAGTCCCCATGGCTGCCACAGCGCCGAACACACGGATGCGCCGACTGCGCCTCCGGTGAAAGAGATGAGGTTCAGCAGGCCGAGCGCGCCGCCTCGTTGCCGGGGGTCGACACGAGCGGTGATGGCGGCTGTCAGGGTGGTCTGCGCGATGGCGAACGCGGCAAACGCGGCCGTCGTCGCGCAGATCAGTGCTACCGGGCGGCGGTCCCATGCGGCGAGTAGCAGGCTGGCGCTGAACAGCGCTGTCACGCCAGTCAGTACCCTTCGGCGCGCGGTGTCGCTCGCGGCACGGCCGACGAGGCGGGCCGTCGCTGCTGCCACGATCGCGCTAGGCATCAGCAGCAGCCCGATGCCCTCAGCGGAGTAGCCGAGGCGGGTGAGGATCTG # Questionable array : NO Score: 5.48 # Score Detail : 1:0, 2:3, 3:0, 4:0.85, 5:0, 6:0.25, 7:-0.07, 8:1, 9:0.45, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCTCCCCACGCACGTGGGGGTGCTCCGG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCCTCCCCACGCACGTGGGGGTGCTCCGC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.50,-10.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [3-19] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [0.0-41.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.64 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //