Array 1 55012-57243 **** Predicted by CRISPRDetect 2.4 *** >NZ_QAHJ01000003.1 Lactobacillus helveticus strain DS12_8 DS12_8_3_length_88781_cov_34.510682, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 55012 32 100.0 34 ................................ AATGACTGATGAACAAAAGACAGCATTGAAGAAT 55078 32 100.0 36 ................................ TGTTCAGCTCTATCTTGATGTCAAAGATCCTAACGG 55146 32 100.0 36 ................................ ATTCTGTAAGGACTGAAACACAAACTCTAAAATATA 55214 32 100.0 34 ................................ ATCGTTATGCAGGTATTACTACTGCTACTAATAC 55280 32 100.0 35 ................................ TCAGGAGATACTGCCGTTGGCTTTGAAGATAAATA 55347 32 100.0 35 ................................ AATTCATTACTGGCATTACTCCAGTCACTGCGCCA 55414 32 100.0 35 ................................ GAAAGGAAATATATATGTCAGTCAAAGTTAATGGT 55481 32 100.0 35 ................................ GATTTTGTTAGAAAATTAACCGATGATTTTTTACA 55548 32 100.0 34 ................................ TACCCACCTAGCTTAGCACCTACATGGAATGACA 55614 32 100.0 36 ................................ CATTGTAGTAAAAGTTGCAGGGTCTTGAGTAAGAAC 55682 32 100.0 34 ................................ AATTAAGTCTAATCATAGGGGCAATAATTGCTTA 55748 32 100.0 35 ................................ TTTTTCGTCTTCTGCTCCTAGTGACTTAGTGAGCC 55815 32 100.0 34 ................................ AAGTGAATCGACAGGTATTGCAGATGATGATTTA 55881 32 100.0 35 ................................ AAGATGTGGAAGAGTGCAAGCACACACAGTCCCAA 55948 32 100.0 34 ................................ TTAGAATACTTATGATCCTTAGATAGATGAACCG 56014 32 100.0 35 ................................ CTCTGATCTGCTCAGCACGTTGCTCTTGCTTTGAA 56081 32 100.0 35 ................................ GATTATTCGGAACAACAGATGATCCTAAATGCTCA 56148 32 100.0 35 ................................ CTAAAGCATACTTAGTAGCATATGAACTGGCTGAC 56215 32 100.0 34 ................................ TACAAACACTTGCCAACTTATAATCCACAAATGC 56281 32 100.0 34 ................................ AAAGGTGTGTGGATACCTGCTGAATATTGGTTAG 56347 32 100.0 35 ................................ AGCATCAACGGCTCTAATTATGTCATTGCCGGTTT 56414 32 100.0 34 ................................ ACCTGATCAAACGTTAGGCAATAGATTAACCGAA 56480 32 100.0 34 ................................ TTTACGAATGTCTTGCCAATTAGTATATTTACTT 56546 32 100.0 34 ................................ AGAATCAAGACCACCTGTTAGCGTTTTACCACCG 56612 32 100.0 35 ................................ AAAGAACATAGTTTGCAGAACTGTTTCCAAGTAAA 56679 32 100.0 36 ................................ GGCTTTAGATGCGTCAAATGCCGCCTGTGGGCTATC 56747 32 100.0 34 ................................ AGAAGATGGATACAATTTTTAGAAATTCCAGTCT 56813 32 100.0 35 ................................ ACACCATATGTGGTCAACGCTTTAATTGGATTACG 56880 32 100.0 34 ................................ ACTAACTGGAACATCCAAGTACTGTGCGGAAACC 56946 32 100.0 35 ................................ ATCGGCTAATTGCTTTTCAAGTGAATCAGCCTTTG 57013 32 100.0 34 ................................ ACTGAGACGCTAGACGCTATTAGATCACAGTCAC 57079 32 100.0 35 ................................ ATCAAGCTTGCCAACGGGTCGATTTTATTCTGTGA 57146 32 100.0 34 ................................ TTTTGAATAGATGGCATGTAAGTCTGATATAGTT 57212 32 96.9 0 ...........C.................... | ========== ====== ====== ====== ================================ ==================================== ================== 34 32 99.9 35 GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT # Left flank : GGAGATCTTGACGAATACCCACCGTTTATGTGGAAGTAGGTATGCAGCATGATGGTAGTAGTTAGTTACGATATTAATACGGAAAGTAAATCTGGTCAGCGAAGGTTACGTCATGTAGCCAAAATATGCTTAGATTATGGACAACGAGTTCAAAATTCCGTTTTTGAATGTAAAGTTAATTCGATGCAATTAGAGTTGATGAAAGAAAGACTACTAGACGAAATCGATGATAGCCAAGATAGTTTGTATTTTTTTAATTTAGGGAAGAATTATAAAAATAGAATTAAGTCATATGGAATTAAAGAGGTTATAAATTTAGAATCGCCTGTAATATTTTGATATCGGTGCGAACTGTATGTGAACATGCTTTTAGTGAAGATTCGCACCAATTTTAAACAGGTGAAAAGTGATCTTTTGATAAAAAATATATTTTTATCAGGGTAAGTTAATTTGAAGCCCAATATTTAGAAATGAATTGAAATCATGATCTAAATATTGCG # Right flank : TTTTAGGTCCATTGCACTCTTGCCAGTGAAGTCGTGTCGCACTCCTTGTGATGCACTTGTGGGTGTATTAGTCGGCTTCTTCAACCCAGGCTTGAAGTACTAATTATTAAGAGGAGATTATTCAGATGACAATCGAAGAGATGCAAAAAGGCTATCAAAATGAAGTTGCTTATCAAAAACATATGCTTCGCAATCTAGGCTATTGATTCCAACTCTTTTTAACAGTTAGTGCGATTGGTTTGGTTTTAATTTACTATTTCCATCAATCAACTATGTGGCTCTTTATAATCGGAATTATTCTGATGGTCGCCGGTGTTTTAGGAATGTTTGCTTTTGGCTATGCTTCTTGGCGCGGACGGCAGAATGTCACTCTGGTAATCGAAGACTATGAGAAAAAGATTGCAGAAATTAAAAAGTTAGATCAAAATGCTTCCGGAACGGAAAAGATCCGTTTCAAATGATTCTTATATGAATAAAACAATTTCCCCTTCTCTAGAAAT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [6,10] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCACTCTTAGTGAGTGCGTGGATTGAAAT with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.50,-2.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [73.3-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [10.05,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //