Array 1 1090819-1085012 **** Predicted by CRISPRDetect 2.4 *** >NZ_AP024484.1 Prevotella sp. WR041 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 1090818 30 100.0 35 .............................. ATAGGAATTACTTCCCATCCTTTGCTTCTTAATAT 1090753 30 100.0 35 .............................. AAAAGAAATCGCCCTAGCTAAATCAGAATATAATG 1090688 30 100.0 35 .............................. TTTAACTAGTTATTTAAACAATACAACTATGAAAC 1090623 30 100.0 34 .............................. CGGTTATATGCCTACTAATGGAACTCTTAGAGAG 1090559 30 100.0 34 .............................. TGGATAAAAAGAAAACAGAAAAAGGAAAGATTTA 1090495 30 100.0 34 .............................. CTAGTATATTGTTACCGTCTTTAATTAATAGGCT 1090431 30 100.0 34 .............................. TTTATTGCAACACTAGCGTTTTTCTCATTTTTAA 1090367 30 100.0 38 .............................. CTATCTTATTATATCTATTATATATTAATAGTCTTACA 1090299 30 100.0 34 .............................. CATCGACAACATAGTATTAACAATTTAATAAATA 1090235 30 100.0 34 .............................. TAAGATAGTCCCAACTCTTTGATTTTGGCACTAA 1090171 30 100.0 35 .............................. GCAATAGTACCGATGCTTGCACTAGAATCAGTGCC 1090106 30 100.0 36 .............................. CCTGTAACAATCTCGCAACCTTGAATAGATTGAGTA 1090040 30 100.0 33 .............................. CTTCTGATTTGGCATCACAACTATTTACAGGAA 1089977 30 100.0 35 .............................. ACACGAGGCTACGGGTGATGTAGTTCATTACAAGA 1089912 30 100.0 34 .............................. TTTTGAGCCACTTCTTAACTTCGGTTAGTTTTAC 1089848 30 100.0 35 .............................. TGGGCATTAACTAATGTAACTTTTTTGCCAGTAGA 1089783 30 100.0 34 .............................. TATAAAATAAGTGAGCCACTTCAGGACTCGAACC 1089719 30 100.0 34 .............................. TATCAAAGCAGACAGGTAAATCTATTGGAGAACT 1089655 30 100.0 37 .............................. CTTGATTGGCTGTAAGAGTTCCTGTATAAACGCTATT 1089588 30 100.0 34 .............................. TCAAGTATATTACCATCGCTATCCTTGTAATTAA 1089524 30 100.0 37 .............................. GTAATTATCTTAATAACTTCATTGTAATTAGTTACTA 1089457 30 100.0 34 .............................. AGAATTAAATGATATCAATATACAAAGTACAATT 1089393 30 100.0 38 .............................. AATGGTTTTATCACTTATTCACAAATAAGTTTACTTAA 1089325 30 100.0 35 .............................. TAAAGTCTACACGATAGACGGATTACCGACCATAA 1089260 30 100.0 34 .............................. AAGAAGAACACCGCACGGATATTCTATGCCACAA 1089196 30 100.0 35 .............................. AACGTAGATGCTAAGACTATTCTTTCATTGCGAGT 1089131 30 100.0 34 .............................. GCGTTAGAGGTGACTTTGAGAACATAGAAACATC 1089067 30 100.0 35 .............................. CAAACCGAGGTGCAGCGGATACTGCCCAACAATTT 1089002 30 100.0 34 .............................. ATTTGTATAAATACGAACTTGAGGATATGAGACG 1088938 30 100.0 34 .............................. TGCTCAAATAACTGCTGAAGGAAAATTGATAAAT 1088874 30 100.0 35 .............................. CATTAAACGACATGGATAAGACATTAACAAAACAC 1088809 30 100.0 35 .............................. GCAAGCAACAGTCGTAAGGGCTACTACCGAGAGGG 1088744 30 100.0 37 .............................. TTGGGTCTACTGAACCGAAGAATGTTCCATATTTACC 1088677 30 100.0 34 .............................. TGAGAAGGGGTCTTATCTTCGCTAGGTCTATATT 1088613 30 100.0 35 .............................. ATAATTGAACGATGGGACTACTTGCTAGGAGGGTG 1088548 30 100.0 36 .............................. ATATTAGCTTTGCAAACAAACATGATTAAAAGTTTA 1088482 30 100.0 35 .............................. CCGATTGGTTTAATGTTACCAATCAGAGCGTCTAA 1088417 30 100.0 35 .............................. GGTGTATGCGGTGGGTTGTCGCTAAAGCCCCAATA 1088352 30 100.0 34 .............................. TTATTATGTCTAGGTAATCCCCTAGTGGAATTAA 1088288 30 100.0 35 .............................. AAATAACAATCGCAATATCCATGCGCTGCAAGAGA 1088223 30 100.0 34 .............................. GAAATAGAACTTAAATCAAATAATAAAAATATTT 1088159 30 100.0 36 .............................. GAAAATTTAGTTTCTGTAACTACTGCGGCTTGCTTA 1088093 30 100.0 34 .............................. CATATATTAAGTAACCCTCCGACTTCATCGCCAA 1088029 30 100.0 34 .............................. TGTGCAGCCAAAAGTTTTATTCGTTGCTTTCTTG 1087965 30 100.0 34 .............................. CATTTTTGAGTCGAGAATTGCGACACCTTACTTA 1087901 30 100.0 37 .............................. GTTGAATCGTAAGAATATTGCATGCAATGTTTTTTTA 1087834 30 100.0 36 .............................. TCCCTTCAGAACATCAAGCAGATGCAAGAATATTTA 1087768 30 100.0 34 .............................. GTTGCAAAGTCATTGACCTTTTCATTGTCTTCTA 1087704 30 100.0 36 .............................. ATCACATTTTCTTGTTGAGAAGATAATTTGGATGGT 1087638 30 100.0 34 .............................. CTCCTATCCCAGTTAAAGGATGCCGTATGGGATG 1087574 30 100.0 34 .............................. TCAGAAATTGGCTCTCCACCTATAACATTTAAAC 1087510 30 100.0 37 .............................. ATATTAAAAGGGACTTTAAAAAGTTCTTTTTTTCTTT 1087443 30 100.0 35 .............................. ATAGATGAATGTGAGATACCTGCTGAGTACAAAGA 1087378 30 100.0 37 .............................. TCAAGATCAAAATCTCTACGAACATTGAAATCATCCA 1087311 30 100.0 35 .............................. AATATAGGGAATGTTGTGAGCAGAGTGTCGAGCCG 1087246 30 100.0 34 .............................. GAAGAAAAATAGGAGAACCTAAAAAATTCTAAGA 1087182 30 100.0 35 .............................. TCATTATACTCTTCTTAACATCTTGCTCTTCAGTA 1087117 30 100.0 34 .............................. GTTTTATTAAGTTCTTGCTGTCGCTGCAATGCTT 1087053 30 100.0 34 .............................. ACATGACAGAGTTCACGGCATCTGCTGGATTCGT 1086989 30 100.0 34 .............................. TACGGTGCTAGAGTATTGGCATACGACGGTACCG 1086925 30 100.0 35 .............................. ATTAGAACGATTTGCAGCGAACAAGGGACTTAATC 1086860 30 100.0 34 .............................. CTGCCTGATATATAGCACCATCTTTTTCTATAGA 1086796 30 100.0 34 .............................. GAAGGAAGAGGAGGAGACAAAAACGGTAAAGATT 1086732 30 100.0 35 .............................. TCATGGTGTCGGCTGTCATAAAATTGAAGTCGGGA 1086667 30 100.0 34 .............................. GCACAATGGCAGAGGCAATTATTGCAGAGATTAA 1086603 30 100.0 35 .............................. AGTAGTCCCGGAGTCTCTATAATTTGCGTCTTTAA 1086538 30 100.0 34 .............................. ACAGTAAGCTGACTGTTATATGTAGCGCCATTAT 1086474 30 100.0 34 .............................. GCAGACGGAACGGTTAAAACTATCCGTGACTTCT 1086410 30 100.0 37 .............................. ATATATAGCATGGGTTATATCAACATATATAGACTAT 1086343 30 100.0 35 .............................. AAATAAAATATAAACAATATGACAATAGAAGAAGC 1086278 30 100.0 34 .............................. GCAGATAATTTGTTTATGTACGGAGAAAGTGCAA 1086214 30 100.0 36 .............................. CGATGGAGATGTTTTGGGAATAGTAACAATTATAGC 1086148 30 100.0 34 .............................. ATCGGTGGATTTTGAGGTGGCTGCTGTGGTTGGT 1086084 30 100.0 34 .............................. AGCAATGAAATAATAATATCGTTCGGTATTCTGT 1086020 30 100.0 35 .............................. CTTACAGTAGGTTTTGTTTCATCAACCTTTTCGGG 1085955 30 100.0 35 .............................. CTTACAGTAGGTTTTGTTTCATCAACCTTTTCGGG 1085890 30 100.0 35 .............................. TCGGCGTTGGTAAATAGTTATGTACCCCTTTTTAA 1085825 30 100.0 35 .............................. AGAAAAATATTGATTTAAGTGCTATCAATTCGCTA 1085760 30 100.0 34 .............................. ACATGCATCATTTTAAGCCATTTCTTAACATCTT 1085696 30 100.0 34 .............................. ATTCTTAATCTGCGCATTAAGAAGAGTAGTGACG 1085632 30 100.0 35 .............................. GTGCTACTACTATGACTGCAAGTACCTTTATTGGA 1085567 30 100.0 38 .............................. ATCTCTATGAAACTAGGCTTGCAGATAATTTGCCTAAG 1085499 30 100.0 35 .............................. CCGCTTACAAGGTAATCAGGAAATCCTGTTGAATA 1085434 30 100.0 36 .............................. ATAGGAGTTCCATATATCTGTTCCTGAGCAAAGAAA 1085368 30 100.0 36 .............................. TACACTTAAAGGGCTTGTCGCTCGATGGCGGCTATA 1085302 30 100.0 35 .............................. ACGGCTTATGCGAAGTTTACCGCAGCGGCTAAATT 1085237 30 100.0 35 .............................. AACGGCAACGACCTCGGCAACTTTGGCGCAAAATC 1085172 30 100.0 34 .............................. CTACGATAGAAGAAAACAACGCTCTCGCTACGCT 1085108 30 93.3 37 .........G.....A.............. TTCACATACTGCTCGCCAAGTTCAAATTTGCACTGGC 1085041 30 90.0 0 .........G.....A.........T.... | ========== ====== ====== ====== ============================== ====================================== ================== 90 30 99.8 35 GTTTTAATCATACCTTTATGGAATTGAAAT # Left flank : CCTTTTAAAATGTATTGGTAATGTATGTAATATTAGTGTATGATATTGGTGAAAAGCGTGTTGGTAAGATGCTTAAATTATGTCGTAAGTATCTTAACTGGATTCAGAATTCTGTTTTTGAAGGTGAAATATCTGAGGTTAAATTAAAAGAATTGAGTATATTTGCAAAATCAATAATGGATATTACTGAAGATAGTATGATCATATTCAGCAACCGTACGGGGTATTATATGGATAAGATTATAGTTGGAAAAGAAAGAATGAAACTTGATAATTTCTTGTAAGAAAAATGTCGATGCCTTGTTAAACGGAAATTTTCAAGTTTATGCTTTTTCCTTTTTCGTTCTTTGACATATTGTAACACCCCATAAATAGGGCATATGTCGATCTCCTATATAAAAATATGTTATTAGACATCGACATATTCTCAATGATTATTTGTATCTTTGCAAACTATAAAAAGTCCTTATAATAAGGATTCCCCTATTTTGACTTATAGG # Right flank : ACTTGAAGTCATATATTGTGACTTCAAGTTTGAAGTTTCTATAATCTGTTTCTTTTATGTCCCTAACTGATGTTATAGGCGTCTAATAATTTATTGTTGTTTATGAAAGACTTGTGACTATTTGCAAATGCCGGACTTATTCGTAGTTTTTATCCTAGTTTAAAGGGCAAAATACCTATAATGTTTTATTTTACATGCATATTTGCAATACTATTGTTTGCAAATTCAATAGTAAAATAAACTAAAGTGTGAAATACATGCTATTGAAACTTAGTACATTCCCGTAGATTTTCTTTTCTCTATATGTATTTGTACTATCTGCTAAAGCAAATTAATTCATCTGCTAGTGTTGTGCTCTGTGGGAATCTGCGCTATCTGCGGGGGAACATACTGTTTACGCTGCTGCATTTAATTTGTGAGCTACCATCATGATATAATTGGATATCGCATTTTGCGATATCCAATTACCGAACTCATTTTAGTGAATTGAAACGTAAAGC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:0, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAATCATACCTTTATGGAATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.70,-0.80] Score: 0/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.91 Confidence: HIGH] # Array family : NA // Array 2 2731523-2733025 **** Predicted by CRISPRDetect 2.4 *** >NZ_AP024484.1 Prevotella sp. WR041 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 2731523 47 100.0 29 ............................................... ATCAAAACGCATGACGAACTGTACTGCCA 2731599 47 100.0 30 ............................................... CTATATTAGTCAAACCCTCTGGTGTAGGCA 2731676 47 100.0 30 ............................................... GGTTGGTAGGTAATTACCTTTCTTGTCAGC 2731753 47 100.0 29 ............................................... AGTGACTTTCTTGGTAAGATAGAAAGCAC 2731829 47 100.0 30 ............................................... TAATATCATCGTGTTTTATACCGAACCCTA 2731906 47 100.0 30 ............................................... TGTTGATGGTAGCGAACAAGCTGCCGATTT 2731983 47 100.0 30 ............................................... TAGTGACGGCACGGTTAAAACTATCAGAGA 2732060 47 100.0 30 ............................................... CCTCGTACGATTACACCTATACGGAGAGCG 2732137 47 100.0 29 ............................................... AATTATTCTCTTGAATAATATCATTAACT 2732213 47 100.0 29 ............................................... TTGATAATACCTATTCTTATTGTTCTAAG 2732289 47 100.0 29 ............................................... TTAATACATCTGATATTCGTTTGGCACGT 2732365 47 100.0 29 ............................................... CATAATCAAACAGTCTTTTACATATACCT 2732441 47 100.0 30 ............................................... CCAAGTCCTTCAGTCCTTCTTCTCCGTGCA 2732518 47 100.0 30 ............................................... TACGGTCGTGGCGTTCGTGTTGACGCTAAA 2732595 47 100.0 30 ............................................... CTAGCACAGGGTTACAATTTCAGCAAGGTC 2732672 47 100.0 30 ............................................... TTTGTCAAGGAAGCGTAACGGCACGTAGAA 2732749 47 100.0 30 ............................................... CAGATACCGACAAACTGTAATAGACATTGC 2732826 47 100.0 29 ............................................... AGATGGACTTTCATCAGGATTTTAATTGT 2732902 47 100.0 30 ............................................... ACCTTATCATTTGCTTTGGCGTCCGTTCCG 2732979 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ============================== ================== 20 47 100.0 30 GTTGTCAATGCACTTGCAAAGATATGAAAAATTTAGCTAATCACAAC # Left flank : TAGTTTGGCAAAATGTTTTAGTGGTGAACTACGCAAAATTTCTTATCCTAATGCCTTTATCTCAAAGATTTAATGAATACAGAATTATGTGGGTCTTAGTCTTTTACGATTTACCGACAGAAACAATGAAAGAATGTAAAGCTGCTGCTAAGTTCAGAAAAAATATCATGGCAGATGGATTTACAATGTTTCAGTTTTCCATATATGTACGTCATTGTGCAAGTATGGATAATGCTCAGATTCATATTAAAAGGGTGAAGTCATTGCTCCCCGAAAATGGTAATGTTGGTATTTTGTGTATTACTGATAAACAATTTAGTGATATACAGCTTTTTTATTGTAAGAAAGAGCAAAAACCAAATGCCCCATATCAGCAGTTAGAACTATTTTAGAAAACGGGATTTCTATATTAAATAGAATTCCCGCTTTTAATCTTGATTCTTTTTTTATTTCTAATACACAACGTAAAGCATTGATTTACAATTATATATAAAGATCAA # Right flank : CCCATGTTCATCTTAGAACGTCCGATTCCGTGTTGTCAATGCACTTGCAAAGGTACACAAAAAATAATACACAAGAATGGTATTATATAAATTTTTCAAAGAACAATTCAAATCTATAAAAACGCAAAAGGGATGCGCTTTAGCACATCCCTCTGTTGTTATCCTGCCATCCATACCGTGCAGCTAAGTAGCGCTGTGAGCGCTGCAATTAACCATATTAAGTTGGTTATGATTTTAATTAAGTCGTTGAAATCGTGATAGCTCACTCGGCTATTCCTGTGTTTCGTTCTGTTGCGTTCCAAGCAACCCCAGAAGACTTGAAGCGATAGCGATTACTATCTTGATTATCCATGAAATGTTTACTTTGTTCTTATCCATTGTTTGTGTTTGTTTTTAATTTGTTGTTTGTTTAAAAGCAATGTCCCCCTGTGCGCATCAGGGGGAACGATGTTTAAGGCTTTACGACTCCGCCGTTTGGATCACCTGTTTTTGGTGCACCC # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTCAATGCACTTGCAAAGATATGAAAAATTTAGCTAATCACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.09%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-1.70,-1.70] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [80.0-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.27,0 Confidence: MEDIUM] # Array family : NA //