Array 1 283350-288599 **** Predicted by CRISPRDetect 2.4 *** >NZ_BJDM01000001.1 Paucilactobacillus kaifaensis strain 778-3 contig1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 283350 36 100.0 30 .................................... ACTTTTACGTTCTGATTCTTGAACCCCACG 283416 36 100.0 30 .................................... AAACCTGTGGCAAGTTTTAACATGTCACCA 283482 36 100.0 30 .................................... AAATCGGGGCTGGGGTGGGTTTGCACATAG 283548 36 100.0 30 .................................... AAAATCTAAAATTACTAAGTTTCGTAAATT 283614 36 100.0 30 .................................... ATGAAGTAGTTGACACTATAGATGGCTGTT 283680 36 100.0 30 .................................... CAACTAGTTTATAAGGCTTCGGTTTACCCT 283746 36 100.0 30 .................................... GCAGTAATGCTACCAATCTTGACATAGCTA 283812 36 100.0 30 .................................... TCTTCAAACTCTGCTTTAGTCTGGTTGATT 283878 36 100.0 30 .................................... GTGTGATCTTTTGAATATTCCCAAACATCA 283944 36 100.0 30 .................................... ACCGTTACGCCGTTATCAAACATTTGCATG 284010 36 100.0 30 .................................... AGATCGTTGCTTATAAATCACCACTCGCTA 284076 36 100.0 30 .................................... TTGTTTACCCATCCAAAAGTACATCCAACA 284142 36 100.0 30 .................................... AACTTCATATCATCAACAGTCACTTTACGT 284208 36 100.0 30 .................................... TTAGATGGGATAGTAATATCGCTAGTTACA 284274 36 100.0 30 .................................... CAATTCTTCTGCATATCCCGCAATAGTTCT 284340 36 100.0 30 .................................... GATCTACTTATTGATTTAAGCGTTCTGTTA 284406 36 100.0 30 .................................... TGGAAACGAGTGCCAATTATTAAAGCAGGA 284472 36 100.0 30 .................................... GTTACTACCTCTACCATGGAAGCCTTTGGC 284538 36 100.0 30 .................................... ACGATTCAGTAGCGTTTCAGATGTTGGATA 284604 36 100.0 30 .................................... TTACCATGTGAGCTAGGGATTTGCGAGTAT 284670 36 100.0 30 .................................... CGCCGATTTCGTAATAAACACTGATACATC 284736 36 100.0 30 .................................... AACCACATTAGATGTTTATACCCATGTTTC 284802 36 100.0 30 .................................... CAAAGACCTCAGGTACAATAGCATCTGCTA 284868 36 100.0 30 .................................... CTGCCATCTTGGTCTGAAATCATCAATGAC 284934 36 100.0 30 .................................... AAACGTATGGGATTAATTTAAATTAAACAA 285000 36 100.0 30 .................................... GAACGGGCAGCAAATCACTGTGGGAGCAGG 285066 36 100.0 30 .................................... TATTTATATCTTCGTTTTCCCTTTGGATGA 285132 36 100.0 30 .................................... GTAAAATCAGAGGCGAGGACGTTCGCAGGG 285198 36 100.0 30 .................................... GCCGATAGTATTGTAAGACGGGCTATGATC 285264 36 100.0 30 .................................... TACGGGCTGTGGAAGATGCCACAACCACTG 285330 36 100.0 30 .................................... TATTTCAATTTTTGAACGAACAAAATAAGC 285396 36 100.0 30 .................................... CTTGAATCAATATGGATTGTATTACCATTT 285462 36 100.0 30 .................................... CCCATCAAATGACTTAATGTTTTCGCTATT 285528 36 100.0 30 .................................... GTAATGTTTTCAGATTTAGCATATGAAACA 285594 36 100.0 30 .................................... CCTCCTATTAGTGTCTAAATGAGTCAATGA 285660 36 100.0 30 .................................... CGGGTTAGGTAAAACTATACCGACACTTAA 285726 36 100.0 30 .................................... CAGCCTCAGTGAATTATGCTGTAGTAAGCA 285792 36 100.0 30 .................................... TTGGGAGATATCGGGGAGTCTACAACTGAT 285858 36 100.0 30 .................................... TTGTTCAACAGACCAACCAGCGATAGAACT 285924 36 100.0 30 .................................... TTAAAATTTGGGATTTAGAAGATGATTCAA 285990 36 100.0 30 .................................... GTGTTTATCAAGGAGGCAGACAAATGAGCT 286056 36 100.0 30 .................................... CAGCCAAATTTAAAAAGCATTCAGATGTTA 286122 36 100.0 30 .................................... ATCTGCTTGCACAATAAAACCCGATTCATC 286188 36 100.0 30 .................................... AGTGCAAATGATAATGCGATTGAATAGTTA 286254 36 100.0 30 .................................... TGTGTTATCTACTTCTTCTTTTGGGACATT 286320 36 100.0 30 .................................... ATGCGGTAGTTAAAATATTGATATTGTCTA 286386 36 100.0 30 .................................... ACAACAATCAGTTCACTAGCACTAAACTAG 286452 36 100.0 30 .................................... CATTGTTTTACATCTTCTTCCTCTTGGTAT 286518 36 100.0 30 .................................... TTTGGTGCCGCTGCTTGCTGCGCCTTTTCA 286584 36 100.0 30 .................................... ACGTATTCCGTGGCCGTGTTCTTAACGTTG 286650 36 100.0 30 .................................... CGAAATCTTACAGCCGAATTAGATTCTTAT 286716 36 100.0 30 .................................... ATTGTTTCTGGGTTTGTTAAAGATAATGAT 286782 36 100.0 30 .................................... AGATATTAGCCCTGAACTGAATGAAGCAAT 286848 36 100.0 30 .................................... CCAAGCGGTCGCGTCTATTCAATTCCGCTT 286914 36 100.0 30 .................................... TTCCAGGAGATATTGTTGAGGCAGCAGTCA 286980 36 100.0 30 .................................... CCAACTAGATTCATGAATGATGATTCAGTA 287046 36 100.0 30 .................................... AAGGTGGACGCACAAACGTTATTAATCGTC 287112 36 100.0 30 .................................... CTTGTTTTAAATTCATAATTACCTGTTGCT 287178 36 100.0 30 .................................... GAGCGATTTTCAACCGTTGCGCAATCAACG 287244 36 100.0 30 .................................... CAGTTTTTCTTGTTCGACTTCGTAGCCGTT 287310 36 100.0 30 .................................... TCTAGCAACTGGCGAGGCACGTAACGGCAA 287376 36 100.0 30 .................................... CCAAACATCTCGCAACATTTGGACCGCATT 287442 36 100.0 30 .................................... TGCCCCATTGTTTACCCCCCAAAACTTCAA 287508 36 100.0 30 .................................... TGTCTTGTATAATTGATGTTCTTCGTAACT 287574 36 100.0 30 .................................... CGGATCTAATACGAGAATATACAGAGATAT 287640 36 100.0 30 .................................... AACAAATTGAATTAGTAAAACAATTTTAGG 287706 36 100.0 30 .................................... TATTTAGCATGATATTTCAGCGTGTCTCGC 287772 36 100.0 30 .................................... CGGGTGATAGGGCGATGGCCGAAGTGGTTA 287838 36 100.0 30 .................................... TGCTGTTCCATCGTCATTCTTGAATTGCTC 287904 36 100.0 30 .................................... CCGTATCTACTACTAGGGCTCGGTCGAGTA 287970 36 100.0 30 .................................... ATAAACAAAAAAGCCATATCCCCTCCCGCC 288036 36 100.0 30 .................................... TAATTGTCGGATTTACGTATTCATGCATTT 288102 36 100.0 30 .................................... CCGAAAATGCCCCAATAATTTTGACCACTT 288168 36 100.0 30 .................................... AAGCGGTAAATATTAATAATGCAATCGTTG 288234 36 100.0 30 .................................... TGAAATGGCAGATAAGATCGATAAAGATGC 288300 36 97.2 30 .......................C............ TCATTCTATTAATTCAAATGATTATATTAA 288366 36 100.0 30 .................................... ACTCTGTGGAATACAAATTCACATCAGTAG 288432 36 100.0 30 .................................... GATAACGACATAGGCACGGCTTATAGTGAG 288498 36 100.0 30 .................................... AATATATCAAAGCAAAACAGAAAGGTAAGT 288564 36 97.2 0 ...................................T | ========== ====== ====== ====== ==================================== ============================== ================== 80 36 99.9 30 GTTTTAGAAGAGTAGCAAATCAATGAGTTCAGAACC # Left flank : AAGCCGATTTAAATAAATTATTTCAACATTCATTGAATAAAAAGATTGTTTCATTAGTTAACGATGATCAGATGCAACAAATTTTTGAACTTAGTCAACAATTGAAGCAGGTCATTTTAGAATCGTCATATTTAATGGATTTACCGTTAACCATTGAAGAACAAACTGATATTGCAAAGGTTATAAAATTTAGTGAAATTAGTTTTGCTAAAGAAATTAATGTTAATCCATATGGTATAATTGAAACAATTCTAAAGACAGCAAAAGAGTTAAATTTAAGTAGTATTGTTGGTTTTATGAATGTTACAGACTATTTAACCGAAAATGAATTTTCCGATTTAATTGAATCTGTAAAATCATTAGATGTGCAAATTCTTATCATTAAATTCTCAGAAAGTCGGAGGGCGGAGAGATATAATGGATGCCGTTATTATTACATTGATCATGATTATGTTGATTTACGTGAAAGTGAATAATGAAAATATGGTTAATGTTTAACG # Right flank : TCAATCGTTGGAGCGTTGAGTACTTTTGACGGTTCTAGATACTTACCTAAATTTATGCGTAAAGAAGCATCTTATATTATTCGGCTAATAGGTGTTAATCTATGAGGCTTAACTACAACATAATGGTATGAACGTTTAATAAGCTTAAAAATAGTAATTAATAGTACCCGTAGCCTAAGAGTGTACGTGTTTAGAAATGAATATAATTTATTGCGCTGAAGGTAAATTACTTATAAAGTTTTTTATCAGATAAAAAATAGTAATAAAAATTAACATTATTAACAGCAATAAATAAAGAATTTTTTTAAATATTTAATTTACTAGAATTTTAATTTATTTAGTTTTAAACTAGGATAGTCGGTGTTTGTCGATAGTTAGTTTTATAAGAGTAGCTAATTCCTAAGTTTAGGTAAAAATGGTAATCTTCAAATTGTCGATAATTTCAAAAACATATTTTTGTTTTTGTTTTTTAAAAAAATTTATTTTAAATTATCGATAGT # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAAGAGTAGCAAATCAATGAGTTCAGAACC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.89%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [73.3-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.68,0 Confidence: HIGH] # Array family : NA //