Array 1 23159-21641 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAOMM010000195.1 Acidithiobacillus caldus strain MELC5 Contig195, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 23158 28 100.0 33 ............................ CCATAGTCAGCCGTCAGCATGGCAAAAATGCTC 23097 28 100.0 33 ............................ TTACAGTATGGCGCGGAACGCAGCCGGTGGCGT 23036 27 92.9 33 ..........T..............-.. TGGGGTCCAGCCCGCGGCCTTGCAGCTTGAGCC 22976 28 96.4 33 .......................G.... GCCCCCGCGCGTCTTGAGCATGACGAGAGACCG A [22973] 22914 28 89.3 33 ...................TA..G.... GGGCCTCCAGCAGACCGTCTACGACCTCGTATA 22853 27 92.9 33 ..T......................-.. TGTGGGCGCACCTACGAGGGCACCGTCAAAGGG 22793 28 100.0 33 ............................ CCAAGCATGGATGCGAGGATACCCCGCAGCGCC 22732 28 100.0 33 ............................ CGGGCAGCATCACCGGGACAAAACCGGGCGGCG 22671 28 89.3 32 ...........A..T..........C.. GCTCCGGACTCCGCTCGTACCCGTCATTCACC 22611 27 92.9 33 .G.......................-.. TGGGGTCCAGACCGCGGCCTTGCAGCTTGAGCC 22551 28 89.3 33 .............AT........G.... CTGCTGCAAGGCCCTCAAAGGGTGCTCTGGCAA A [22548] 22489 28 92.9 33 ........A........T.......... CTCAGATGTTCCGACGTAAGCCGGTCAATCATC 22428 28 100.0 33 ............................ CGCCTTGAGCTCCCTGTTCCGCCATGTGGAGGA 22367 28 100.0 33 ............................ GTACGCGGCTCATGCACACCATTCCAGCGATGG 22306 28 100.0 33 ............................ TCCAAGGCATCACGAGAGAACAAATCGAGCATT 22245 28 89.3 32 ..T..........A...........C.. TTTGTAGGAGTGATGGCCGGTGCCGTCTAGGT 22185 28 96.4 32 .........................C.. TGGGGGTGTATAGCGACCAGACTATGGGTATA 22125 28 82.1 1 ......................CCT.TT C Deletion [22097] 22096 27 92.9 34 ...A.....................-.. TTCTTTGCATTTCGCATTTCGCATTTGCTGCGCT 22035 28 85.7 33 T.........TA..T............. GGGCCAGGTTGGGCCGTTCTCACTACGAGATAC A [22023] 21973 27 85.7 33 ...A.......A..T......-...... AAGCACGGTTGCGCGTAATGGCAAAGTTGTGCT 21913 28 92.9 33 ..........T..A.............. CCGAGCCAGCACCTGACTCTTGATAGCGAATCT 21852 28 85.7 33 ..A..........AT........G.... AGTCGATATCAGCGGAAACGCTTCGGACATTGC 21791 28 82.1 33 .C...........AT....A...G.... ACAAGCGGCCAGGTCTCCCGTCATGCTCAAGAA 21730 28 96.4 34 .............A.............. GTACACCATGGCGCAAATAATCGACTTTCTGGCC 21668 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================== ================== 26 28 93.3 32 GTCGTCCCCGCGTGCGCGGGGGAAAACC # Left flank : CTTGACCAAGGAGGATGCGGAGGACTATCTCCAGCGTCTCGACGACTGGTCGGAGGCCGACAAGGAGACCACAGGCCTCAAGCACATCAGCGAGCGCCCCTGGGAGGAGATCGTGGCTGGTGTGGAGTGCGAATGGGGCTACCAGATCCACAGGTTTACGCCCTTCCAGTCCGGCGCGGTACTGGCTGGTCTGCGCTACTTCGCCAGCGATCCGGTCATCGGTGCGCACAAGGCGGTCGGGCGCGGTGAGCTGGCGATGGAACTGAACGCCAGCGTCATCCGCCAGGATATCCTGAACGGCCCCCAAAGCGCGGAAGCCGGAACGCTCACCCTGCGGCGCGGAGAATTCCGTGTGGATGGTCTGCTGGCCGAGCATCTATCCGAATTCGACCGGCTGGCGAAGGCGGGTTTTCCGGGGATGGATTTCCATTGCCTGCCCGCGCTGGTGGAGGGGGAGTGAGTGCGAAAAATCGCACGAAAAACGGGTGTTGAGAGCTAGA # Right flank : GGAACCCGCGACGGGCCTTTCAGGCCGTTTTCCGCCGCAGGGTTCCCTCGTCCTTTCCTCGACAGACCGCCCGGCCCGGTTTAGCCAATCGCCCACGAATCCAGGTTGGGAGGTCCATGTCCCGCGTGAGCATTATGCCTTTGGGGCTGTGGCCCAGGTGAACGACCGGCGATTCCGAAAGGGAAAAGTGGTCGCACTCCACCCAACGGGCGAAGGCCTGTTGGAAAAACCGGGAGAGGAACCGGATTTTGTCCCGTTGGCCGATCCGGCGGAAAAAGGCTGCATGCACCTGCAGGTGTTCCTGGTCGTGCTCGACCAGAAGTATCCCGTACACCTGCAGGGGCTGTCCTTCGGCGTGGGAAATGCCGGCCCAGGCGGAGCGTGTTGCGGACGTTTGCCCGAGCACGCGCACACCGTTTTCTTCGAGTATCTGTACTCCCCGACGATACGGCAGATGTACCCATTCGTGATGCGACCGCTTTTCCATGGTGGCCTCCTTT # Questionable array : NO Score: 5.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.66, 5:0, 6:0.25, 7:-0.10, 8:1, 9:0.42, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGTCCCCGCGTGCGCGGGGGAAAACC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-12.30,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [28-14] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [33.3-45.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.42 Confidence: HIGH] # Array family : NA //