Array 1 99299-99508 **** Predicted by CRISPRDetect 2.4 *** >NZ_BJVV01000001.1 Acetobacter orientalis strain NBRC 16606 sequence01, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ =================================== ================== 99299 28 100.0 35 ............................ AAAGGACGCCATCATGATGGCGCAATACGCGCCGA 99362 28 100.0 32 ............................ CCCCGGAAATCCGCCAGTTCCGGGTTCGCCTG 99422 28 100.0 32 ............................ AATGACAAGCGATTGTTTACAAAAATTAATGA 99482 27 92.9 0 ........-...........T....... | ========== ====== ====== ====== ============================ =================================== ================== 4 28 98.2 33 CTTCACTGCCGCACAGGCAGCTCAGAAA # Left flank : TTGTGGCTGGCACCCCCCTACCCAGCCCTGTTACGGCCTGATAGAAAAACCACCCAGCACAAAGCTGCTGTGTGATAAGGAGCACACCCCATGCAAATGACACTCCGCCTTGCCTGCCTTATTGGCATTGCCCTTGCAGGTGTGCTGCGCTTTGTAGACCCACATTACCACCTTACGGCAGAAATTGTGGGGGCCGGGTTTTTAATAACCGCTCTGGTAGCCACCGTCATATTAGACGAAACAGCCCCGGCCGGTATTTCAGCCTCTAAAAAATAACTACTTACCCTGCCCCAAAAGCAGGGGCTAACACGCCTTAAAACTGGCTATTCTGCACAAGCCTAGCTACAGTACCTAAACAAACCCTTTTTTGACCCTTTTTAAAACACCCCAAAAAGTTCTTTGAAAATCAAAGCCTTAAAAACCACCCTCAAAAAAAGGGGTAAACGCACTAAAACCCCTTAAGCCTTTGTTTTCTTAAGCGTATCTCTTTTTCCCTTCTA # Right flank : AGCAATGGCTCAAATCAACTAATAGTCGAATGTACCTGACTTAAAGCTTAACAAAGACTTGAGAAGCATAGAAAACTGAACAACACATACTTTAGCGATGTACACAATTTTTAAAAAGACTACATTTTCAAGAGGGCACAAGCCCTTTGAATTTTCGTATTCGTAAATACTGCTCTTAAAAGCAATTCTAGTCACTCCATAAAATTAATAAATATTTATTTGGATAGCCTTATGATATCTCGCATTCTTGAAAATCAAGCTTCATTGCGAGGAACGATTACACTATGAAAACACGAAGTTACTTTATTCTTCTCAATATAAAAATAAGATAACACAAAATGCACAAAATATACATAAGTACGATAATAAAATTAGCAAAATATAAAACCCTTATCACCTTTTATGCAATTTTTTCAATAATTAATGGACTACTTTGTATTACTCTCACCCCCCCCTTTCAGGTGGCAGATGAACCCAACCATTTCATGCGTGTATTACAA # Questionable array : NO Score: 5.77 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTCACTGCCGCACAGGCAGCTCAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGCACAGGCAGCTCAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 418076-417567 **** Predicted by CRISPRDetect 2.4 *** >NZ_BJVV01000001.1 Acetobacter orientalis strain NBRC 16606 sequence01, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 418075 28 96.4 32 .................T.......... TGTCCGTAATCAACACGGCGCAAGGCACCCTG 418015 28 100.0 32 ............................ GGACACGATTGCACCCGCAGGATATCCGCCGA 417955 28 100.0 32 ............................ TAGACCGCGCGTAAAGTTGGTCAGCGGGTTGT 417895 28 100.0 32 ............................ ATAAGGCCAAGCGCACCTTCGCCCATGCCGAT 417835 28 96.4 32 .........................C.. GGCGCAACGGGCGCAACATGGCAGAGCCTGTT 417775 28 100.0 32 ............................ ACCCAGCGCACCAAGGGCCGCACTGTCGATGT 417715 28 100.0 33 ............................ AGAGGCAGCGCTGGCACCGATCAGCGTGCCAAA 417654 28 100.0 32 ............................ CAAAACTCCCGCGCCACAGGGACTTTGCGGGC 417594 28 78.6 0 T...................T.T.T.TG | ========== ====== ====== ====== ============================ ================================= ================== 9 28 96.8 32 CTTCACTGCCGCACAGGCAGCTCAGAAA # Left flank : GGCTTATGGAGCGCTTTCTGTAGGCGAATTGCTTATTAGCGCGCTTGGCCTTGCCGTGGTGGCCCGCTATGTGCCGCTTAATATTGGGGCCTTTATGATGGGCAGCTACTGCGTGTCTAACGGTGTGGCTATGTACCTTGGCAGCATGGTGGCCAATATGGCTGCTGTAAGCGGTGCTGTTGGGGGCGAAACAGTTGCCGCAATGCTGCCTGTGTATGCCAGTTTGTTCCGCTCTCTCTTCTTTTTAGCTGTAGGGTGCACGGTGGTTTTTGTGGTGTGCCTGCCCTTTACACGGCGGTGGGACGCCCAGCACCATGCAGCACTTGGCATTAAAGCTGGCGCAAAGGGGTAAAGTTTACCCCTAAAATACCCCTTTTTTTAGAGCCAAAAATAATCTCTTTAAAATCAGATACTTACAAAACGGCTTGCAAAAAGGGGTAAAAGCGCCAAAATAGGCTGCAAGACGCACAAAACTGCTCTTTTATAACCATATCAGTCTA # Right flank : TGTTGTTAGGGGCTTTTATTGTCTGTTTAGAAAGGTGTAAGCGGGCGAGTGGTGGAGCTGAGGGGAATCGAACCCCTGACCTCCTCATTGCGAACGAGGCGCTCTCCCAACTGAGCTACAGCCCCGCCTGCTTTATTTTGCGTGTACAGAGCGGGGTAAAGCCCTGTCAAGTTTAGGTGGCATGCGGTAAACCGGTTAAACACACGGCATACTCTTATTGCAAAGGAGCAAATATTTGCTGTTTAGCCTTTATATGGTGCTAACGCGCCTGCTGGATATTTATTGCTGGATTTTACTGCTATCGTGCATTTTTATTAATTTGTGCATGTTTGGTATTTTAGACAGCCGTAACCAGCTTGTTTGGAAAGTTGGTGTGTTTTTTAGCCGTGTGACCGAGCCTGTTTTGGGGCCTATACGGCGTATGCTCCCTAATTTGGGAGGGGTAGACTTTAGCCCCATGATTGTGCTGCTGGGCATACAGTACATTGTGCAGCCTTTGC # Questionable array : NO Score: 6.10 # Score Detail : 1:0, 2:3, 3:0, 4:0.84, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTCACTGCCGCACAGGCAGCTCAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGCACAGGCAGCTCAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [51.7-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //