Array 1 494-1363 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JACEMF010000039.1 Pseudomonas aeruginosa strain PHELES3 PHELES3.39, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence             	Spacer_Sequence                  	Insertion/Deletion
==========	======	======	======	============================	=================================	==================
       494	    28	 100.0	    33	............................	TCGTTCACGCAAGAGGGCACGGACGGCCTCGAT	
       555	    28	 100.0	    32	............................	TAACGTAACGTCTGCACATTATGCGAAGCCAG 	
       615	    28	 100.0	    32	............................	AAAATCTGATGCCGACCATCGTGATTTCGAAC 	
       675	    28	 100.0	    32	............................	GCCCGCTGGGGAAGCCGCAGTTATCCGGAGTA 	
       735	    28	 100.0	    32	............................	ATGCTCATTTCGCCACCTCGATTCCGGCTTGT 	
       795	    28	 100.0	    32	............................	AGGTTGACCAGCATGGCCGGCATCGACAGCGT 	
       855	    28	 100.0	    33	............................	ATGCAGCCAGGGCTTACTCCGCTGCTGCTGGAC	
       916	    28	 100.0	    32	............................	TTGAGCTTGTCGTTGTACTCGTCGAGGCTCAT 	
       976	    28	  96.4	    32	.............T..............	ATACTGACTCAGCCAGGGAAAAGTCACTTGGA 	
      1036	    28	  96.4	    32	.............T..............	AGCGTGCCATGGCGGCGGTAAGTCAAACCGTT 	
      1096	    28	  96.4	    32	.............T..............	TGGTCGAACAGATGGCGGTCCTCGGCCAACTG 	
      1156	    28	  96.4	    32	.............T..............	ACGTCGGAACGCAACTACCTGACCGCGTTGGT 	
      1216	    28	  96.4	    32	.............T..............	ATCGACCACGACAGTGCTTCCCTGGTCTATTC 	
      1276	    28	  96.4	    32	.............T..............	ATTGGCCGTGCAAGGTCCACCAGTCGATGCTT 	
      1336	    28	  96.4	     0	.............T..............	|                                	
==========	======	======	======	============================	=================================	==================
        15	    28	  98.3	    32	GTTCACTGCCGTACAGGCAGCTAAGAAA	                                 	       

# Left flank :   ACCTCCCAGGCCGACATGTGTCCGCGTAGCGCCACCCTGTACGTGGACACCCATGCACTCCCCACGCACTTGTTCGACAACGCGAAAGTGCGCTTGAGGTCGGCAATCAACATCCTGGCCATGACCCGTTTGCTCGATGAGAAAGAAGAGCCCGGCGGCACCCTGGCCTACATCAACGGTGCGTTGCTGTCACTGCTCAGCGATGCCTTGTCCGAAATCGAGGCGGGCCACCCGAGCCTGTAGCGCCGCTCCCCGGCGCGACGCCCCCGGCCTGGCCGGGGGCTTTGTTGCATCGCCCATCACAAGACCTTTCGCGCTCGTCCCGGTCCTCGCGAAACGGCCGCCAATTGCCCGAAGCTTCCGACCCTTTTTTCGGACGATTTCTTACGCCCTTATAAATCAGCAAGTTACGAGACCTCGAAAAAAGAGGGTTTCTGGCAGGAAAAACTCGGTATTTCCTTTTCCTTCAAATGGTTATAGGTTTTCGGGGCTAG
# Right flank :  ACTCAAGAAAGAGCAGAACGGCCAGCCTGCGCCGTTCATTGCCGTGTAGTCCCGTAGGGCGAATGCCGCCATAGGCGGTATCCGCCCTACGGATCGGGTTCCTGGCATCCACGAAGTGAGGCTTGCCCTCCAAGTGGTGGGGCGGCAAACCCGCCCCGTCAGGAGGCCGAGCGGAATCGTTGCGGAGGGGGACGAGTGGCAGGATGCCGCGAGAGCCGCCTCGGTCCACGAAGGACCGTGGCGGCGTGCCGCCGGGAGCAACGATGCAGCGAGGGCACCCCAGCCGAGAGGCGGCTGGGGCCGGATGCCGGGGCGAGTCTTTTGGTTCCTTTTGGACGCTTGCAAAAGGAACTCGCCTGGGAAGGCGAAACAAGAGGCCAAGGCAGGCACAGAAAACAGCTTGAGCAGCAAACATGAAGCCCGCTCGAACGTCCCGTAGGGCGAATACCGCCACAGGCGGTATCCGCCGATGCCCTGGAGAGCCGGCGGATAACCGCAAG

# Questionable array : NO	 Score: 6.09
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.92,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTCACTGCCGTACAGGCAGCTAAGAAA
# Alternate repeat :   GTTCACTGCCGTATAGGCAGCTAAGAAA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     F [9,5] Score: 0.37/0.37
# 	Reference repeat match prediction:         F [matched GTTCACTGCCGTACAGGCAGCTAAGAAA with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-8.00,-7.70] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      NA [0-0] Score: 0/0.41
# 	AT richness analysis in flanks prediction: F [58.3-38.3]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [5.51,0   Confidence: HIGH] 

# Array family : I-F [Matched known repeat from this family],   
//