Array 1 264483-267442 **** Predicted by CRISPRDetect 2.4 *** >NZ_LIWR01000044.1 Campylobacter sp. RM16189 contig00048, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ====================================== ================== 264483 29 100.0 36 ............................. CCGCGCGATAGATAGCTCAAAGCGTCTATTTTCTAA 264548 29 100.0 37 ............................. TCAAAAAGGTAATCAATTTATAAATTTAATCAACGAT 264614 29 100.0 36 ............................. TATAATCGTTCCGATGTTAAATCTTCAGATTTTGGA 264679 29 100.0 36 ............................. CCTATTTTTTCAACTGTAGCCCTTTGTAAATTTAGG 264744 29 100.0 36 ............................. ATTCGCTTGAAGTCCATTTGCCGGCACCTACTCCGT 264809 29 100.0 34 ............................. TCTATAACGGTTTGCGTGTTTTTTTCGATTTCCG 264872 29 100.0 37 ............................. TGCTTTCAAGATTTAACATTATGCAGCCTCCTTGACG 264938 29 100.0 36 ............................. TATGAGGGGGCTAACTCTATTGCTGATGGACTCAAA 265003 29 100.0 37 ............................. TGCTCATTTGAGCTATTGGTCTTTCAAACTCATACAA 265069 29 100.0 37 ............................. AAAAATTTCAACAAACACCAATCCTTGATTTTTTTCA 265135 29 100.0 38 ............................. TGTGTTCGTTTATGATGAACTTCACGCAGCTAAAGACG 265202 29 100.0 36 ............................. TGCTATAAAAACTATCAATGAAGCACAAAAACCTAA 265267 29 100.0 37 ............................. ATGAAACAATCCAAAAACTAAGAGAATACCCAGATAA 265333 29 100.0 36 ............................. TCCACTCAGCGCCTTTCCATGCAAAAAAGCCACAAG 265398 29 100.0 37 ............................. AAAACAAGACCAGCTCTTTCGTATTTTTTTCTATTTT 265464 29 100.0 38 ............................. TTGTATTGCGTTTTTCGTGTTTAACCGCTGTTTTATAG 265531 29 100.0 36 ............................. TAAGATAAGCGGGCTAAAGCCATTCGCCGATGGCGG 265596 29 100.0 35 ............................. TCAACGATCTAAAAATTATGGCCTTAAAAGCTAAA 265660 29 100.0 37 ............................. TAAATGAGGAAGGACTATCAAGCTCGGCTAAATTTTA 265726 29 100.0 36 ............................. TGGTATTTGATAAGCCTCTGCTTGATGATTTAAAAA 265791 29 100.0 36 ............................. AAAGAACATGTTGATTTCGATTTACATCTCATACTA 265856 29 100.0 37 ............................. TCTTTAGAAACGTCAGCACCTACAAAAAAATCTTTTT 265922 29 100.0 33 ............................. GAAGAACACGCGATAACCGATCACTTTGACGGG 265984 29 100.0 35 ............................. TTTGATAGGAAAAACATCGCTTTTTTTGTTTTATG 266048 29 100.0 36 ............................. AATGTGAATATGTAACACTAAAATTTGACAAATAAG 266113 29 100.0 36 ............................. GTAAAAATAAGCGTTGAGATGTTTTGATTTTGTATC 266178 29 100.0 37 ............................. TTCAAAAAAAATAGAAGATGCTTGGGGCAATATCTAC 266244 29 100.0 37 ............................. ATACTTAAGCAGGGTCTCTTGACCCTGCTATATACAT 266310 29 100.0 37 ............................. TTGCCGTTACTACTACACTCAACGTCACTTATAACAG 266376 29 100.0 37 ............................. AGCAAAATTTCACAAGAACATTTAAAAAGAGCAGAAG 266442 29 100.0 35 ............................. TGGTAAATGTCAAGATGGTTTCAGTTTTCCATATA 266506 29 100.0 35 ............................. TATATAGGAGAAAGGGGAAATAGAAATAAAGTAAA 266570 29 100.0 36 ............................. AATGGTGATTGCGGTTCGTATTTTGATGGCCAGCAC 266635 29 100.0 37 ............................. CCGCCCGACTACGTAGATAAATTAAGGGCGCAATATC 266701 29 100.0 37 ............................. ATGGATGAAAAGAAAACCGCTGAAGCTACGGAAACCT 266767 29 100.0 34 ............................. TCAATAGTGAAAGAACAAAAACAAGCCTACATCG 266830 29 100.0 36 ............................. TGTTAATGAGCGCAGTCAATGCGGAAAATGAAGCAT 266895 29 100.0 35 ............................. CCGTAGCACAATCATTCCGATTACTAAGAGCTGGG 266959 29 100.0 36 ............................. CGTCTTGTTTAGTTTATATTTTAGCTCCATACTTGA 267024 29 100.0 37 ............................. TCATCTGTTTTATGTGATTTTCTTTTTGGGCTTTTTA 267090 29 100.0 34 ............................. TTGAACTCTTGAGCTGAAATTTCTACTGCTGAGC 267153 29 100.0 37 ............................. TATCAGCTAGTGCAACAGATGAAATGGCTCAAGCTGG 267219 29 100.0 37 ............................. AAACGTAGGCATATTTCGTTGTAGCGTCTGCGTTTTC 267285 29 100.0 36 ............................. AGAGAAACAATAAAGGGATTATTATGAGTGAAATTT 267350 29 100.0 35 ............................. TGCCACGATTGCATTTTAACCCCTGATAACATTGA 267414 29 86.2 0 ........................T.CTG | ========== ====== ====== ====== ============================= ====================================== ================== 46 29 99.7 36 GTTAGAATTTGCCTTTTAGGCTTTGAAAC # Left flank : GAAATTTATAAGACCGAGCTTGATCCTAGGATTGGTTTTCTGCACGAGCCAAACTATCGCTCTTTAAGCTTGCATCTGGATTTGGCTGAGATTTTTAAACCTATTTTAGGTGATACTCTAATATTTTCGATGTTGAATAAAAAAGAGATTACTGCAAAAGATTTTGAGACTAATGCCGGAAGAATAAAATTTACAAATGATGCAGTGCAAAAAATAGAGATGAAAATGATATCTAAATTAACGGATCAGATAGAAGCAGGAGGACAAAAGCTTACATGGAGACAGATTATTCGCAGAGAAGCAAACCGGCTTAAAAAATGTATATGCGAAAATGCACCATACGAAGGTTTTGTATATCAATAAAGCTTTGCTTAAGATTTTAAAATACTCGTAATTTTGGGCCTTGCGTATTTTAGCAATATCAATTTTAATTTATTTATAAGGTAAATGCATATAAACTTTTATCTACAAACTACCTTGTAGTTTTATATTTGAGTGCT # Right flank : GAATAGATAAAAATAAAAAACAATTTGGAGGTAATTAAAGCATGACTTTAAAAGAAGTGAGTGAAATAACACAAATACCTTATTCAACTTTGGCATATTGGAATAGATGTAGCGACTATAAAAAGAGCCTCATAAATTTTCTAAAAGCTAGTGATAGATCAGTACTTTTAATGTATTTTCAAGAAAAATCGCACTCTAAAAAAGGTGCTAAAATTTCTATTTATAATTTTATTTTTTGAATTATCATTGTTTTTAAATAGAAAATTTATGTATCGGATAAAACTTGACATATTTGAGATTTTATATATATTTTAAATTTTATTCATATAATATTATTTTAATTTGCTATCCAAAGGTATTAGATGAAAAAAATTTTAATCATCGCGGGCTCTTGTAGCAATGGTGGAGCTGGAATTCAAGCTGATATCAAGGCTTGCTCACATTTTGGTTGCTATTCAGCTACCGCAATCACAGCACTAACTGCTGAAAATTCCAATAAG # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTAGAATTTGCCTTTTAGGCTTTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:65.52%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-4.10,-4.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-76.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.37 Confidence: LOW] # Array family : NA //