Array 1 114636-113047 **** Predicted by CRISPRDetect 2.4 *** >NZ_VLSR01000004.1 Acinetobacter sp. RF15B NODE_4_length_251358_cov_54.9353, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 114635 28 100.0 32 ............................ TTTCGATGGTTGTGTGGCGTTTGGTAGCGATG 114575 28 100.0 32 ............................ AACATTTAAAAAACAAGGCTTAAAAGATAGCT 114515 28 100.0 32 ............................ TCGTTTTAATTCCGTTGCGATTTTATTTACTT 114455 28 100.0 32 ............................ TGATAATCAATTATCTATGCTTAAATTTACAA 114395 28 100.0 32 ............................ CTTTAAACGTGATATTAAGCAAATGCCTTATA 114335 28 100.0 32 ............................ AAAACAGCAAATTCAATTTTATGACTACGTGA 114275 28 100.0 32 ............................ ATAATCATTTTGAGCTGTTTTTAATTGTGTAA 114215 28 100.0 32 ............................ GACATCGCCTAGATAAGTAGTGTCTGTTACTT 114155 28 100.0 32 ............................ TGTTGGAAAAACACCATTTACAATAGGGTTAG 114095 28 100.0 32 ............................ CATATCAAGCTCTTCACCATTCTGTAATGCAC 114035 28 100.0 32 ............................ AGACGTTCTTTTCGAAGGTTACCGTGCCATAT 113975 28 100.0 32 ............................ CAATACTTTTATCCATTCCGCAAGAGCGAAGA 113915 28 100.0 32 ............................ TGTATTTAACATCGGATCTGGTGTGGCAAACT 113855 28 100.0 32 ............................ GGCCCCGGCCCCGGCTCCCATTCCGATCCATT 113795 28 100.0 32 ............................ TAGTTTGTTTAGGTGGTAATCAATCGGATAGT 113735 28 100.0 32 ............................ TCAGAAGGGTAGTTCTGTATCTAGGTCATCTT 113675 28 100.0 32 ............................ AGTTAATGAAGACAAGACTTGTGCAGCAAATA 113615 28 100.0 32 ............................ TTATTTTCATTGTTATCGCTATCGCATGCTGG 113555 28 100.0 32 ............................ AAGCAATGAAACTGTTTTCCGAGTTTGGAGAG 113495 28 100.0 32 ............................ AGTTGCAGGTAATCGATGATGATGCAGCCCAA 113435 28 100.0 32 ............................ TCAGAAGGGTAGTTCTGTATCTAGGTCATCTT 113375 28 100.0 32 ............................ AGATACAGGCGGTTTGGGTACTGTGGATACAT 113315 28 100.0 32 ............................ TAACCAAGCTTCTAAAGCGTTGATTGTCTCAA 113255 28 100.0 32 ............................ AATATGCTCGTGCAAAAATCCTATCACAATTA 113195 28 100.0 32 ............................ TCGACCATTACACCAGGCACACCTAATAAAGA 113135 28 100.0 32 ............................ GCTAAGGACAGGTTCGTTTAAATAGAATTTTT 113075 28 100.0 0 ............................ | C [113050] ========== ====== ====== ====== ============================ ================================ ================== 27 28 100.0 32 GTGTACTGCCATATAGGCAGCTTAGAAA # Left flank : TGATCATTGGTGCCTTTGTGGAGGCTCGTTCTTGTGAGCGTTTCTATGCACTTGCACCTTTGGTCGATGAAGAGCTAGGCCGTTATTATCGTTATCTGCTGAAATCCGAATCCCGCCATTATGAGGATTATCTGGCACTGGCGATGGATGTGGCAAAAACCGCAAAATGGAAAAATCCCGAAGAGAATATCCAGAGCCGTATTGAGCATATCCGGGAAGTAGAAAAGAATCTGATTTTAAGTCCAGATGAGCTTTTTCGTTTTCATAGTGGTGTGCCCGTACAGGCAGCATAAGTTTGACATGATGCAAGCGGGACAAAGTTCCCGCTTTTTCTTTGGGCTGAAGTTGATTAAATAGAGGCTTTATTTAACCCAAAATATTTTTATGCTCTAATTAAATATAAAAATCAGAAACTTATAGATAGATAGGAATAAGAGGGCTATTGGGGTATATTTAAGATAATACTATGTTTTTTATCTGGTTTTAGGTATTTTGGTTGT # Right flank : GCGAGTTGATGATTTTAAGGTCGCTAAAAGAAGGAAGGGCATAAAATAGAAAATAAAAAAGCCCGCTTTAATGCTGCGGGCTTTCTTGAATTTGGCTCTCCCACCTGGGCTCGAACCAGGGACCTGCGGATTAACAGTCCGTCGCTCTACCGACTGAGCTATGGGAGAATCTGCATGCGATTATAGAGACATTTTGACAAGGGTCAAGAAAAAACTTTCATATTTATGACAAATCATATTTATCTGATTTTAATTTAAACAATTGCATAAAAATATTGAAAAATACTTGTCAGGAGAATATCCAGTTGCTAGATTGAATCCATAAAGTCGTTTGATCAAATGGTCAAACAGTGTGGATTTAAACCGACTTGCCAGCACAAAAATGGCTAAACTGGAGAAAGCGAATGAATACGCTCACAATCCCCCAAATTTTCGCGCAGTTGTCTTTCTATCAAGAGCATTATCTCGATATTATTCAAGATTCGAGCCAATATTTTACT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTACTGCCATATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: R [matched GTTCACTGCCATATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.40,-7.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.91 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 90180-95670 **** Predicted by CRISPRDetect 2.4 *** >NZ_VLSR01000002.1 Acinetobacter sp. RF15B NODE_2_length_256595_cov_54.4001, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 90180 28 100.0 32 ............................ TGAACTATGGCCGGGGGATACACCAAAATTAG 90240 28 100.0 32 ............................ AAGGCTTCAACCACGGGGCTGTCCCTTGCTCT 90300 28 100.0 32 ............................ TTTAACGGGCTTATATGCGTCCCCTGTCGTTG 90360 28 100.0 32 ............................ ATAAAATTAGACTTATTTAAACACCAAACGCC 90420 28 100.0 32 ............................ ACTTACTATCTATTTTAGTGGGCCAGATTGCG 90480 28 100.0 31 ............................ TTGTTAAATTTTCCTCGCTTGCTGTGTAAGT A [90504] 90540 28 100.0 32 ............................ GATCTAACAGCTCAAATAATTCTTCGTCGTCC 90600 28 100.0 32 ............................ AAAATATAAGCCTCACGCTTTGCGATCCGCTG 90660 28 100.0 32 ............................ TTAATTGGAACTCTAAAGCACGGCCATAGAAT 90720 28 100.0 32 ............................ TACTAACGTCGGGGCAGCGGTGCTAGGAGATA 90780 28 100.0 32 ............................ AAGATTTCCTTAATATCGTGAATGATAAAAAT 90840 28 100.0 32 ............................ AACCCGGTTCCGCACTATCGGAAAAATCTTCG 90900 28 100.0 32 ............................ AATTTCAACGGGTGGCACAGCCGCTTTTTTAA 90960 28 100.0 32 ............................ AACATGCAACTTAACCAACCTATACAACTACT 91020 28 100.0 32 ............................ TTGATTGGTAGTGACTACGTTATTAGTCCTTT 91080 28 100.0 32 ............................ TTTTGCACAGTCAAATGATCTTCAGTGGAATA 91140 28 100.0 32 ............................ TAGCTGGATGGCCGTGTCTATCATGCAAAATT 91200 28 100.0 32 ............................ TACAGATGCCGGACTCGTAACAAGCCTGTTAG 91260 28 100.0 32 ............................ TGTTTGAAAACAAGCGGGAAAAACACCCAAAC 91320 28 100.0 32 ............................ ATGACGACGCACTTTGTTGGATTAAATCAAGC 91380 28 100.0 31 ............................ TTAATGTTTTTGTTTTTAACATCATTGTATA A [91404] 91440 28 100.0 33 ............................ AATTCATAAAGTCGAATACTGTATTTACTTTTA 91501 28 100.0 32 ............................ ATGTGAACACCTTGTTTACTTTCACGTTTATT 91561 28 100.0 32 ............................ TATCTCAACATGCCAGACGTTCCGCAGATGAA 91621 28 100.0 31 ............................ TTGTCTTACTATATCGCTGAAAATGATGCTA A [91645] 91681 28 100.0 32 ............................ AAACACCGCATATGATCAACTGCAAGCAGCAG 91741 28 100.0 32 ............................ AGTAGTTGCTGGGCCAACTTTCACAATACGAA 91801 28 100.0 32 ............................ TCCAGAACATCTACAGCATCATTAAATCTTTT 91861 28 100.0 32 ............................ TTATACTTAGCTGGGTCTTGTTTTGCTAGTTG 91921 28 100.0 31 ............................ TTCTTCGAGCCTTTGTTTTTGGTGCTTTAAC C [91948] 91981 28 100.0 32 ............................ AAATAAAAGCACTAGACCAATAAAGAACGCTA 92041 28 100.0 32 ............................ AGCTTAATGAAAACATAATGAAAACCTTGCAT 92101 28 100.0 32 ............................ TGCTGCTTTAGCTACTGCTTTGGCTTCATCTT 92161 28 100.0 31 ............................ TTCTTTTGCATAAATTAAAAGAGCGAAAAAG A [92186] 92221 28 100.0 32 ............................ AAATTGAGGGGCAAATGGAAGCAATGTCACAC 92281 28 100.0 32 ............................ TGATCCATAACAGAATTAACATAGTATGGATT 92341 28 100.0 32 ............................ TACAGATCAAATCACACAAAATCCAATCATGC 92401 28 100.0 32 ............................ TTCTTTGAATTTGGAGCGTATATCAAAAGAAC 92461 28 100.0 32 ............................ TTTTGTCATATCGCTATATGCTTCTGAGCGAT 92521 28 100.0 32 ............................ TTCTGCAACCTCCGCAACTAGATACAAGTTGC 92581 28 100.0 32 ............................ TTGACCTATATTAGTCCTGGTCGCTTGAACTG 92641 28 100.0 32 ............................ TGCTGTTCTTCTCGTTGTGTTAAGAGAAGATG 92701 28 100.0 32 ............................ TTATGATGTTAAGCAATTTAACCAAACTAATT A [92725] 92762 28 100.0 32 ............................ GTTCTCATTGTCTGGTTTAGGTGGCGACACGA 92822 28 100.0 32 ............................ AAACAGGGCTAAAAACGCCAATAAATGCAAAA 92882 28 100.0 32 ............................ AATAAAACGTGCTTGAGCGTGATTTTCTGATA 92942 28 100.0 32 ............................ TTAAAAGGTATTGATGCTTTAAAAGGTGAACT 93002 28 100.0 32 ............................ TTTAACTTGTAAGCCTTGCAAAGATGCTTGTA 93062 28 100.0 32 ............................ TTTATTACAGCTTGGACAATCAATTTTAGTTA 93122 28 100.0 31 ............................ TTCTTCGAGCCTTTGTTTTTGGTGCTTTAAC C [93149] 93182 28 100.0 32 ............................ AAATAACAGTTGGTTCAAGTTGTAATAGGGCC 93242 28 100.0 32 ............................ GTAAAAAGTCTGAAAATAGTAAGCCCGAATCT 93302 28 100.0 32 ............................ AGTCTGGACTGCCTCTTATGCTAAGTACGCAA 93362 28 100.0 32 ............................ TAAACCTGAATTTTAAGCCAGATAATACTGAC 93422 28 100.0 32 ............................ TTTAATAACGATGTGAATAGGCGCTTCACGAA 93482 28 100.0 31 ............................ TTAATCAAAAACAAATAAGGCTGCGTAATGC G [93509] 93542 28 100.0 32 ............................ TTTTGGTAGACTTTCCATAGCGATTAAGTGCA 93602 28 96.4 32 ........................T... TATATGGCGCTTTTTTTATCTTGCGTACATTT 93662 28 100.0 31 ............................ TTACTTTGGGGCAGCTACAAAACAATAGAAT A [93687] 93722 28 100.0 32 ............................ TTGAAGCTCGGCAGATCTGAAAAGTACAAATC 93782 28 100.0 32 ............................ ATGTACAACAATTGGGGTGGATAAGTCTAACG 93842 28 100.0 31 ............................ TTCAATTAAAAACGGCTTTTCTGATGGTGGA A [93866] 93902 28 100.0 32 ............................ TCCTCAAGTGGATCATCGTCTTCATAGCTCGA 93962 28 100.0 32 ............................ ATCTAAATTAATTGAGCCATCATTGTTAATCT 94022 28 100.0 32 ............................ ACATATCATGAAAATTCGGATCATTTAGAAAT 94082 28 100.0 32 ............................ TAGTTCACGTATGCGCGGCTTACTTGAACAAT 94142 28 100.0 32 ............................ TTGTGCAGGGTTTTTTGATATAGCCAATTTAA 94202 28 100.0 32 ............................ AGCTCTTGAGTAACATTCTGATAAAATGTATT 94262 28 100.0 32 ............................ AACCAAACATCATTGCACGTTTACGTGACTGA 94322 28 100.0 32 ............................ AGATATATGGTTTTTAATCCATTCTGCAAGGC 94382 28 100.0 32 ............................ ATACATAAATAAAGGACTAAACGGAACAGAAA 94442 28 100.0 31 ............................ TTGAAAGAAACAATACCTGTTATTCATCGTG A [94466] 94502 28 100.0 32 ............................ TAACAGTGTATATCTGGAAATTCCCGTACAAA 94562 28 100.0 32 ............................ AGCAGCGCGAAACGAATGCGAAAGAGCGCGAA 94622 28 100.0 33 ............................ CAGTGACAGGCTTGTTTTTTGGCTCCGGCTTTT 94683 28 100.0 32 ............................ TCTACGCCAGAAGCTTTTTCAAACGTATCCCA 94743 28 100.0 32 ............................ TACGTAAATGTGTGACCTTGTTGCCCTCGTGA 94803 28 100.0 32 ............................ TGTAAGCGGTTTAGCCTTTCGACTATAGCCAT 94863 28 100.0 32 ............................ TGATCGAGTCGGTGCAGCCACAAAAACAAATT 94923 28 100.0 32 ............................ AGGATGAAAAATATTGTCTAGTAGCTGGGAAT 94983 28 100.0 32 ............................ CTATGAAGAACATTGAAATGGGCAATCCTAAA 95043 28 100.0 32 ............................ TGGGGGCCATGCTCTTCACATGGGATCTGAAC 95103 28 100.0 32 ............................ TACTTTTTCCATAGACTCACCTAAGCGTTCAG 95163 28 100.0 32 ............................ TAGACGGCCAGCCTTCAATTTTATCACTAGAT 95223 28 100.0 33 ............................ AACCAGCTTTACTTGCCGATGATTCGGTTTTGT 95284 28 100.0 32 ............................ AACCGGGCAGAGATTGAAGCGAATGACTGGTA 95344 28 100.0 32 ............................ GCACAAAGGCGTTTATCTTCAAAATTTACAAT 95404 28 100.0 32 ............................ TGTATTAATACCAAACGCACGTATAGCAATAG 95464 28 100.0 32 ............................ GTGACACCATCGGCATGATTGGTCACCTACCT 95524 28 100.0 32 ............................ CTAAATCTACCCATTTATTTGTAGAAGCCAGT 95584 28 100.0 32 ............................ ATATTGACCTCAGCCTCACGATCCGAAGGACA 95644 27 89.3 0 ....................T...-..T | ========== ====== ====== ====== ============================ ================================= ================== 92 28 99.8 32 GTTCACTGCCATATAGGCAGCTTAGAAA # Left flank : GATCTAACGAAATGGCTGGATCGCTTAACTGATTATCTGCATGTCACTTCGATTCGTGAAGTACCTGAGGCTAAAGTGACGGGCTACGCAATATATAGTCGTAAACAGGTTAAAACCAATGCTGAACGCTTGGCACGTCATGAGGCAAATAAAGGACGTTATATTTATGAAAACGCTTTAGCGCATTATCAAAAATTTATCACGACTACGGATTTACCTTATATTCAAATGCTCAGCCTAAGCACTTCTAATGAACAGGATAAGAAGCGGTTTAAATTATTTATTGAAAAGCGGCCTGCTGAAAAATCTGAAACTCAGGTTTTTAGTACTTATGGTTTAAGTTCGGTGTCATCTGTACCCGAATTTTAACCCAATATTTTTTCACTCTTTAACAGCTTAATAAAATCAATAAGTTATAGCGGTAGGTTAAAACTTGGGTCTTTTGTGGATTTAAAGGGTTAACTTGCTGTTATAACTTTATTTTTTGCTGTAAAATTACT # Right flank : TCTTAATACCTACACCTGATTACCATTTTTAAAAATGGTGACTGATCACCTGAATCACTCACCATATTCTTTGAGCCGAGTAGGGGGCTAGTTGTTGGCTTCTGGCAAATCAAACCAGATCACTTGAGCATCCTCCAGCGCCTTAATCTGACTTGCTTCTGTGAAAGCAATTGCACCACCAGCCGCTACAATATGTTCTGCAATCTGGACTGAACCGGAAATCACATGTACATAATTCACCTGCTGTGTTGCTTCAATCTCCAGAATTTGTCCTTTGTGAATCACTGCAGTTTTGACTTCAGTATTCTGGCGGATATGCATAGGGGCATTGTCATTTGGTCCACAAATCAAATGCCATTGGTTGGGCTGCTCGTGCGGATCACATTTAATTTGTTGATAGCTGGGTTCGGCATTCCGTTCATTAGGCACAATCCAGATCTGCAATAAATGCACCTGCTCATCGCCCTGGTTCATCTCACTATGACGTACACCTGTGCCGG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCATATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: F [matched GTTCACTGCCATATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.20,-8.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [4-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,0.37 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //