Array 1 95003-95631 **** Predicted by CRISPRDetect 2.4 *** >NZ_QUGZ01000006.1 Coprococcus sp. AF16-5 AF16-5.Scaf6, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ============================= ================== 95003 37 100.0 29 ..................................... CGTGTCCTCCCAAACGACTAATGAACTTA 95069 37 100.0 29 ..................................... ATCCTTTCATCTAAAAAAAATCACTATAG 95135 37 100.0 29 ..................................... CGGTTGCTTTGCGGCAAGAAGTCCAAACT 95201 37 100.0 29 ..................................... GAGTTCATCATTAATATACACATCTAATG 95267 37 100.0 29 ..................................... CTGCCACCACCTGAAATACCAATCTTTGT 95333 37 97.3 28 A.................................... AGATAGGCCTCATGCTTGATGATGACAG 95398 37 100.0 29 ..................................... TATAGTGGTTTCAAGCACTTTGATGTAGT 95464 37 97.3 29 C.................................... GGATTGCAATAAAACTTAATGCCCCTGTT 95530 37 100.0 28 ..................................... CTGCCCACCACCACCATAATGTATGCCC 95595 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ============================= ================== 10 37 99.5 29 TATTATAACATACCAAGAATAAAAAGGGAAATATGAC # Left flank : ATACATGGAGAAAAACATGTAATACATCATGCAATAGATAAAATGGTAGCAAGTTATAATTCTATTTTGATGGGTAATAAGGATGAGCTTGAAATCCCAGAATTGATAGAGCTGGAAAGACATAATTATGAGTAAATTTATGAGATTGATTGTATTTTTTGATATTCCAACAAAGACGAAGAAGGATAGAAGATGCGCATACAGTTTCCGCAAATTTCTGTTGAATGATGGATATTGTATGTTGCAATATTCGGTATATGTTCGTGTGTGCAATGGGATGGATGCGGAAAGAAAACATGAAGGGCGTCTGAATGAAAATCTTCCAGAAACGGGTTCTGTAAGAATGTTGGTTCTCACGGATAAACAGTATTCTTCGATGAAAATACTGGTGGGAACAACAAAAAAAGAAGAAAAAGGTAGCATAAATTTGCTGGATATCATATGATTTTTTAATGTGAAAAAGCTAGGATTTGTTGAAAATCCTAGCTTTTTTGCTACCC # Right flank : CATCGTTCACAATGCAATAGATACAAAGAAAGCCGGAACTTATGAAGTGACATATCAGGTAACAGATAGTCAGGGTGCTACTGCTACAAAGACGGTTAAAGTAACTGTTAAGCCTGCACCGGTTAATCCAGATACAGATAAACCGAATACCAATAAGCCAAGTAATGATAAAGGCAGTGTAGAAACAGGCGATAGAAATAATCTTCTATTGTGGGAAGTCATGTTGATTGGTTCAAGTATCCTTCTGTTATACAGTCTGTATCGTAAAAAACGAAAAACAAATCAATAACAACTTATGAGGGTAGTTGCCTAAATACAGGCACTGCCCTCTTTTCACAAGAAAGCCTTTTTGAGTTAATTGGAGAAAGTGTTGTTCATGGGGCCAGGCACCAATGGTGCTGAGTTAATTGGAGAAAGAAAAAAATATTTACACTGAATATTTTAGCCTTTTGGGGCTATAATTTTCAATGGCAACTTGAAAACCTGATAGAAAACACATA # Questionable array : NO Score: 3.23 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TATTATAACATACCAAGAATAAAAAGGGAAATATGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.68%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA // Array 1 68906-70383 **** Predicted by CRISPRDetect 2.4 *** >NZ_QUGZ01000001.1 Coprococcus sp. AF16-5 AF16-5.Scaf1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================= ================== 68906 36 100.0 26 .................................... GATGGCAGTATAGGGTTGATAGCGGC 68968 36 100.0 26 .................................... CCGCATCTTCCCAGGCATGAATGAAA 69030 36 100.0 29 .................................... AGCGGAAGAAAACAAAAGTGTTTGCAGAC 69095 36 100.0 26 .................................... ATTCCTATATCGTTATTGCTATACCA 69157 36 100.0 27 .................................... TCCTACCGTCAACTTATATGCTGTTTC 69220 36 100.0 28 .................................... ATCACTGACAATAACATGGATTTAATGA 69284 36 100.0 27 .................................... ACCATCAAATACGGTTAAAAAAATTGA 69347 36 100.0 27 .................................... TGATCTTGTCAATAGCCTGTTTCATCT 69410 36 100.0 25 .................................... ATAGACACCGCTTGCAAGCGTAACC 69471 36 100.0 27 .................................... ACTCGTCAAATATCTTAGCGTAAGTAG 69534 36 100.0 28 .................................... AGACATCGTACCGCTATTATACTGATTC 69598 36 100.0 26 .................................... TATCCGGTATTACTGTCCCGGCTAAT 69660 36 100.0 27 .................................... TTGTATATATAATATATAGCTAGAGAG 69723 36 100.0 26 .................................... ATTCAGACAGTGTTAAATCAAACTAA 69785 36 100.0 26 .................................... TCACCGGTTCTCCAGGCAATTATCAT 69847 36 100.0 27 .................................... ACTAATTGAACCTGTGCAATCTACATA 69910 36 100.0 26 .................................... AGTGCTGGGTGATAGAATATAAACAT 69972 36 97.2 25 ..........T......................... CCGGACTCTATCCTCTAGGTCTGAG 70033 36 100.0 26 .................................... CTGCCTACCACGTACTTAGTTCTTGC 70095 36 100.0 27 .................................... CTATGTCACTTCTTGTCTTTTTCTTAT 70158 36 97.2 27 ...........A........................ GGCAAAGCAGAAGTAAGAGCTTGGTAT 70221 36 97.2 26 .........A.......................... TCTTGGGAAAGTTACAAGCAAGTTTG 70283 36 100.0 29 .................................... ATAATACTATTCCAGTCTCATCTTCCCAT 70348 36 97.2 0 ...........................A........ | ========== ====== ====== ====== ==================================== ============================= ================== 24 36 99.5 27 GTTGAGTAACCTTAAATAATTTCTACTGTTGTAGAT # Left flank : AAGGTACTATAGATTTTTTATGAAAAGGAAAAGTGTGGAACAATTACCGACTTTTGAATTACATTAGAAGTGATAATGTTCAACAGGGGAGGCGTATATATGATCGTTGTGAGTTATGATATATCAGATGATAAATTGAGAACAAAATTTTCCAAATATTTATCCAGGTTTGGACATAGATTACAATATTCAGTATTTGAAATTGATAACAGTCAGCGTATAATAGATAACATAGTTACTGATATAACTAATAGATTTGAAAAAAACTTCACACAAGAGGACAGTGTCATTATATTTAAGATGTCATCGAGTTGTGAGGTGTTAAGATTTGGTTATGCCAAGAATGACGAGAAGAATTTTATAGTTATTCAGTAATGCAAACCTCAGTCTTTCTGAGAAAAAATTAAGGGGTTACTCAACAGATATGAACATAACAAACAAAAAAAGACTGTATATAGTGGTTATAAAACAAAAAAATTGTGCACAAACACCAATTTGGA # Right flank : TGCGTTTGCGACACGTCTAGCTGTTAGTGTTGAGTAATCTTATGTAGATAGAGTAATGTAAATTTATAGAATAATGACATTATTTGTTAACCGCAGCACTTACCACTGGTGGATATATTGACGTGATAAAGTACAAAAAAACAATGATGATATATGATGGGAGAAAGAGATATGAATGACAAGACAAATACTTTAAAATCCGCCATCTACGGTCTTGCCGTAGGCGATGCGTTGGGCGTTCCGTATGAATTTAAATTCAGGGGCGCATTTGAGTGTACAGATATGATAGGCTACGGTACGCACAATCAGCCGGAGGGAACCTGGTCGGATGATACCAGTATGGCGCTTGCCACTTGCGCCAGTATCAAAGCATGTGGCAGAGTTGACGTGGATGATATCAGAGACAGATTCCGCAGGTGGCTAAAAGAAGGAGCATATACACCGTTTGGAGAAGTGTTTGACTGCGGAAATACGTGCGCTGCGGCTATCAGATCTGGAAG # Questionable array : NO Score: 6.08 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:-0.14, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAGTAACCTTAAATAATTTCTACTGTTGTAGAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.22%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.70] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [73.3-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.68,0 Confidence: HIGH] # Array family : NA //