Array 1 3761-4456 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACJOV010000065.1 Leptolyngbya sp. FACHB-671 contig65, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================== ================== 3761 37 100.0 36 ..................................... CGAGAAACCCGCAGGTTTGTATCAGCCAGCTCTTTC 3834 37 100.0 37 ..................................... TTAATAGCCATAATTCGCAGCCTCATTGCGATGATTG 3908 37 100.0 36 ..................................... ATTCCAGCACCTTTTGATCAGCTTGCTACTTACGAA 3981 37 100.0 35 ..................................... TTGTCCCCTCCTCCTGCGCGATAGTGCATCTAATC 4053 37 100.0 36 ..................................... ACGAACTCGCTCATATTCTTCGCCAGTAAGCTGGCT 4126 37 100.0 36 ..................................... ATGTTGCTCCTAATTGAGTAACAAGACTCTTTTGCT 4199 37 100.0 34 ..................................... TAAATGTACCCCTCGTCATAGGGGAGTCCGAAGC 4270 37 100.0 40 ..................................... AGGACTGTGGTTGGTAGCCGGAGTGCAAACACAACTGATG 4347 36 89.2 37 .....-.........C.....G...........G... GATAGGGCTTTTGATTCTCGATTTATGCAAATCGTCT 4420 37 83.8 0 .............C.........A..C...G...GG. | ========== ====== ====== ====== ===================================== ======================================== ================== 10 37 97.3 36 GGCGCAATCGCCTTTTTGGATACGGGTAAGTTGAAAG # Left flank : TCTGCTTAGCATTGAAGTTTTGGTGATTTTTACGGTACATTAGTACTGGCGCACGAACCAGACTAGCGTCACTACGATGCGAGTTTTAGGAAATGGGACAGGTTCATTGCTTTCCGTCCCTAGCACTGCCCGCTTACTCACGCTACCGCAAGGTGGGAACAATTCAGCGCTGTGAGTTCGCGATTCTCTACTGTTTGTGACAAACGTTTGTTTGCCTGGCAGTACAGCAAGATTGTGTATCAGACCAAGTTTGGCGAAGATGCATGGCAGGCTGAATCGCCGATGAAACCATCGGACTTCCCCTAAATTTTTGGCAAACCGAAGCGGGATGAAAAATCCCAGTACCTTTGCCAAAGTTCTAAAATCCCCATCAGTTCAAAGGTTTGGCAGCATAAGTAAACTTTCAATCCAGACTGAATCTAATTTTTTTAAGATGCTGCATATACCTTTGGCAAAACCGCTGATGAAACTCAGACCGATGAAAGGTTTTAGACTATAGA # Right flank : GCATATCTCTTTCTACTTGATAAGTGTCTGCGGGGAGTTGAGAGACGAAGCGTGACGATCCCAATGTTTAAAACTGTTTCGCTGAGCTTGGGTCAACTAAGAAACAAATTACCTTAGTTTCCAGTACGACATCCGGAGCACAGTCATCTTTTGAGACATCGTTGAGCTCGTTCCGCATTCCTTAGCCATTCCAATTTTTCTGTAGTAGCGAAACTCTGCTTCTTGCAGCGATCGCTTCACAACGCTTAAATATTTGCAGACCCCTGCCTCTTTCCCTTCCCCCTACAAGTATTGTGAGAGATGAGCAAACCTTTTTGCTTGCCATAAGGCAAGACCTATCTCGGGAGTAAGCTAAAATTTTGGAGTATTAGGAATTAATAGGTCTTCGGAATTGACATATATTCCTTCGCTCTCACCTACAAGTTGACACGTATTCCTTCGCTGTCTCTCACGAATTGACACGTATTCCTTCGCCTATCCTACGAATTGACACTCAATTC # Questionable array : NO Score: 3.12 # Score Detail : 1:0, 2:0, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGCGCAATCGCCTTTTTGGATACGGGTAAGTTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.35%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.80,-0.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [61.7-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0 Confidence: HIGH] # Array family : NA // Array 1 138-464 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACJOV010000085.1 Leptolyngbya sp. FACHB-671 contig85, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ==================================== ================== 138 37 100.0 36 ..................................... GTACTCGAAAATCACAGCAAAAATAATGTGGTTTAT 211 37 97.3 35 ........T............................ CCATTGCACAAGAGACATGCAGGAGCAATGGAGGG 283 37 100.0 35 ..................................... ACACAAAAACTTCGGTTTCCTCAAAATTAGCTAGC 355 37 100.0 36 ..................................... ACCTAAACTGACGGTGATTATCGGGCTTCCCCGATC 428 37 94.6 0 ......G.T............................ | ========== ====== ====== ====== ===================================== ==================================== ================== 5 37 98.4 36 GTTGCAATCACCTGTCCGAATTGGGGCAGGTTGAAAG # Left flank : GTTAGCTTCTCGTTGTCTTACTCTTTCAGCCATGCCAGACACCATTCGTGGACACACACTTTTTCATTGGTGGAAGGAGGAATAAATTAGTGTCACTCTACCATCCGGATTCCGTATCAGTCTCTTGGAGAAGCACCG # Right flank : GGCAAGCAATGAAGAAGTAGAGACAATAGTCTCAGAGATACTTTTTGAAGTGGGTTGAAAGCGAGTCCAGTTGTGTCCTTAAGGACTAGATTCAGCGACATTAATTTGTCACTAGCAACTCAGCGACACTAACTTGTTACAACGACATTAATCTGTCACCAGCGACAAATAATGTGTCACTGTACACTTGTGCTTTCGACGACAATAATGTGTCACTGTACATTTTTGATGGACACAAGTGGACTCGAACCACCGACCCCTACGATGTCAACGTAGTGCTCTAACCAACTGAGCTATGCGTCCGAACAGTTAATTAATATAGCACGGGTTCTGCGTTAGGCACAAATAAATTTTGTTGGGGATGCCAAAATTCAAAAGGCTGTCACAATTGAAGCTGAGGTTTTGCGTGTGGCGAGAATTTGTAGCCTTTACGCTCAAGTTTCTACCTACCAGTGATGCCAAACCTAACTGACGTTGTGGGATAAATGCGGTGGCTAGAG # Questionable array : NO Score: 2.98 # Score Detail : 1:0, 2:0, 3:0, 4:0.92, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGCAATCACCTGTCCGAATTGGGGCAGGTTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [9,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-14.10,-8.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [55.0-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA // Array 1 35756-35503 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACJOV010000128.1 Leptolyngbya sp. FACHB-671 contig128, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ===================================== ================== 35755 36 100.0 36 .................................... TGAAGCGGTTGTGTTTTGACTGTGATAGTTTTGGTG 35683 36 100.0 37 .................................... GGGCTAGAGCGCTTTGCTGACGAAGAAGCGATGGCTT 35610 36 97.2 36 .............A...................... AAAACTGGGCACTATGGGCGCAACTGTACAGAGCAT 35538 36 97.2 0 ....G............................... | ========== ====== ====== ====== ==================================== ===================================== ================== 4 36 98.6 37 GTGCATTAGCAATGGATGCCATTAGGTGTTGAGTAC # Left flank : TTTGGGTGAAAGCCGCGATTTAGTTAACGCAGTAACTCTAATTACAAACTTAGATGGAGAATCAATACGATGGTTAGTCCAAGATGAACAGGGGTCCTTAAGGTTGCCTTACTGGGTTGACCATGTTGGCTCAAAAGGAACTCGTTGGTTGAGATATTTGATTCAGAAGGTAGACTCGTACCAACTTCCTGATTCTGCTTGGACTGCAATTCAAGCCTCATAATGCAACGTCCAAGCTTTGTTACACTGATTTGCAAGGATGTCTTCCTGTTTCATCTAAATTTGCCAGGTTAATGAACAGAAGCCTTTGTACAGCAGGCGTTTGAGACTTTAGGGGTAAGTTGAGGTGCTTGCGTTGCTTAAAAGCCAGTCTGAACAAAGGTTTTAGTCATTCAAATCGACTAACTTCTGTCAAATTATGAACTCTTGTTCTACTTTCCTTGGAGGTGCTTGTAAAGTAAATCTGTGTTACTTGATGAGCATAACTTTTAAGGAGTGCT # Right flank : TAATCTGCACGTTGTATAGCTCAGTGGTTCCTGTGCGTCAGTATGGGTATTGTTAGGCAGTTTGCTCGACGGTTGAAGTATGGGAGTAGCTTTTTAAGTAAAAAGGTCGAGGTTTTTAGTTTTGAAGACAGAGAATTGTATTCAAGACAGGATTAATTTTGCTCAAAAGCCAAAGTTTCGTGTGTAGAGGCTGACGTTCCGGGATTTGAGGATTAAGGATGGAGATTTAAGGGGGAATACTGTAGCGTGACTGCTTGCGCTCTCTAACCTCTTACTAAAATCGTCAAACTGTCTCATGCCCTCGATACCCGAAGCGATCGCCAAGTCTGTCCAGTTTTGCCAGCAGCATGTTAGAGCCGACAAAAAGGGAGAAGCACAAGTATTTTTCGATCGCTTGGTCATGCAGGCTTACGGCTTCAATGATAGCGACGACATTCTAGAAAAGCTACTGACTCTCAATCTCGAACTGGCAGAGAAAGAGAAGCAGGGTGAACCTGTGG # Questionable array : NO Score: 2.79 # Score Detail : 1:0, 2:0, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCATTAGCAATGGATGCCATTAGGTGTTGAGTAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-4.40,-4.40] Score: 0/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [53.3-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.68 Confidence: HIGH] # Array family : NA // Array 1 1-308 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACJOV010000003.1 Leptolyngbya sp. FACHB-671 contig3, whole genome shotgun sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ========================== =============================================== ================== 1 23 88.5 44 ---....................... GTGAAAGATCTTACAAGTGCCTGTGCTGCTACGATGTCGCAGAC 68 26 100.0 47 .......................... TCAGGGATTAAGCCTAAGCTGGTTCGGGAGGTTCGGCAGTCGCAGAC 141 26 96.2 43 ............G............. TTGGGATCTAGGACTTGTGGCCGTGGTGAGTCTAGTCGCAGAC 210 26 100.0 47 .......................... GCCACTGTATGCCTGCCAACCGAGGACAAGAAATTTCTGTCGCAGAT 283 26 96.2 0 ...........C.............. | ========== ====== ====== ====== ========================== =============================================== ================== 5 26 96.2 46 CTCTGATGCCGTAAGGCGTTGAGCAC # Left flank : | # Right flank : CTAGATCTTGACCTACATCAATCAACTGACAGTTTGCTTCTGTGATGAACTAATTCTTTCTAGATATTTGTTGTTCAATGACAACACCACACTGGTCGTGAAACCAATCACGAGCTACGGAGAAATTGCGATCGCTCTCCAGATAAATTGCTCCCATCAACGCCTCAAACATTTCTCCAAACATATCGCCCTTCTTGGCAGTTTCATTAATGCTGCCTCCCACGCGACAGATCTGATCAAGCCCTACGTGTAAAGCGTACCAATACGCCCCTTTCCGTCGTTCCTTTAAGGGTTGAGATTTCTGAGTGAGATTTCCTTGATCAGCATCTGGAAACTCATGAAATAAGTAATCGGTGACAGCAGCGTTCATGATGCCATCACCTAAATGAGCTAGCCGCTTGTGTTGCAACCTTAATTTCTGGCTCAACTGAGGCTGATTCTCATGAGCCTCCTTGGTATAGCTGTTGTGGCTGAGCGCTAATAGAACGGTCTCGTAGTCC # Questionable array : NO Score: 5.79 # Score Detail : 1:0, 2:3, 3:0, 4:0.81, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:0.92, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTCTGATGCCGTAAGGCGTTGAGCAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-6.20,-4.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [1-1] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [0.0-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0.37,0.37 Confidence: NA] # Array family : NA //