Array 1 608880-604579 **** Predicted by CRISPRDetect 2.4 *** >NZ_KQ033859.1 Bifidobacterium asteroides strain Bin2 Bin2_scaffold5, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 608879 29 100.0 32 ............................. CGGGGGCGGGCTCCTCCATATCACCCTGGAGA 608818 29 100.0 32 ............................. CGATCAGGATATCAGCAGGCCGAACATATTCA 608757 29 100.0 33 ............................. GTTATGCCGGCTTTGGTCACAAAATCATCACAT 608695 29 100.0 32 ............................. GCTTGTGAGCTGTCTTTGCGTAGCCTGCTCTG 608634 29 100.0 32 ............................. TGTCCATTGTCGCCGGATATGACGCCGGTCTT 608573 29 100.0 32 ............................. GAAGGAAGCGTGATGCGCACGAGCGGCTGATC 608512 29 100.0 32 ............................. CAGGTCGCAAAGGTTGCTGAGATACTTTCCGC 608451 29 100.0 32 ............................. CATCCACGGATCATCCCAGCAGGTCATCGCAT 608390 29 96.6 32 ............................T CCCAGTAGCGCAGTCCGGTCTCGTCGTCCAGA 608329 29 100.0 32 ............................. GGGCAGGAGAGCAGGACCATGGGTCGCACGGT 608268 29 96.6 32 ............................T CTCCGGTATTGATGGACCGAAGCAAAGGCTCA 608207 29 100.0 32 ............................. ACCGTGCCGCTATCCACTACAACCCGCACATG 608146 29 100.0 32 ............................. AACTGCCAGCAACCCGGAGCAACTGGCAAACC 608085 29 100.0 32 ............................. TGATGTCCTCGTCCGGCATCATGCTCATGCTG 608024 29 100.0 32 ............................. CGTTTCACCGAGCGTTACAACGACAAGGTGAA 607963 29 96.6 32 ............................T GCAGATCCTGCCGTCCGCTCACGTCCAGACCG 607902 29 96.6 32 ............................G CCCAAATAGGCAAACACTCCGCTCACATCCGG 607841 29 100.0 32 ............................. CGACTGGTCCCCTCTTCTCGATTCCTCGGCCG 607780 29 100.0 32 ............................. CAGCCGGCGAGGTTGACGCTGATGGGCTGGGG 607719 29 100.0 32 ............................. AAGGATCACTTTCTCCAGCAGACCGGCATTGA 607658 29 100.0 32 ............................. TTTTCATCCCAAGAGGGCACTGTATCTATCCC 607597 29 96.6 32 ............................T CATGGACATCATCCACAAAAACAGGGGGACAA 607536 29 100.0 32 ............................. TCCCGAAAGCTTGCCTGATGACCTTGAAGACC 607475 29 100.0 32 ............................. GCCGCCGAAGGGGTCGAATCGTGTCTCGCTCA 607414 29 100.0 32 ............................. GCAGCGTATACCCGAATCAACTGGTGGACATG 607353 29 100.0 32 ............................. ACACATGCGGGAGCTGACAGAGTGTGACTATG 607292 29 96.6 32 ............................T CGTAGATGCCCTGCCTCCAGTCGCCGCGCAGG 607231 29 96.6 32 ............................T CGGCATGAAAAAGCCGCCCGGATGGGCGGCGG 607170 29 100.0 32 ............................. CACATCGCCTTCCGTTGCTGCCTGGCTCGGGT 607109 29 96.6 32 ............................T CCGCTCTCGTCAAGGCCGTTCAGCCCGTCCTT 607048 29 100.0 32 ............................. GAGAAGCTGGCGCAGACACCCGCAGGGCAAAT 606987 29 100.0 32 ............................. CTGGCCGACCTGGACGCCAGCCAGCCCGTCTG 606926 29 100.0 32 ............................. AAGCAGGTCGAGTCCAAGCAGGCCGACTTTGC 606865 29 100.0 32 ............................. GTGACCCTATGGACGATCTTTGCATGATTCTC 606804 29 96.6 32 ............................T TTGTGGATCAGTCCGACGAGGGTGCTGTGACC 606743 29 100.0 32 ............................. CGTGACCGCCTCATCCCAGTGCGTGCCGGGGT 606682 29 93.1 32 ..........................T.T GGAGCGTCGTCAACGGGATCCTGGGCAGGGGT 606621 29 100.0 32 ............................. CGTCCGTCGACTTCGCGGACCTGGCCCAAAAC 606560 29 100.0 32 ............................. GAGTCCTACCCGCAGGGCACGGTCAGCGTGAC 606499 29 96.6 32 ............................T CTGGGCGGCCGGTACCGGTAGCCGTTCGCATC 606438 29 96.6 32 ............................G GCATTCGTATTCAGCGACTACGACGAAGGGGA 606377 29 96.6 32 ............................T GGCCAGAAAGGCGACATAGGCCCGCATGGCCC 606316 29 100.0 32 ............................. GGCCTGCCGGAAGCGGCCCGGAGGCTCCCCCT 606255 29 93.1 32 ...........................TG GCCCGGCCGGCACACGCCTGGCCATGCAGGTC 606194 29 96.6 32 ............................T ACGAGTTTTGAAATTTAATCGATATTTTGCAG 606133 29 96.6 32 ............................T GGGGGCACGGGTCGAGTTCGTCGAATTCCCGT 606072 29 93.1 32 ...........................TG CCCGACATGGACCCGCCCTCACCGGCCGGGGT 606011 29 96.6 32 ............................T CCGAAGGATTGTAGGATTCCTCGTATGCCTTG 605950 29 96.6 32 ............................G CATCAAGGACATGACCAAGCCCACCGAAGAGG 605889 29 96.6 32 ............................T CGGCAAGCATGCGGCAGGCGCTGTCACACCGA 605828 29 96.6 32 ............................T CGTAGGGGCCGACATGTCGACCCAGGGCCTGC 605767 29 96.6 32 ............................T AGACAAAAACCCATGCATATAAGCGCCGCTGG 605706 29 96.6 32 ............................T CACGCACCTGCATATCCAGCATTCCTCTATTG 605645 29 100.0 32 ............................. CCGACGATCGTCAGGGTGTCTCCCTTGTAGTC 605584 29 96.6 32 ............................T GACCGCCAACGAGGATTATCTCAAGGGCATGG 605523 29 96.6 32 ............................T GGGTGACGGTCTCGATGAAAAGCGTCGTGTCG 605462 29 96.6 32 ............................T CACGGTGATACCGACTATCAAGACCACGATAC 605401 29 96.6 32 ............................T TCACAGGTCAACCATTCGTTCTTCGACTTGGA 605340 29 100.0 32 ............................. GTGCTGTGGAATCCGCCGATCCTGCTGTACTG 605279 29 96.6 32 ............................G CTGTTCAACGGCCAGGGGGCCACCGTGGCCAT 605218 29 96.6 32 ............................T CTTGTCGATGAACATCATCCGTGTGCCTAGAC 605157 29 100.0 32 ............................. CCGGACTGCGACCGTGTGGTCCAGGACTCGCT 605096 29 96.6 32 ............................T GTGCGCCCGACCTGGCCTTCGTCGGCCTTGGA 605035 29 96.6 32 ............................T TGCAGCCAGCTCAACGATCTGGCAGAGACCAG 604974 29 100.0 32 ............................. AGCGCAGCAGCGTCGGCCAAGCAGGCGTCGAA 604913 29 96.6 32 ............................T ACACTGCTTAAAGCTGTACACTTTGCTGATTC 604852 29 100.0 32 ............................. CCACAACAGCAGTACCCGCAAAACCAGCAGCG 604791 29 96.6 32 ............................T AGTTCGCATAACGGCTGATGAGTGTCATTAAT 604730 29 96.6 33 ............................T ACAGCCCGATATTGCTTGCTGATCCACCGTTTA 604668 29 96.6 32 ............................T TCTGCGTAGTCGTTAAACGCTTGCTTGCTATC 604607 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================= ================== 71 29 98.2 32 GTGCTCCCCGCATCCGCGGGGATGATCCC # Left flank : GCCACGTCACAGCTAGGGTCCGAGACAGGCTTTGGGAACGCATCACAGGGCAAATCCGAACAGGCAAGGCCATTATGGTCTATTCCGCCCGCAATGAGCAGCATCTGGCATTCAAGGTGCATCGCTCGGATTGGAACCCAGTTGACTGTGAAGGATTGGCTTTTATGGAGAAGCCTGCTGATGGTGGCGATGGCAGATCCGCAGGTGGTGGAAACCGATACCGTCGGACTGGTTGGAGCAATGCCAGCAAGTACAGACGTGCGGCAAGGTTTCGTCGCTCGCGTTCCAGCTGAGCGCAACCGGATCTGTGTACCTTTCAGATGAGCTTTACCGATGAGTGCTGAGCACTGATTACTGGGTGAATGCATGGCTAAGGAGCTCTGTGTAGATGGTCTGAATTGCAGCGGCTGAGACGGAAATAGAGAGGGTTCGAAATGCAAACTCATTAAAAATTAGAGATCTTGTCTATTATATTGTTGGGATTGCAAGGATTTCTAAGT # Right flank : TCGACCATGCTCTTCAGTGTGTCGTTGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Questionable array : NO Score: 5.91 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.74, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCATCCGCGGGGATGATCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCATGCGCGGGGATGATCCC with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [23.3-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.14 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //