Array 1 187716-188075 **** Predicted by CRISPRDetect 2.4 *** >NZ_LHUL01000003.1 Clostridium botulinum strain ATCC 25763 contig_3, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 187716 30 100.0 36 .............................. AATTTTAATTGGCTATCAAATACTTTTTTAGAACTC 187782 30 100.0 36 .............................. GGCATCATTAAATTATAATATTTAATAAATTCTTCT 187848 30 100.0 36 .............................. ACGTTATTTTTACCTTCATAAGCTTTTAATAATTTT 187914 30 100.0 36 .............................. TTTGTAAACCCTTCTTCCTCTGTTGTTATTATTAAA 187980 30 100.0 36 .............................. CTATTTCTAGCCATTCTCTCTATATCAAATGTATCT 188046 30 96.7 0 ......T....................... | ========== ====== ====== ====== ============================== ==================================== ================== 6 30 99.5 36 GTTGAACATTAACATGAGATGTATTTAAAT # Left flank : AAATATGTTCTTGGTTAAACCGTAAAGATGAACTTGTAGCAGCAGTAGCTATAGGATATGTAAATCAACCCCCTTATCCACGTCCACGTAAACCGTGGAGAGAAGTTACAGAATGGATGAGTTAATACATTTAACATCAAACAATAAAAACGGAGAATTATTTTAAATACCGTATTATTTATAATTGAGTTCCATAGTGTTTTTACACCGCAATACAATTATATTGCAAAGTTAGATGTATTTAAGTAGTAAATATAAATCTGAGATTTAGTGTGAGGTGCTTACTCATTTGAGGAAGCGAGAAGGCGTTCTACTAACTGAATTTTTCCAGCCAAAATAAATTTTAAAACCTATTTTGAGCGTTGACACATAAGGCTTATGGTAGATTTTTATTTTATATTTGTAAAAAAGCAAAACTACTTGGAAAACTTTCTTTGAAATCTTGTAAAATCAATGGTTATATGCTATTCTTAAAAATCAGGAATGGCTATTTTACTATG # Right flank : TATTATATCTCCTCTTGTAGCGGGAGTTCCTATACCTGTTGAACATTTAAGTTCCTTTTAGGTGCAATTCTTTTTGGGTTATTGACTTGTTAGTCTAAAGCTACACCATAAGAAAGTTCATTAAACACATGTGGAAGAACAAGTAATAGATACAGCACTTGCTATTGATATGGTGAATTGTATTACAAATAACGAAGGTTTTATCTAAAACTGTTCATATGGCTGGATTTAAGAAATATAATAGTGTTCTAAGTTGTATCATAACCTAAGTAAATTATAAGAATATATGGTTATATTTATTTTAAGACTATTGTATTAATATGATTCATCCAGATTTAATTGTGAGAAATTTCATTATAAACTTAATAGGGAAGTCTTAGATTTTTTATTGCATGAGATTATACGTAAAATATTAATTTTCACTATAACTTAACAAATGATTGATACAATTTTAAAAAAATCAGGACTTACAATGATAAAGTAGGTCCTGATTTTTATTA # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACATTAACATGAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.50,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [73.3-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0 Confidence: HIGH] # Array family : NA // Array 2 195291-196038 **** Predicted by CRISPRDetect 2.4 *** >NZ_LHUL01000003.1 Clostridium botulinum strain ATCC 25763 contig_3, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 195291 30 100.0 36 .............................. AAAAAAAAGTAAAAAAAATGAAGAGGAAGAGTATTT 195357 30 100.0 35 .............................. AAAATTAAGTAGTAGGATGGAAAGATTCCTAGGAG 195422 30 100.0 35 .............................. GGCAAAACATTTAATGCTTGGGCATAAAATTCTTT 195487 30 100.0 34 .............................. TATCAGTTAACATCTCAATCACTCCCTTGGTTTT 195551 30 100.0 36 .............................. AGAAATAGTAAATGGTAATCAATTAGATAATAAGAG 195617 30 100.0 36 .............................. AAAATTATATTCATGTAGTTAACATGGTGAATGATA 195683 30 100.0 36 .............................. AATTTCACATGAGCTATTAAAGGTTGATAATAAGCT 195749 30 96.7 35 .................G............ ATCTCAGAAGGTGTAAAATTATTACTTTCTGATAA 195814 30 96.7 35 .................G............ CTTTTCCCGGAAAGAAAAATCCAAGACATAGAATT 195879 30 86.7 34 ........TC......AG............ CCGAGTACTGGAACTTTATCTTCTAATTTAATAT 195943 30 90.0 36 ........T.......AG............ CAAACAATAATTCCATCAATTACATTATTATTTTTT 196009 30 86.7 0 ................AG..........GC | ========== ====== ====== ====== ============================== ==================================== ================== 12 30 96.4 35 GTTGAACAATAACATAGAATGTATTTAAAT # Left flank : TCAGCAAGAAAACAGATGAAGGATTTGTTTTAAATACAAATGGAGAAGAATCAATTATTAATGCTGATAGTGCTGTTGTAGCTATTGGATATTTATCTGAAAAAGACTTATATAGTGAAGTTAGATTTGATATTCCAAATGCAAGACTAATTGGAGATGCTAATAAAGTTCAAAACATTATGTATGCTATTTGGAGTGCATATGAAGTAGCTAAAAATATTTAAATAAACTTTTGCAAAAAACTAGAATGGGTTTATATCCATATCTAGTTTTTTGTTTTTTACTTAAATTCTATAAGTATATGAGTGTTTGTCAGGCTATATTTTCCCAAACGAATTCAAATTTAAAGCTTATTCTAAGCATTGATATATAAGGATTAGAATAGGTTTTTATTATGAATTTTTAAAAAAGTAAAATCACTTGGAAAAATTTCTGTGAAATCTTGTAAGATCAATGGTTATATGATATTCTTAAAAATAAGGAATGGCTATTTTACTATG # Right flank : CAGGAAACCCAAATCTTTGATTTGGCATGAGTCGCTTACTCCTTCGAGAATGGGAGAAGGAGTTTCATTAATGAGCATAGTATATATTTTATATATAATTAAATTTCCCCAAGCGAATTCAAATTTAAAACCTATTCTAGCCATTGATATATAAGGATTAGGATAGGTTTTTATTATGTATTTATGAAAAATAAGAATCGGTTGAGAAAATTTCTATAAAACCTTGTAAAATCAATGCGTATATGTTATTCTTGAAAATAAGGAATGGCTATTTTACTATGGCTGAACCTTAACATAGGATGTATTTAAATGATATTATTGTTACATTCTTAAAAGGTTCATCTTTTGTTGAACCTTAACATGAGATGTATTTAAATTAATTAACTGTTTTATCTGGTGTATATGTGTTCCCGTTGAACCTTAACATGAGATGTATTTAAATTGGCAAAATGTTTTGAGAGTTGCCTGTCCTGGAATAAGTTGAACCTTAACATGAGATG # Questionable array : NO Score: 6.08 # Score Detail : 1:0, 2:3, 3:0, 4:0.82, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACAATAACATAGAATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-11] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.68,0 Confidence: HIGH] # Array family : NA // Array 3 196319-196858 **** Predicted by CRISPRDetect 2.4 *** >NZ_LHUL01000003.1 Clostridium botulinum strain ATCC 25763 contig_3, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =================================================================================================================== ================== 196319 30 90.0 36 .C.............AG............. GATATTATTGTTACATTCTTAAAAGGTTCATCTTTT 196385 30 100.0 35 .............................. TAATTAACTGTTTTATCTGGTGTATATGTGTTCCC 196450 30 100.0 37 .............................. TGGCAAAATGTTTTGAGAGTTGCCTGTCCTGGAATAA 196517 30 100.0 36 .............................. ATATCTATATAATTAAAATCAGCAAATTCCTTTCTC 196583 30 90.0 36 .......AG......A.............. GAATCTATAGTAGTTTCATTTGTTAAACCAGACGAA 196649 30 90.0 115 .......A....................GC AGAGAACCCAAATCTACGATTTGGTGTGAGTCGCTTACTCATTCGAGGTGAGGAGAATGAGTTTCATAAAACAATCAAAGCTTTATTATTTTAAAATTAAATATGCTTTTAAATC 196794 30 86.7 3 T................A........T.C. ATG GC [196814] Deletion [196829] 196829 30 80.0 0 .......AA......A..........G.GC | ========== ====== ====== ====== ============================== =================================================================================================================== ================== 8 30 92.1 43 GTTGAACCTTAACATGAGATGTATTTAAAT # Left flank : ACAATAACATAGGATGTATTTAAATCTTTTCCCGGAAAGAAAAATCCAAGACATAGAATTGTTGAACATCAACATAAGATGTATTTAAATCCGAGTACTGGAACTTTATCTTCTAATTTAATATGTTGAACATTAACATAAGATGTATTTAAATCAAACAATAATTCCATCAATTACATTATTATTTTTTGTTGAACAATAACATAAGATGTATTTAAGCAGGAAACCCAAATCTTTGATTTGGCATGAGTCGCTTACTCCTTCGAGAATGGGAGAAGGAGTTTCATTAATGAGCATAGTATATATTTTATATATAATTAAATTTCCCCAAGCGAATTCAAATTTAAAACCTATTCTAGCCATTGATATATAAGGATTAGGATAGGTTTTTATTATGTATTTATGAAAAATAAGAATCGGTTGAGAAAATTTCTATAAAACCTTGTAAAATCAATGCGTATATGTTATTCTTGAAAATAAGGAATGGCTATTTTACTATG # Right flank : CATAGAACCCCAATCTGTGATTTAGGGTGAATCTCTTACTCATTGAGATATGGAGAATCAGTTTCATAAAACAAGTGAATCTGAGTAGATTTTTATTGACTAAAGTATTTTTGAAATTTAGTTTTAAGTTTAGGTTGTATTTTAGAGTGCTGTTGGAATTTTAAACCCCATTAAAAGAAGTTAAATATTTTTCTTTTAATGGGGGCTATATAAATTGCTAGATACTAATTATTTAAAAATTTATTTAATGAATCATTGTCTTTAAATAAGTTTTCTAAGTTCCCATATTTTTGTTCTAAATTTTTTCTATCATATTTATAGGATTCTTCTCCTATATTGGCTACATTAAATTTAATAATTTCAGCGTTTGGTATAAGAGATAATAATACCACTGAATTCTTTTCTAAAAGCTTGTTAGCTTTTTTGTCACTCCAAAATTTATTATAATTTTCTTCACCTAAATTTTCATTTGCTTTATAGTTAACAGTTATTTCATATGG # Questionable array : NO Score: 4.01 # Score Detail : 1:0, 2:3, 3:0, 4:0.60, 5:0, 6:0.25, 7:-1.53, 8:1, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACCTTAACATGAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [3-18] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [71.7-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.68,0 Confidence: HIGH] # Array family : NA // Array 4 202238-202794 **** Predicted by CRISPRDetect 2.4 *** >NZ_LHUL01000003.1 Clostridium botulinum strain ATCC 25763 contig_3, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 202238 30 100.0 35 .............................. TCGAATATTAAGCACGCACTACGCTTACCATCTTT 202303 30 100.0 36 .............................. ACGACTATTCCTCTTGAGGGAAGTAGGTATAAGCAT 202369 30 100.0 35 .............................. AAAACTTATACGCCCTAAAAGAACCATTACTTTAA 202434 30 100.0 35 .............................. GAGGTTCAAATCCTTTTATCTCCAAAGGAATTCCG 202499 30 100.0 36 .............................. TTGGTACAATTATAAAGAGTTGAAGATAAACTATGA 202565 30 100.0 37 .............................. TAAATTTTAATAATATTTCCTTTTGAATCTCTTATAG 202632 30 100.0 35 .............................. TAAGGTTACAGAAGCTAATGATAGAATGGAATTAA 202697 30 100.0 38 .............................. TAAATTAGGCTATGAAATAAAACAAACAGTGGGAGAGT 202765 30 90.0 0 .......................C.G...A | ========== ====== ====== ====== ============================== ====================================== ================== 9 30 98.9 36 ATTGAACATTAACATGAGATGTATTTAAAT # Left flank : TATTTACAAATTAAAATTATTTATGCAATGGGGGAAAAAATGATTTTAACCATTGATTGTTTTAGATATATGTATTTTTTGTCACAGTAAAAAAACTAGAATACCTGGTACAGAGGATATGGATAAAGAATATAGAAATCCATGGCATCATATAAAAGGAGCTGGTATTGGAACTATAATAGGTGCTGTAGTAGCATTATTATCTGGAGGAATGCTTCATTTCATATCAATAATATAGTATTTAAGCAGGGAACCCAAATCTTAGATTTGGTGTAAGTCGCTTACTCCTTGGAGAGTAGGATAAAGAGTTTCATAAATTGAATTTTTCCAGGCGTAACAAATTTTAAAACCTATTCTAGCTATTGGTATATAAGGCTTAGAATAGGCTTGTTTTATGTATTTATTAAAAAACGTAATCACTTGGAAAACTTTCTATAGAACCTTGTAAAATCAATGGCTATATGCTATTCTTAAAAATAAGGAATGGCTATTTTGCTATG # Right flank : AAAACAAATAACGATGAAAAGATAACAAATAATAATTAAGGTGGTTTTTCATTGACAAGGTTTTTCAACATTTTGAAATTGAAAAACTAACAGCAAATATTATACAGAAAACTATAGAGAATCAATTATAAGCAGTAAAATCTAATTTTATAGTTAGTTTTTTTATAGAATTTTATAGTTAAAAAATTAAACATATAAATATGTGTTTATTTTTTATATAAATTTGATATAATATAAATAAGAAAAGCTTAGTGTTGGAGCACTAAGCAATCCTTAGAACATTTATTTTGTTTTAGGGCTATTGGATGAATTTAATAATTAAATTTGAGAGATTAAAGCACTATTCTTGGTCGGATGGGTGCTTTTTCTCTTTGCCATTAAGTTCTATGTGAATACCAAGAAATTTAATCTTGATAACTAGTTTAGAAATAAAAAGATTATGTTTTAAAATTAATTTAACAATATAAATTACAACAAAACTTTTTATGGTTAATTCTAGC # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGAACATTAACATGAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.50,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA // Array 5 203707-204584 **** Predicted by CRISPRDetect 2.4 *** >NZ_LHUL01000003.1 Clostridium botulinum strain ATCC 25763 contig_3, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ===================================== ================== 203707 29 96.6 37 ............................T ATTTTATGGAGGTTATCAAAAGTGAGTTGGGAGGACG 203773 29 100.0 36 ............................. AGGTATAGAAAAAATAAAGAAAACAACAGAGGAAAG 203838 29 100.0 37 ............................. TTAAACAGTTTTTTAGCCTCTTTGACTGTGATTGTAG 203904 29 100.0 36 ............................. AAAAATTTTAAATATGATGATTCTTCATCTTGTATG 203969 29 100.0 37 ............................. GATATTTCTTTTATAGATTTAGAAAAAACTTTAGCTG 204035 29 100.0 37 ............................. TTGTCTATTAGATGTATGTATTAAGTGATACATATCG 204101 29 100.0 35 ............................. AAGTTAAAGTGACACAAAAAACCTGTGATGAGGGG 204165 29 100.0 37 ............................. TCCTTAGAAAGTTCACACACATAACTTGTATACCATA 204231 29 100.0 36 ............................. GAAAGAACTAGAGCTAGTATTTTATATGAATTATCA 204296 29 100.0 35 ............................. AGAATACAGTCATCTTAGAAGAAGAAGCTAATAAA 204360 29 100.0 37 ............................. ATAAATAAGTACTTGGGTTTATCTTCTTTTTTTGTAA 204426 29 100.0 36 ............................. TGATGTGGAAGAACTTTAATCCTTTGGACGAATTCA 204491 29 96.6 36 ............................T GAAGAAACTATAAAAACATTAAGCATTATAAAAGCG 204556 29 82.8 0 ..............G....AG......GT | ========== ====== ====== ====== ============================= ===================================== ================== 14 29 98.3 36 TTGAACAATAACATAAGATGTATTTAAAC # Left flank : ATAACTAGTTTAGAAATAAAAAGATTATGTTTTAAAATTAATTTAACAATATAAATTACAACAAAACTTTTTATGGTTAATTCTAGCATATCCAATACCACCCCCTATTTATAAGTGAAAGACTCACCAATATCCTAGGAGGATAAAATATTCAAAACCCCCGTAGCCATCCACTACGGAATTACTATCCTAACTTGGATATTATATCATAATTATCTATACTAAAAACAGAGGAATTAAATGGTAAATAACATTTTAGTTTAGAATACTACGTTTATTTTAGGATAAAAATAACAAATAATTATATAGAATACGCTAATATTTTTCCAACCAACTTTAGCTTACAAACCTATATTAGCTCTTGAAATATAAAGCTTAAGGTAGGCTTTTCTTATATATTTATAAAATATTATAATCGGTTGGAAAATTTTCTTTAAAACCTTGTAAAACCAATGTCTATGTGCTATTCTTAAAAATAAGGAATGGCTATTTTGCTATGG # Right flank : TAGAGGAACCAAATTTGTTATTTGACGTAAATTGCTCACTTTTTGGAGAGTATGGGAAGGTGTTTCATTAATTGAATTTTTCCAGGCACAATAAATTTTAAAACCTATTTTAGTTATTGAGATATAAAGCGTAGGATAGGTTTTTACTATGTATTTATGTAAAACCAAAATCGCTTGGAAAACTTTCTTTAAAACCTTGTAAAATCAGTGTTTATATGATATTCTTGAAATTAAGAAATGGCTATTTTACTATGGTTGAACAGTAACATGAGATGTATTTAAATTGTTTCGGAGATTGGCTTCTATAAAACTTATCTACGTTGAACAGTAACATGAGATGTATTTAAATGGGATTTCCTCATTAAAACATCTTCATTTGGAAGGTGTTGAACAGTAACATGAGATGTATTTAAATTTGCCTAGATTATTTAACATTGTGCTTGAAGAAAATTGTTGAACAATAACATGAGATGTATTTAAATGTGGTAGTAAGTACATTA # Questionable array : NO Score: 6.17 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TTGAACAATAACATAAGATGTATTTAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:79.31%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [1-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA // Array 6 204838-205129 **** Predicted by CRISPRDetect 2.4 *** >NZ_LHUL01000003.1 Clostridium botulinum strain ATCC 25763 contig_3, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 204838 30 100.0 35 .............................. TGTTTCGGAGATTGGCTTCTATAAAACTTATCTAC 204903 30 100.0 36 .............................. GGGATTTCCTCATTAAAACATCTTCATTTGGAAGGT 204969 30 100.0 37 .............................. TTGCCTAGATTATTTAACATTGTGCTTGAAGAAAATT 205036 30 96.7 35 ........A..................... GTGGTAGTAAGTACATTACTCTTTGAGAAAAAATC 205101 29 90.0 0 ........T......A.......-...... | ========== ====== ====== ====== ============================== ===================================== ================== 5 30 97.3 36 GTTGAACAGTAACATGAGATGTATTTAAAT # Left flank : CTTAGAAGAAGAAGCTAATAAATTGAACAATAACATAAGATGTATTTAAACATAAATAAGTACTTGGGTTTATCTTCTTTTTTTGTAATTGAACAATAACATAAGATGTATTTAAACTGATGTGGAAGAACTTTAATCCTTTGGACGAATTCATTGAACAATAACATAAGATGTATTTAAATGAAGAAACTATAAAAACATTAAGCATTATAAAAGCGTTGAACAATAACATGAGATAGATTTAAGTAGAGGAACCAAATTTGTTATTTGACGTAAATTGCTCACTTTTTGGAGAGTATGGGAAGGTGTTTCATTAATTGAATTTTTCCAGGCACAATAAATTTTAAAACCTATTTTAGTTATTGAGATATAAAGCGTAGGATAGGTTTTTACTATGTATTTATGTAAAACCAAAATCGCTTGGAAAACTTTCTTTAAAACCTTGTAAAATCAGTGTTTATATGATATTCTTGAAATTAAGAAATGGCTATTTTACTATG # Right flank : TTGGGATATGATTTTTACATTAATTAAATAATAATCGTAGTTTATTATAAATAGTATGGAGGTAGATTTTGAAACTTAAAGTAGTATTTTTAATTAGTTTTATTATGTTTATTCTTGGTATATACTTTTCCAATAAGTCTAATTTTATGATTTTAATTGGAATATTAGGTGGAGGAATAATGGGATGTGTATCAGCATTTGTAGGGTATTCTAGAACAAATGCTATTAAAGATAAAGAGGCTAGTTCATAAAAGAATTAATTTTTTATTATCTCATGGATTAAGTATGTGTTAAAGTTTTCAATATTAACATAAGAATTAAAAATTAATATTATATATGATAAAAATTACTAGAAGTCTTAGAAAAATCTAAGGCTTTTATTTTATGCAAAGATTTAGAATGGAATATGATAGGTAATTAATTTATTAATAAAAATAATAATATTTTTAAAATATAAGTAAAATAATTAGTTATATTAACTAAAAGGTGTATGGTATAAT # Questionable array : NO Score: 5.92 # Score Detail : 1:0, 2:3, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACAGTAACATGAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA // Array 7 215881-216375 **** Predicted by CRISPRDetect 2.4 *** >NZ_LHUL01000003.1 Clostridium botulinum strain ATCC 25763 contig_3, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 215881 30 100.0 36 .............................. TCATATAAATATTCTCTTTTTAAATCTGTACTAAGT 215947 30 100.0 34 .............................. CTCTTTCACCTATTGGTGTTTGACCATTTTTCTT 216011 30 100.0 37 .............................. AAAGTATTTTTAACTGTATTACCTAAAATGTTATTTA 216078 30 100.0 36 .............................. CAATATTTGCATTTACATTTTTTACATTCTTCTTTA 216144 30 100.0 36 .............................. TCCTCAAATAAGAAAGTGGTACCAAGGCTTTAATAT 216210 30 100.0 34 .............................. TATTTTTCTTTAAAAGATTTATGCATTATTCTAT 216274 30 96.7 38 A............................. TCTATAGAAGAACCAGCAGATTTGGCAATAGGTGTTAA 216342 30 90.0 0 ......T........G......G....... | G,AG,T [216361,216367,216371] ========== ====== ====== ====== ============================== ====================================== ================== 8 30 98.3 36 GTTGAACAGTAACATAAGATGTATTTAAAT # Left flank : TATTTTGAATTTATTATTGTTGACTAAAGGAATAGTAAATTATTTCAACAGAGCAACAGGATAATCTTTTTAACAAATACCTATACAAAGTATTGTTCTATGGAAATGCATATGAAAACTATTATTGCATAATTTGGTGGGGAAGAAAATAATTATAAATTGATAGAAGAAAGAGAAGCAATGTATCAATTAGAAACCTTAAAGAGGGATAAATATTACATGAAGTTAACAGATGATATTTAAAAAAGTTCTTGTTTAGGTATATAAGCAATTTTCACTTTAAGCATAATAAGCTCTACTTGTTTTTTAAATATTAATTTGAATTTTTCCAAGTGAATTTAATTTTAAAATCTATTCTAGCTATTGACATTGAAGGCTTATAGTAGGTTTTTATTATGAATTTTTAAAAAACAAAATCACTTGGAAAACTTTCTTTAAAACCTTGTAAAATCAATGCCTATATGCTATTCTTAAAATTAAGGAATGGCTATTTTCCTATG # Right flank : TATTGTAGACACAGAAAGCTGATCACATTACAGTATAAATAAAAGAAGGATGTGTTAGAAATGGTAAGAGGTCAAAAACAATATACGGAGGAATTAGAAAATAAATAATACAAAAATTAAATGTTTAATAGTTTTTATTCTATGGAAAGAGATGGATTCTATAAAAAGATAGATTGTATGTTTTTAGGATTAGAGAATTAAGTGAAGAATTTATATAAATTAAATGATCAAATTTCTTTTCATACAAGAAAAGCTTTAACCTATTTGAAATTTATAAGTTATGAGGGGGTTTAATATGACATTACCTAAAATAACCCAAGAGAATGTGAACATATTTATTCCACTTAAGGCATCAAAAATATCATATAGATTTGCTAAGGAACATCATATATCTCAAAAGCAAGCTTTATTGGAGTCCTATAATTCAAAAACCGATGAAGCTTTGGAAAGAGAATAAACTAAATTATGGTATGAAGGTATCAATTATTTATATGAAGAAT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACAGTAACATAAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA // Array 8 217144-217962 **** Predicted by CRISPRDetect 2.4 *** >NZ_LHUL01000003.1 Clostridium botulinum strain ATCC 25763 contig_3, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 217144 30 100.0 36 .............................. GCCAATTGTGAAGCTGTATCCTCTTTGAATTTATTA 217210 30 100.0 36 .............................. CAAGCTAATTTTTGCAAACATTCTTTACAAATTGGA 217276 30 100.0 34 .............................. AGTCGTGCCAGTTCCTTAGAAACTTTGTTTTGAC 217340 30 100.0 36 .............................. GTAAAACCAACCCCAACACCTTGGGCCATGTATTTA 217406 30 100.0 36 .............................. CGATTTTTTGTTTTTATGCCAAAAATTCAGTGGAAT 217472 30 100.0 36 .............................. TTAAGATTTACTTTGTTTCTTCTATTAACGAAAACT 217538 30 100.0 35 .............................. TAAAATTTTTCTTCTTGATTAATCTTTTCTCCATC 217603 30 100.0 36 .............................. CCTTTAGTCACCTTTGGAATTATGTTGTTAGCAAAC 217669 30 100.0 37 .............................. TTGTTTATTGTTGAGTATCCGGTGCTAGTTTGCTTAG 217736 30 100.0 36 .............................. AACAATATCAAATATCTATATTTTAAAATATCCCAC 217802 30 100.0 36 .............................. CCAACTATTATTACCTCTTTAACTTGTAATCTTTTT 217868 30 93.3 35 ...............AG............. TCTACTTTTCCTTTAAACCCTAAATCTAAAGTACC 217933 30 96.7 0 .............................C | ========== ====== ====== ====== ============================== ===================================== ================== 13 30 99.2 36 ATTGAACATTAACATGAGATGTATTTAAAT # Left flank : ATTTATAAGTTATGAGGGGGTTTAATATGACATTACCTAAAATAACCCAAGAGAATGTGAACATATTTATTCCACTTAAGGCATCAAAAATATCATATAGATTTGCTAAGGAACATCATATATCTCAAAAGCAAGCTTTATTGGAGTCCTATAATTCAAAAACCGATGAAGCTTTGGAAAGAGAATAAACTAAATTATGGTATGAAGGTATCAATTATTTATATGAAGAATTAGAAGAAGAGAAAGATTTAAAAAAGTAACGAAATTTTTTACACCTAAATCTATCATATTTAATATACTACACCTAATTATGCGTAAAATATTTTTCCAACCAATTTCAATTTTAAAACCTATCTTAGGCATTGAAATATAAGGCTTAAGATAGATTTTTGTTATGTATTTATGAAAAGTGGGAAACGGCTGGAAAATTTTCTGCAAAACCTTGTAAAATCAATAGGTATATGATATTCTTTAAAATAAGGAATGGCTATTTTGCTATG # Right flank : CTTAAATGAGTATGAAAAATTAAGTATAATTTAACCACAACATATGATGTAAAATCATTATAAAGATTATAATCTTTATAATGATTTTTTAATATTAAAAAAAATAATATATAATATTATAATCATATGGAGAATGTTGATTAAATATAAATAATGTGGTAATATAGAATAAAAATTTAGAATATTGTTAATATTCAATAAAAATACAATTGAAGACTGGAGGTGAAATAATGGAAGTATATGAATTAACACTAAAAATATTTCTCCTCAAAGATTTAACAGTGGACAAGTCTTATGAAAAATTAACAGAATTAATTGACAAATCTTTATGTAAAGATGATGAATTATTAGCTTTACATAATGAAAATAAGTATAAATACTATACTTTTTCATTACCTTATAAATTGGAAAAAGACAAAGTATATAAAGCTGGAAATATATATTCAGTAAAAATAAGAACTATTGATGAGAAAATATTAAAGAATTTCAAAACTCAGCTA # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGAACATTAACATGAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.50,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-81.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA // Array 9 227500-227924 **** Predicted by CRISPRDetect 2.4 *** >NZ_LHUL01000003.1 Clostridium botulinum strain ATCC 25763 contig_3, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 227500 30 100.0 36 .............................. ATCTTCTTATAATTGAAATATTCTTATCTGCCATTT 227566 30 100.0 37 .............................. TAAATTACAACCCCGTCAGTTTCATTTAAAGGGTTAC 227633 30 100.0 36 .............................. AATTAAGAAAAAATAATATAGTTGCCAGGGAGTTAT 227699 30 100.0 35 .............................. ACGTGATGCAGATGCATATGAGATAGCATTAGCAG 227764 30 100.0 36 .............................. TCTTTAATTAAGTCAAACCCATTATTTAAATCATAA 227830 30 100.0 35 .............................. TATAGTTCATAAATATTATTTGTATCATATGTATC 227895 30 83.3 0 A.....C.T...................GC | ========== ====== ====== ====== ============================== ===================================== ================== 7 30 97.6 36 GTTGAATAGTAACATGAGATGTATTTAAAT # Left flank : TAAAGGAGAAGATGTAGATGGGAAAAGGATTTAATTATAATTATGCTTTTGTTTTTTATGATGTTAATGAAAAAAGAGTAAACAGAGTATTTAAAGTTTGCAAAAAATATTTATCTCATTTCCAAAAATCTGTATTTAGAGGAGAAATAACACCAGCAAACTTAATATTATTAAAAAGGGACTTAAATAAAGAAATAGATGAATGTGAAGATTTTATATGTATTATAAAGCTAATGAATAATAATGTATACGGAGAAGAAATATTAGGGAATAAAGCAATGACAACAGGAGAAGATTTAATATTATAAAAAAATGGAATCAATTTTTCCAACCAATTTTAATTTTAAAACCTATCTTAGGCATTAAAATATAAGGCTTAAGATAGGTTTTTATTATGACTTTATGAAAAGTGGGAATTGCCTGGAAAATTTTCTGTAAAAGCTTGTAAAATCAATACTTCTATGGTATTCTTGGTTTTAAGGAATGGCTATTTCCCTATG # Right flank : CAGAGAACCCAAATCTGTGATTTGGCGTGAATCGCTTACTCCTTAGAGGCAACGAGAAGGAGTTTCATAAATTGAATTTTTCCAGGCGTAACAAATTTACAAACTTATTCTAGCCATTGATATATAAGGCTTAGGATAGGTTTTTGTTTTATATTTATAAAAAAGTAAAATCACTTGGAAAACTTTCTTTAAAACCTTGTAAAATCAAAGGCTATATGCTATTCTTAAAATTAAGGAATGGCTATTTTACTATGGTTGAACAGTAACATAAGATGTATTTAAATTTTTTTATAAGTTGTGGTGGTACATTAAAAGCTATAGTTGAACAGTAACATAAGATGTATTTAAATATGATTATCACTAAGGAGAGTGAAAAATGAAAGTTGGTTGAACAGTAACATAAGATGTATTTAAATTTGTCAGTAATATATACAGTCTTGTCCCATGCAGGGTTGAACAGTAACATAAGATGTATTTAAATGTAATAATATATTTTTTTA # Questionable array : NO Score: 6.14 # Score Detail : 1:0, 2:3, 3:0, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAATAGTAACATGAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [66.7-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.68,0 Confidence: HIGH] # Array family : NA // Array 10 228178-228925 **** Predicted by CRISPRDetect 2.4 *** >NZ_LHUL01000003.1 Clostridium botulinum strain ATCC 25763 contig_3, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 228178 30 100.0 36 .............................. TTTTTTATAAGTTGTGGTGGTACATTAAAAGCTATA 228244 30 100.0 36 .............................. ATGATTATCACTAAGGAGAGTGAAAAATGAAAGTTG 228310 30 100.0 35 .............................. TTGTCAGTAATATATACAGTCTTGTCCCATGCAGG 228375 30 100.0 35 .............................. GTAATAATATATTTTTTTAATTTTAAAACTTCCTC 228440 30 100.0 35 .............................. GACAAAAGGGATAGATTAGAAGATTTATTAGATGA 228505 30 100.0 36 .............................. GATAAGGTTGTACAATATTTTAATAAAAGAGGGATT 228571 30 100.0 36 .............................. GGAATTTCATTTAATATAGCTGTGTTATGTACTATT 228637 30 100.0 34 .............................. TCATAAATAAATCGACCATCATTTATAATTTTCT 228701 30 100.0 36 .............................. TTATTACAATATTCAGGTATAACAACTGTAAAATTG 228767 30 100.0 34 .............................. TATTTTAAATATTAAATAAATAGAGGTGATTTTA 228831 30 100.0 35 .............................. GATGAAACCATAGTAGCTAATCATCCATGGGCCAC 228896 30 93.3 0 ............................GC | ========== ====== ====== ====== ============================== ==================================== ================== 12 30 99.4 35 GTTGAACAGTAACATAAGATGTATTTAAAT # Left flank : ATATAGTTGCCAGGGAGTTATGTTGAATAGTAACATGAGATGTATTTAAATACGTGATGCAGATGCATATGAGATAGCATTAGCAGGTTGAATAGTAACATGAGATGTATTTAAATTCTTTAATTAAGTCAAACCCATTATTTAAATCATAAGTTGAATAGTAACATGAGATGTATTTAAATTATAGTTCATAAATATTATTTGTATCATATGTATCATTGAACATTAACATGAGATGTATTTAAGCAGAGAACCCAAATCTGTGATTTGGCGTGAATCGCTTACTCCTTAGAGGCAACGAGAAGGAGTTTCATAAATTGAATTTTTCCAGGCGTAACAAATTTACAAACTTATTCTAGCCATTGATATATAAGGCTTAGGATAGGTTTTTGTTTTATATTTATAAAAAAGTAAAATCACTTGGAAAACTTTCTTTAAAACCTTGTAAAATCAAAGGCTATATGCTATTCTTAAAATTAAGGAATGGCTATTTTACTATG # Right flank : CAGAGAACTTAAATTTGTGATTTGGTGTGAGTTGCTTACTTCTTGGAGGAGAGGAGTAGAGTTTCATTAATTGAATTTTTCTAGGTACAATAAATTTGCAAACCTATTCTAGCCGTTGATATATAAGGCTTAGAATAGGTTTTTATCATGTGCTTATGAAAAAACAGAATCACTTGGAAAACTTTTTCTAAAACCTTGTAAAATCAATGGTTGTATGATATTCTTAAAAATAAGGAATAGCTATTTTGCTATGGTTGAACCTTAACATAGGATGTATTTAAATTCATCTGTTATATCTATACCTAGAATTTTTATAAAAGTTGAACCTTAACATAGGATGTATTTAAATTTGTGAATGTATAGGGAAAAATGACCAAATGTTAGTGTTGAACATTAACATAGGATGCATTTAAGCAGAGAACCCAAATCTATGATTTGGTGTGAATCGCTTACTCCTTAGAGAGTGGCATAAGGATTTTTATAAAACTAAACTATGCATT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACAGTAACATAAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [71.7-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.68,0 Confidence: HIGH] # Array family : NA // Array 11 229178-229340 **** Predicted by CRISPRDetect 2.4 *** >NZ_LHUL01000003.1 Clostridium botulinum strain ATCC 25763 contig_3, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== =================================== ================== 229178 31 100.0 35 ............................... CATCTGTTATATCTATACCTAGAATTTTTATAAAA 229244 31 100.0 35 ............................... TGTGAATGTATAGGGAAAAATGACCAAATGTTAGT 229310 31 83.9 0 .......A.............C......GCA | ========== ====== ====== ====== =============================== =================================== ================== 3 31 94.6 36 GTTGAACCTTAACATAGGATGTATTTAAATT # Left flank : TCGACCATCATTTATAATTTTCTGTTGAACAGTAACATAAGATGTATTTAAATTTATTACAATATTCAGGTATAACAACTGTAAAATTGGTTGAACAGTAACATAAGATGTATTTAAATTATTTTAAATATTAAATAAATAGAGGTGATTTTAGTTGAACAGTAACATAAGATGTATTTAAATGATGAAACCATAGTAGCTAATCATCCATGGGCCACGTTGAACAGTAACATAAGATGTATTTAAGCAGAGAACTTAAATTTGTGATTTGGTGTGAGTTGCTTACTTCTTGGAGGAGAGGAGTAGAGTTTCATTAATTGAATTTTTCTAGGTACAATAAATTTGCAAACCTATTCTAGCCGTTGATATATAAGGCTTAGAATAGGTTTTTATCATGTGCTTATGAAAAAACAGAATCACTTGGAAAACTTTTTCTAAAACCTTGTAAAATCAATGGTTGTATGATATTCTTAAAAATAAGGAATAGCTATTTTGCTATG # Right flank : AGAGAACCCAAATCTATGATTTGGTGTGAATCGCTTACTCCTTAGAGAGTGGCATAAGGATTTTTATAAAACTAAACTATGCATTGTGATAACTTCTATATAAATTATTAGATAAAGGGGGATTTTATGAAAAATAAAGTTACCAATAATTTAAATTTTGTTGCAGCAATATTGCTTGGAATTGTGGCTATGTTAAATTTTTTTCAGCATAAAACATTGCTAGGAATTACATATATCTGTTCAGCAATATGTTTTTGTACACTTGAATTTTCAAAAAAGAAAAATGCAAAGCATAGATAAATTTAATTTTAAAAACCTGTCTATTTTTAGGACAGGTTTTTAGTATCTAAAGGAAATAGATAGAATAGTTTTTTGTAGTCATGTAAATATTATATATTATTTTATATTTTTGAAGGATTATCCATAATTCTGTAGAAGAATATTTGTGTAGGAAATATATTATAAAAATATGGAGGGAGTATTGTGGATAAATTTCGTAA # Questionable array : NO Score: 5.09 # Score Detail : 1:0, 2:3, 3:0, 4:0.73, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACCTTAACATAGGATGTATTTAAATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:74.19%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.00,-1.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [73.3-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0 Confidence: HIGH] # Array family : NA //