Array 1 6390-8614 **** Predicted by CRISPRDetect 2.4 *** >NZ_WCGO01000044.1 Lactobacillus helveticus strain IMAU30056 Scaffold44, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 6390 29 100.0 32 ............................. CCTGACTGGCACCATTTTTTTATGCTGAGTAG 6451 29 100.0 32 ............................. AAAAATGCAACAAAAAAGACCAGGTTCATTGC 6512 29 96.6 32 ............................C ACCAATGTGTTCATCAGGAAGCCAGAATACTG 6573 29 100.0 32 ............................. GCGATTCTTTTCGACGCAACTACACAGAGGCC 6634 29 100.0 32 ............................. ATCAAACATTACTTAATCCCTCCCTTAACCTC 6695 29 96.6 32 ............................C TCAACCAGCACAACCAGCTACTGCATCAACTA 6756 29 100.0 32 ............................. TATTCAGCGGCCTTAGTGTCAGCTTTCTTAGC 6817 29 100.0 32 ............................. ATTTGTCAACGAGTTATGAAACAAGTTTAAAA 6878 29 100.0 32 ............................. CGGATGGCTTAATAAATTGAGTAAAGTCAACT 6939 29 100.0 32 ............................. CAGTCTGACGTAAATAGTGGACTAGACACTAA 7000 29 100.0 32 ............................. AGCTCGCCATTCTTCAACTTGATTAGCCATGT 7061 29 100.0 32 ............................. TTTTTAGCATTTTTGCAAATTCGTTATCGCTG 7122 29 96.6 32 ............................C GACACGGACACTACTGAAGGTGGTTTTGCTAA 7183 29 96.6 32 ............................C GTACGGGTGGGAAAGCGCCTTTGCTTGCTTGG 7244 29 100.0 32 ............................. ATGATGAAAAAAAGCGCCCTATATTTTTAACG 7305 29 96.6 32 ............................C ATCACAAGCGAAAACAATCTGCCACAATTCGA 7366 29 100.0 32 ............................. ATCACAAGCGAAAACAATCTGCCACAATTCGA 7427 29 100.0 32 ............................. CAGCATCGGGCGTAGGTGTCCATAAAATGTTA 7488 29 100.0 32 ............................. TCCAAAGTTACCTTTGATATTCCAATGAGTTT 7549 29 96.6 32 ............................C AGGATGGAGTAGGAATTTACACATTAATATTA 7610 29 100.0 32 ............................. TCTTCAGTTTGAAGCAGTTTTTGATAATTTTG 7671 29 100.0 32 ............................. AGCTTGTATAGGGCTTACATGGAAAGCAAGAA 7732 29 100.0 32 ............................. AGCTTGTATAGGGCTTACATGGAAAGCAAGAA 7793 29 96.6 32 ............................C GACCTTAGAACGGTTAGAACGGTTAATAATTC 7854 29 100.0 32 ............................. CGTGGCCAATGGTGATGCCAATAACCGACAAG 7915 29 100.0 32 ............................. GTTTAGCATTGAAGTGGCATAACTTACATTTT 7976 29 96.6 32 ............................C TACACTTGAAGTGCCTACGCTTGAAGCGTCCA 8037 29 96.6 32 ............................C CACTTACTCTTAATGCCAGACAGGGTTTCAAA 8098 29 96.6 32 ............................C TAGTGTGATGCCAGCAGCCATATGGTCTACTA 8159 29 96.6 32 ............................C CACACTAAAGCATTTTTTACTAAACATCATAT 8220 29 100.0 32 ............................. ATGCAAACGGGGGAGCATTATTTTTACCACCT 8281 29 100.0 32 ............................. CAACTATTAGGAGTTGCTGTGGGTACAGATGA 8342 29 100.0 32 ............................. CTAAGTAATTTACAGAAGTTGTTCTTCGTTGA 8403 29 96.6 32 ............................C GTTAGAAGAGCAACGGGCGTTTATTCGAATAA 8464 29 96.6 32 ............................C TGGTATAATTAGTTTGTAGGTAAATTCCTACA 8525 29 89.7 32 ...............A..........TT. CGCGCTCAATGTGTTCAAGTGCGTCATTGGCA 8586 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 37 29 98.5 32 GTATTCTCCACGTATGTGGAGGTGATCCT # Left flank : ATATATATCTAAAAGTAAATGTGAAAGATTTTATCAACTAATTAAAACTGATTATGAAATTCCAACGCATATTTCTAAAATTACGCAATTAACATCAGAGAAATTGAATCAAAGTGGTGTTGAATTATTTGATGCGCTTGAAGACTTAAAGAAGTTTTTAGCTGATAGATTAATAGTAGGTTATAATTTAAATTTTGATATTAATTTCCTGAATCGTGACTATCAAAAATATAATAATTCCCATATCTTGAATAATTTAAAGGATATATTGCCAATAATTAAGAATAAAAATAAGTTTATTGATAATTATAAATTAAATACAGTTCTTAAAAATTATGGTATAAAAAATGCTGAACCTCATAATGCTTTGTCAGATGCGTGTGCCACATTGGATTTAATTATTAAGTTGGTAGAGCAAGGCAGCTTTTAAAGATAATGAAAGTGATTAAAAATAGAGATTTAGTATTTTGAAAACGGCGATAGAATGGGATTTATTTACT # Right flank : TATTTTTGCTATAAAACTGCTGTAAAAATATTGTGTGGAAAATGAAATCTATTTTGATACTTGGTATAAATTTGCAAAATGTTTTGGAATACCTAAAGAGTGTCACTACTTACTAGAATTGATTGCATGAGGTAAGAACCATGAGTAGGCTAATACGCCGCAGATCTATCACAAAATCTATTAAGGCTGAAACAACCGCAAAATATAAAAGGGAATTAAAAAAGAAAATTTTGCCTGGATACGGTAAAAAAGGAGCTGGGGTTGTAAAAGATCCTAAAAGAAGTATACGAAATGCTATTTACAATAGGACAACTTTAGATACAAGAAAAATTAGCAAATCTAAAAAGAAAGATTCAACCGATGATAATAAGCTAGGTTGTGGGTGTGCTACAGCTCTAGTTTTCTTCGGTGCTTTTGTTGGTCAAATGATTGGTGGCAATGTAGGTGGAGTAATTGGTGTAGTTCTTATGCTTATAATTGCTATTTGGGGAATGATATAG # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTCTCCACGTATGTGGAGGTGATCCT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,9] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTATTCCCCACGTATGTGGGGGTGATCCT with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-9.40,-8.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-76.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 3680-2980 **** Predicted by CRISPRDetect 2.4 *** >NZ_WCGO01000048.1 Lactobacillus helveticus strain IMAU30056 Scaffold48, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 3679 29 100.0 32 ............................. GGGACGACGATCAGGAAGCCTATGTGCTTTGG 3618 29 96.6 32 ............................C GACTATGCAACTACGTTAGATGGTACGCTGGG 3557 29 96.6 32 ............................C TATCAAATCCACGCCGGGTTGTTTCTACTTTT 3496 29 100.0 32 ............................. GGGACGATGATCAAAATGCCTACGTGTTTTGG 3435 29 100.0 32 ............................. ACAAGTTGTGATCTTTAAGCCATTTCTTGCTT 3374 29 100.0 32 ............................. GATAAAAAGCGCTGTTATTACTTTGATACCGC 3313 29 96.6 32 ............................C TACGGTACAATCTCAACCTACACAATCACATG 3252 29 100.0 32 ............................. TTTCCATTGCATGACTAATTCCGACAGCCATT 3191 29 100.0 32 ............................. ATGGTTGAATATATCAGGGGCGAAAGTTTGTT 3130 29 100.0 32 ............................. GATGAATGGACAGAAGAAGAGGCAGACAAAAA 3069 29 100.0 32 ............................. ACCTTATATTGATTCAACCAGCGCAGATTATG 3008 29 93.1 0 ...........................TA | ========== ====== ====== ====== ============================= ================================ ================== 12 29 98.6 32 GTATTCTCCACGTATGTGGAGGTGATCCT # Left flank : CCACGTATGTGGAGGTGATCCCACTGACACGCCACGCCACATTGGTATTCAACTGGTATTCTCCACGTATGTGGAGGTGATCCTTGTAAGTGTTAACCATGTGAAGAGACAGCGTAGTATTCTCCACGTATGTGGAGGTGATCCTGCTACTACTGGTTCAACCTTAACAAGCGCAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGAACGATATTAACAGC # Right flank : AAAGCTTTCAAGTGCTATAAATAGTTCATATATGAAATAATATTTTACAAATTATGAGGAAATGAAAATGCAATTATCTAATAAGACTTTATCCTTATGGGGTAAGAAAAATGTTAATGATGACAATGAAAAAATGTGGTTACCATTAATTGCGCATTTAATTGATACAAAAAATGTGATCAATTGGCTATATAATCATTGGATCAATGATGGTCAAAGACATATTTTGCAACGGAATTTTGAAGATGAAGATATAGTTCAAAATTTAGTGAAGTTTTTGGGATATATACATGATATTGGAAAGGCAACACCTGCTTTTCAAATTAAACAGTCATATATCCATAATGAAGATTTAGATCAGAATTTAGTAGAAAAATTATTGCGAAATGGCTTTGATGGTCTAGATAATTCAAAAATTAAGAAAATTAATACAAGTAAGACGCCTCATGCATTAGCTGGAGAAGTTATTCTAGAAAACAACGGGTTAAATGAAAGTATAG # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTCTCCACGTATGTGGAGGTGATCCT # Alternate repeat : GTATTCTCCACGTATGTGGAGGTGATCCC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.72%AT] # Reference repeat match prediction: R [matched GTATTCCCCACGTATGTGGGGGTGATCCT with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-8.70,-9.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [78.3-18.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 4797-4035 **** Predicted by CRISPRDetect 2.4 *** >NZ_WCGO01000048.1 Lactobacillus helveticus strain IMAU30056 Scaffold48, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 4796 29 100.0 32 ............................. GACTGTACTGTTTCTAACCAAATTCAATTTGC 4735 29 96.6 32 ............................C TAGAATTCACCCATCCGCAATTACGATTGGTG 4674 29 100.0 32 ............................. GAAGGAGGCGCTGGCTCTCGTGTTTCTATGTC 4613 29 100.0 32 ............................. CAAACTGATTCATATTAACTGGTCTATTTACA 4552 29 100.0 32 ............................. GAATTGGGGAACGTCCAAATTGACACGGGTGG 4491 29 100.0 32 ............................. GATCACTTTACCAGTGTGGGCATGTACCTTAA 4430 29 100.0 32 ............................. TTTCCATTGCATGACTAATTCCGACAGCCATT 4369 29 96.6 32 ............................C TTAGTTGGTTCTTCTGTGGTAGCAGTTGCGCC 4308 29 100.0 32 ............................. AACGCTGAACCAGCTAATAAATAGGAGGAATC 4247 29 100.0 32 ............................. CCGAGATCAGCTTTCCTGGCTAATAACTTATT 4186 29 96.6 33 ............................C ACTGACACGCCACGCCACATTGGTATTCAACTG 4124 29 100.0 32 ............................. TGTAAGTGTTAACCATGTGAAGAGACAGCGTA 4063 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================= ================== 13 29 99.2 32 GTATTCTCCACGTATGTGGAGGTGATCCT # Left flank : GCTAGTTAAGTAGTGATATCCCTTTTTAGCATGATGATCAACTTGAGTTAAAGCAGCATCCCTTATAGATAGTAGCATTGTGCTTTAAGCGAATGATCTTAGGATTAGATGAGAAATAATTGCTCTTATTGAAAGCTGGAGCTTTCTTTTCTGTAGTAGAACTTTGAGACTGATTAGAGTTCTGTACTACTTGAGTATTTGATTGAGCACTGCTAACAGCATCGGCTTGAACGTGATTAGTAGAAACAATTCCTGCACCAAGCAAAACTGCCACGATAGCTGTGTTCCACTTTGTCTTTTTCAACATATATTTTCTCCTCCATAATTTTTGAAAATTCATTGGTTATTTTACTCGTGTTTTAGAAGTTTTTAAATTAGGAAGGAAGAATTTAAAATGAGTAGAAGATATAAATAAAAAAGAATAAAATAAATAGGATGAAACTGAATAAATTTTAGTTTTCATAAAATTGAAATGGCTCAATGATAAGGGATCTTTTAGT # Right flank : GCTACTACTGGTTCAACCTTAACAAGCGCAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGAACGATATTAACAGCGTATTCTCCACGTATGTGGAGGTGATCCTGGGACGACGATCAGGAAGCCTATGTGCTTTGGGTATTCTCCACGTATGTGGAGGTGATCCCGACTATGCAACTACGTTAGATGGTACGCTGGGGTATTCTCCACGTATGTGGAGGT # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTCTCCACGTATGTGGAGGTGATCCT # Alternate repeat : GTATTCTCCACGTATGTGGAGGTGATCCC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.72%AT] # Reference repeat match prediction: R [matched GTATTCCCCACGTATGTGGGGGTGATCCT with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-8.70,-9.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [1-1] Score: 0/0.41 # AT richness analysis in flanks prediction: R [28.3-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.14 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 11304-9362 **** Predicted by CRISPRDetect 2.4 *** >NZ_WCGO01000049.1 Lactobacillus helveticus strain IMAU30056 Scaffold49, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 11303 30 100.0 37 .............................. TTTGCTCAAACGGATTTTAAAAGCACTTGGCAGTCCC 11236 30 100.0 36 .............................. GAGTCAAGACAACACCAAAAGAATTTCAAAACAGCA 11170 30 100.0 35 .............................. GATACTTTGTAAGATGCTACCCACAAACATGATCC 11105 30 100.0 37 .............................. GTTTTATTAATCGGCTTTGGCTTAGGCTTCTCAACAG 11038 30 100.0 36 .............................. ATTTGGTCTATAAGGCATAAAAAGATGTGCTTGTGA 10972 30 100.0 36 .............................. AGAACCATTTTTATTATTTCCATTAAAAGAAGCTCC 10906 30 100.0 35 .............................. ATAAACATGTCATGGAAGCTTCCGTTTTGAATATT 10841 30 100.0 36 .............................. AATGGCGCACGAGCGTGAAATGATGAAAAATTTAGG 10775 30 100.0 36 .............................. TGTCTTAGTCATTCTTGGCATCTTCTTCTGATTGAG 10709 30 100.0 35 .............................. TTCATTCTCAATCGCCAAAGTGCCATGTTTTATAA 10644 30 100.0 36 .............................. GTATTCAAACACTAATAAGCGCAGGAACCGATCAGA 10578 30 100.0 35 .............................. AATTAAAAACGATGATTTAATGGTAGGATTGAGAC 10513 30 100.0 35 .............................. TTAAGACCTTGCAAGTGTATCGGCTCCTTTCCTAA 10448 30 100.0 36 .............................. TACCATTCAAGCACTTAAAAAGAGTGTTGAAATTTC 10382 30 100.0 37 .............................. TGTATCACGCTACGAAGATGTTAAGAAAAAAGATTTC 10315 30 100.0 36 .............................. TCAAAGCAGCAAGCACACAACATATTGTAACCGTTA 10249 30 96.7 34 A............................. TGAAGTCATTAAAACAGACGGAACAGAACCTTGA 10185 30 100.0 37 .............................. CACAGAATCAAATCTACGCCAGCCAGTAAGCCGATAA 10118 30 100.0 36 .............................. ATGAGTTTTACTCAAATGCAAGTTAAAAGTGCTTTT 10052 30 100.0 35 .............................. ATTATATAAAAAGACTTAAAAATATGTTTTTTTAG 9987 30 100.0 37 .............................. AGTGATTTAAGCTTGACTCAAGGTGATGATAAGGACG 9920 30 100.0 36 .............................. GTATTCCTGTGGTACTGATTTGGTAGTTCAGCCTAT 9854 30 100.0 36 .............................. ACTGCATGGGGGATTAAGTCAGCATTAATGGAGCTT 9788 30 100.0 36 .............................. CACGATGACAATGTCGACTCAATGGTTTATGCCGTT 9722 30 100.0 36 .............................. GCAAATCTACGTGTATATCTAAGACACCGCACAAAA 9656 30 100.0 35 .............................. CGGAATTATTAATATTCCATTGACCAATACAGGTA 9591 30 100.0 36 .............................. AAACTTGAATGATCTATAGTACCTCTTTTTGAGTGA 9525 30 90.0 38 ............T.............G..T TTTTGAAAGTTTAATCTAAAAGTTTTAGTAGTTGGTAG 9457 30 83.3 36 ..C.........TC....G..........T AAAGCCGAATTTTACACCAACTTTACTAAATATGCT 9391 30 76.7 0 .A......C...........G..AA...TT | ========== ====== ====== ====== ============================== ====================================== ================== 30 30 98.2 36 GTTTTTATTTAACTTAAGAGAAATGTAAAG # Left flank : CCTATGAGCCTTATGTTATGGGATGGTAATAGATATGTATGTGATTCTGGTTTACGATATCGTAATGGATAAACAAGGTGCTAAAGTAAGTAGACATGTTTTCAAAATATGTAAAAAGTATTTAACTCATGTTCAAAATTCAGTATTCGAAGGTGAACTAACCAAGTCCCAGCTTGAAAGCTTGAAGAATGAGTTGGATAGATGGATTCGACAGAACGTTGATTCAGTGATTATATTCAAAAATAGAAATAAAGATTGGCTTGATAAAGAATTTATGGGTCAGGATTTAACTGATTTAACGTCGGATATATTCTAAAGAAGAATCTGTCGATGTAAGATACGAAGAAAATCCTGGGAGATCGACAGATTTGCAAAATGCCGGTACAATGATATTTGTGCGATTTGTCTAATGATTTTAGTGATTTTTGGATGCGTTTTTGGTTAGGTCGACAGATAGGGCCGTTGAATCTATTGATACAGTAGGACTGGTAGTTGCAACT # Right flank : GTGTGATTAAAGTCAATTAAATATAAAACATAAAGATTTATATTTAATTTACGGGAAGGAAACTACGATCAAACATCCTACTAAAATCCTACCAATTAAACTGGTAAAATAGATAAGTAAGTATAGAGAACAATTTTTATAAAAGGGGAATAAAATGGCAGATAAAAAATTACTTCTAATCGATGGTAACTCTGTAGCTTTCAGAGCTTTTTACGCTCTTTATCGTCAACTAGAATCTTTCAAGAGTCCGGATGACCTGCACACTAATGCCATTTACGCTTTTAAGAACATGCTCGATGTCCTTTTAAAAGACGTTGATCCAACCCACGTATTGGTAGCTTTTGATGCAGGAAAAGTCACTTTTAGAACAAAAATGTATGGTGAATACAAAGGTGGACGTGCGAAAACTCCAGAAGAGTTGCTCGAACAAATGCCTTACATTCAAGAAATGCTGCATGACTTGGGTATTAAAACTTATGAATTGAAGAATTATGAAGCAG # Questionable array : NO Score: 3.17 # Score Detail : 1:0, 2:0, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTATTTAACTTAAGAGAAATGTAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [15-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [78.3-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.41 Confidence: LOW] # Array family : NA //