Array 1 6208-8097 **** Predicted by CRISPRDetect 2.4 *** >NZ_QRMM01000010.1 Bacteroides thetaiotaomicron strain AM09-21 AM09-21.Scaf10, whole genome shotgun sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 6208 47 85.1 29 ...C.T.....T.....T........T......T...C......... TATAAAATCAAAATAATGAAGATATCAGA A,A,G [6211,6214,6217] 6287 47 100.0 29 ............................................... CAAGAAGCCGATAAACTCGACATCAAACA 6363 47 100.0 30 ............................................... TCGGCTGCTTTGCATCCGGCGAACACCCTC 6440 47 100.0 29 ............................................... GAGTGATACCAAATGGCTGTAAGACAAGG 6516 47 100.0 30 ............................................... ATGAAAAGTCCCAAGACAATAGGCAAGGTT 6593 47 100.0 29 ............................................... CATTTTCCCGTATTGAGAGAATACGACTA 6669 47 100.0 29 ............................................... CTTTGGACGACAACGCAACAACTGGTGTA 6745 47 100.0 29 ............................................... GTTGCTCAAAAGTGGCTACGTGAAACCAA 6821 47 100.0 30 ............................................... ACGATAATGAAGCATTTATGGTGTTGAATA 6898 47 100.0 30 ............................................... TGGTCTCCGTTGGCGACCTTTGCGCCAACG 6975 47 100.0 30 ............................................... TTCGTTACTTCGAAGTACTCGATAAGATCG 7052 47 100.0 30 ............................................... GCAGAGATTGAGCGGCTAGACACCAATATA 7129 47 100.0 29 ............................................... AACTAAGACCCATATAGAAACATCCGTCG 7205 47 100.0 30 ............................................... GCGGTGGGCGGGTCGCATGGTTCAGATGCA 7282 47 100.0 30 ............................................... GAGGCTGCCGAGAAAGTCGAAGAGGCCGAA 7359 47 100.0 30 ............................................... TCCGGCCAAACAGATTCTTGCAGTAAGTAT 7436 47 100.0 29 ............................................... TTTACAGATGTCGTTAATCAACTCGATAA 7512 47 100.0 30 ............................................... GCAGGGCGCGGGAAAGTCAACGCTGATTCA 7589 47 100.0 30 ............................................... CGAGTATCAGCAGGCTTTCCACTTGCATCC 7666 47 100.0 30 ............................................... CAAATATACTAGTTAAATCAACGTCTGACC 7743 47 100.0 30 ............................................... CGGTATGAGTTGCGGACAGATAGCGTTGTA 7820 47 100.0 30 ............................................... CAATTATTTCACACTTCCGAGATTTTAGTA 7897 47 100.0 30 ............................................... AAGCGCAAAGAGTAATTGACGCAACTGATT 7974 47 100.0 30 ............................................... ACAACAAGCGGCAGATGCTGAATACAAAAG 8051 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ============================== ================== 25 47 99.4 30 GTTGTGATTTGCTTTCAATTTAGTATCTTTGAACCATTGGACACAAC # Left flank : GAGCAGATCATGCAAAGTGACAGCAGCCTGATTCAACAGACCGTAGGGACAGCTTTTGATATGTGGCAGAAATTCGCATTTACTATCGTACTGATTGCTTCCTTCATCTTACTTTATCAGAAGGCTAAGTTCCAGAAAACCGTTTCCAACCTGCGCTTTTACGGAAAAATGAGTCTGACTAACTACATCACACAATCTATTATGGGAGCTATCATCTACTTCCCATTCGGATTTTATCTGGCTCCCTATTGCGGATATACGCTCAGTCTGATTATCGGAATCATTCTGTTCCTATTACAGGTACAGTTCTGTAAATGGTGGCTGTCGAAGCATAAACAAGGACCATTGGAAACCATTTGGCATCGATGGACTTGGATAAAGATAAAGAAAGGGTAATAGACAAAGTATAATCTCACATCATTAGCAATTTAACATCATATGAACAAACTACAATACTTGAGGCAGCAGAAATAACAGGCAGAGAAATATAACTAAAATTT # Right flank : CTAATTATCACTTACACATTGTGAATCAACAATTTACAAAGAAGTTCAGAAAAGAAAAAAGAGAGTTGTTTCCATCAAAAAATCCCGCGTCAATGCGGGATTTTTATTTTAAAACAGTTCTAATTGCTGTCCTGGTGAATTCACATTTTGGATTTTCTTCCCATAAAAAAGCTCTATGTCCCCAAATTGTTTATCCGTAATACACATAATTCCAATCTGCCCAAATTCAGGGAGAAAAGATTTAACTCTTTTTATATGCACCATTGCATTCTCACTACTAGCGCAATGACGCACGTAAATAGAAAACTGAAACATCGTAAAACCATCCTTTTGCAAATTCTTTCTGAAATCCGCATAAGCCTTCTTATCTTTCTTTGTTTCAGTCGGCAAATCAAAAAGAACAAGCACCCACATGACTCGATATTCACTAAATCGATCCATTACCGTTCAGGATACGAAATTCGACGAACTTCCCCACTGAAACATTTATAAAGCGATGC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGATTTGCTTTCAATTTAGTATCTTTGAACCATTGGACACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:65.96%AT] # Reference repeat match prediction: F [matched GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAAACAGC with 98% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-1.30,-1.50] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [76.7-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [4.5,4.5 Confidence: NA] # Array family : II-C [Matched known repeat from this family], //