Array 1 25816-28000 **** Predicted by CRISPRDetect 2.4 *** >NZ_VNIL01000008.1 Thalassolituus sp. C2-1 Scaffold8, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 25816 28 100.0 32 ............................ ATCTGGTCCTTTTCGGCTTCCATCTTTTCTTT 25876 28 100.0 32 ............................ ATCTGGTCCTTTTCGGCTTCCATCTTTTCTTT 25936 28 100.0 32 ............................ TTCGTGTACAAGCAGATGGTTGATCAGGATGA 25996 28 100.0 32 ............................ TTAATCCGCAAACCGTCTTTAGAGTAAAACAA 26056 28 100.0 32 ............................ ATCGTGGACCGGATGCGTGCAGGGCATGTGCA 26116 28 100.0 32 ............................ TGCAGGTGGCTGAGTATCCACGATTCATCCAG 26176 28 100.0 32 ............................ TGTGAGGCACATCAAACGGTCAAGAACTTCCT 26236 28 100.0 32 ............................ GTCCGGCGGGCACAGGCCACAACACTATGACG 26296 28 100.0 32 ............................ ACAACGGCGCGCTCCTTCCATGCAAGCCTGTC 26356 28 100.0 32 ............................ ACCCGTCTGACCCTATATACAGTAATAGTGCC 26416 28 100.0 32 ............................ ACTCGGGGTCGAATATCTGGCCGCCCAGAGCG 26476 28 100.0 32 ............................ TGCGTTACCTGCTGTGGCTGATCCTCTCTGAA 26536 28 100.0 32 ............................ TGAGCGCTCTGGCTTGTTCTTCCAGATCCATT 26596 28 100.0 32 ............................ TAAGCCTAACTATGACATTGGCCGAAAATTGA 26656 28 100.0 32 ............................ TTCTGCACCATTTCGGTGATCTTGTTCAGCAG 26716 28 100.0 32 ............................ TTTTGCCGGTGCTAAACCGTTCAATTTCCAGC 26776 28 100.0 32 ............................ CAGCGTATGCACGAATACCGAAGAACTTCCGC 26836 28 100.0 32 ............................ GGATAACCGTCGCAGCGCGACATCATAAACAG 26896 28 96.4 32 .............C.............. ATCTGAAATTTTCACGATCGTCATAAGTAGCT 26956 28 96.4 32 .............C.............. TTCCGAGACCTTAAAAAACAGGCTCATGCCAC 27016 28 96.4 32 .............C.............. TGCTCTTTCCCTTGCGGGGTTATGGGGACAAT 27076 28 96.4 32 .............C.............. TTGCCGACCTTGCCGCCAGCATCCAGCAGCTG 27136 28 96.4 32 .............C.............. AGAAACACCACGAACATATTTAACAAACCAAA 27196 28 96.4 32 .........T.................. AATCACATTCAGATCAGAAACCGTTGGTTTAT 27256 28 96.4 32 ......A..................... AATCACATTCAGATCAGAAACCGTTGGTTTAT 27316 28 96.4 32 ......A..................... AATCACATTCAGATCAGAAACCGTTGGTTTAT 27376 28 100.0 32 ............................ AGGCACGCACGCAGCACTTCATACACCGCGTT 27436 28 100.0 32 ............................ AGCATAAAAGCGCGGTACAGGTTACGGGCGTT 27496 28 100.0 32 ............................ AGCATAAAAGCGCGGTACAGGTTACGGGCGTT 27556 28 100.0 32 ............................ AGCATAAAAGCGCGGTACAGGTTACGGGCGTT 27616 28 100.0 32 ............................ AGCATAAAAGCGCGGTACAGGTTACGGGCGTT 27676 28 100.0 32 ............................ AGCATAAAAGCGCGGTACAGGTTACGGGCGTT 27736 28 100.0 32 ............................ CGGATGAAAGAGGCGCAGGAGTGCCTGATGTT 27796 27 92.9 32 .............C....-......... AGCTGGTAGACCTCTGGTTTAAGGCCCACGGC 27855 28 100.0 32 ............................ TATCCGGTGTCGAATCCGGCTTACGTTGATAA 27915 28 96.4 32 .............C.............. TTTACAGATTCGGCGTTTCTGGTACGTTAGGC 27975 26 82.1 0 ...........A.C......-.T.-... | ========== ====== ====== ====== ============================ ================================ ================== 37 28 98.4 32 GTTCGCTGCCGCATAGGCAGCTCAGAAA # Left flank : GCAGCCTGCTCAGCCTGATGCAGGAAGACTGGTTAAAAGGTATGCGCGACCATGTGCGCATGACCGCGATTCTCCCGGTACCAGACGATGCTGCTTACTGTGTATTCCGGCGTAAACAATTCAAAACCAGCGCCGAACGACTGCGCCGGCGGCGTATGAAGCGCAAAGGAGAAACGGCGGATCAGGCGGCCGAGGCCATTCCTGCCACCATAGAGCGTAAGCCCGATTTACCCTATGTGCATTTACGCAGCCACAGCACGGCTCAGCCGTTCTGTCTGTTTATTGCACGCGGGCCGCGACAGGAAAAACCCGGGCAGGGGGATTTTAACCGTTACGGGTTAAGCCAGCATGCAACGGTACCGTGGTTCTGACCCTTTTTCTTTGGGCTTTTAATTGGCTTTAAAAATCAAAGGGTTAACCCGTATCCCCAAAAAAAGGGGGATGCGGGCTTTCTCTGTAAAGTTCTTTAACAATCAGGGTGTTAGAAAGAATAAGCTCTA # Right flank : AGCCAAGGGGGGAGAACAAAAACGAAAAAACCCGCGAGTATTTGCATACGTCGCGGGCTTTAGAATTCGTGGTAGCTATGACTGGACTTGAACCAGTGACCCCAGCATTATGAATGCTGTGCTCTAACCAGCTGAGCTACATAGCCACATTGTTACCTGAAAGAAGTGGTTAATGCTTGCTGCATTGCTCCGTTCAAGTGGCGCGTATTATGCCAGCATTCTTTTGCCTGTCAAACATTTTTTTCTGATATTTTTCAAAGAGTTACTAAACCGTGCGAAACTCCGGGCAGAGGCCCTGTGCTGCTGCAGTCAGGGGTTGCTGTCGCGATTGTTGAGATGGCGCTGAATCGGGCTTTGTCTGAGTCTGAGGGCTTTTATATGTGCTCGGGCGCTTGATGTGTGCTCAGGCAGTACGGGCAGGTAGGTGTCAGATGCGAGGGAAGGCAAGCATTCAAGTGTCTGCCGCTTTGGCGCATAAAAGCTCCGGACATAAAAAAGCC # Questionable array : NO Score: 6.18 # Score Detail : 1:0, 2:3, 3:0, 4:0.92, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCGCTGCCGCATAGGCAGCTCAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCGCTGCCGCATAGGCAGCTCAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [61.7-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //