Array 1 1186804-1185815 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACBPE010000001.1 Enterobacter bugandensis strain IF2SW-F3 Enterobacter_cloacae, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 1186803 28 100.0 32 ............................ AGCATTGCCGGGACTCTCAGCGTCGAATCCAG 1186743 28 100.0 32 ............................ TAAGCCCTGGAAATCAATCTGTCCTCCTGTGT 1186683 28 100.0 32 ............................ TTTTTGCTCATTGGTTTTTCAGCCTCAGTCTG 1186623 28 100.0 32 ............................ GTGGGGCTCGAAGCTCTGGCTGCTCAGCCGTG 1186563 28 100.0 32 ............................ AGCCTGATGGCAGCGCCGCAGCATGAAGTGAT 1186503 28 100.0 32 ............................ ATATTGATACCATCCTCTGTGGTGGCGCTATT 1186443 28 100.0 32 ............................ AAGAGGCCAGCTTCGTGAATCTGGCTTACGTA 1186383 28 100.0 32 ............................ ATAACCCGAATGTGTGAGCGGAGCCCCTTTAC 1186323 28 100.0 32 ............................ ACGGAGTACAGGTCAGCAACGTCAGCTGACGG 1186263 28 96.4 32 ........T................... ATATTCTGCTAAATCAACCCCGGCTCAAACGT 1186203 28 100.0 32 ............................ ATGAAGTCATTTACACACATTCAGCAGAAGGT 1186143 28 100.0 32 ............................ TACGCGATTCATCGGGGTCAGGGAAATGACAA 1186083 28 100.0 32 ............................ GAAGGGCGTAATACTCCAGGCCAAAACGATAG 1186023 28 96.4 33 .G.......................... AGAGATTGAACAGCTGAGTGACAAGCGTCGATT 1185962 28 100.0 32 ............................ TACATCACAGGACAATCATCAAACTCACCAGA 1185902 28 89.3 31 ...........C...C......C..... ATAGAAAATAAGGCCTAACAGTCGTCGCACC C [1185877] 1185842 28 75.0 0 ........T..A....A....CCT...G | ========== ====== ====== ====== ============================ ================================= ================== 17 28 97.5 32 GTGCACTGCCGTACAGGCAGCTTAGAAA # Left flank : CGGGCTACGCGTTCGCTCTCATCCGGCGTCAGCGTCCGTCCCGCGCTTTTGCGGCGGGCCACGTTACGTTCATTAATCCCTGTAACGCGTAAAATGTCCGCTTTCGACATGGCCGTCCATTCATGAATATTGTCGAGCACGCTGACGGGCAATCCCTGGTTGAGAAATTCTATCAGCCGCATACCTCTGTTCGCGGGTAAACCGGCGTAGCGCCAAAGTGCGTTATCAGCAGGTTTCTTGGCGGGGATCCAGGTTCTCATGTTACCTCCTGATTAATGTCATTTGTCATGGTTAAGTATAGTCATTTGTCAGATGGAGTGGAATGGGGATTTTTTGTGCTGGGTGGTTTGTGAGAAGAACGATGTTTTGACCCTGATTTTTAACGGTTTTGTAATCCATTGATTTTAAATGAGTATTTTTGGTGGGTAAAAAAGAGGGTCAGAGAAGGTTTTTTAGCTTTTTTTGTATGCAAATCAGAAGGGTGTGGAGATATTATTTCA # Right flank : CTGGAACGAACGGCTAAATAATTGTTCAAATAATCAACAGCACCACTAAAAAATAAGGCCGGGATTAACCCGACCTTTTATATATTCATCTGCCATTACAGGCGAAAAAATTAGCGACTACGGAAGACAATGCGGCCTTTGCTCAGGTCGTACGGGGTCAGTTCAACAGTCACTTTGTCGCCCGTCAAAATGCGGATGTAGTTTTTGCGCATTTTTCCGGAGATGTGCGCAGTTACCACGTGACCGTTTTCCAGCTCTACGCGAAACATGGTATTAGGCAACGTATCAAGTACGGTACCCTGCATTTCAATATTGTCTTCTTTGGCCATCTAATCCTCTGGGGTATCACTACCAAGTTTTGAACCGGCAAGATAATGCCGAAATTCATCAATTAAGTAAAGAATTGCGCGATTAAAACGCAGCAAAACAGTTTCGGCGCATTGCCCAAGCGTCACGGTACAACCGAACAGGAAGCGCATTCGTAAAGGGGAGACGACAGG # Questionable array : NO Score: 6.14 # Score Detail : 1:0, 2:3, 3:0, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [12-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 1197287-1196357 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACBPE010000001.1 Enterobacter bugandensis strain IF2SW-F3 Enterobacter_cloacae, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 1197286 28 100.0 32 ............................ CTTAATTGTATAGGGGGAGCTATGAAAACGTT 1197226 28 100.0 32 ............................ TATAACTATCAATATACAAAATAAATGGTGCG 1197166 28 100.0 32 ............................ TAAAAAGATAAGAGCAATGTTCGTCGATGAGG 1197106 28 100.0 32 ............................ AGATACAACAATTATTTTAACAGATGATGGTA 1197046 28 100.0 32 ............................ AGGCTCAATGGTTCCCTGCATGCTATCACCAC 1196986 28 100.0 32 ............................ GTCAGACGCTCAATCGCAAGCTGCATTTTTGA 1196926 28 96.4 32 A........................... GAAGTATGGGTCACGTTTAACCCGTATTTCGC 1196866 28 100.0 32 ............................ TCTCGCACAAGGTCATTGAGTGGAGAGTGACC 1196806 28 100.0 32 ............................ CTCAAAATAAAAACCCTGGGCTAAATGCTCCC 1196746 28 100.0 33 ............................ CGCAGCGAAGCGAGGACTCAAAAAGCATTACGG 1196685 28 100.0 33 ............................ CAGCTCGCGCCTTCATGCGCTTACGCGCATTCC 1196624 28 100.0 32 ............................ AAAGCGACGCACCAAAACCGGCAGTAGTCACC 1196564 28 100.0 32 ............................ TGATCTGGTGTGTGCTGATAGTGTGTTTCACA 1196504 28 92.9 32 ............G.T............. GCCAGGAATGCGAGATTGCGGATATCAGTTGG 1196444 28 92.9 32 A...........G............... AGGACAGGCCCATATCACAGGATTTCTCTGTT 1196384 28 92.9 0 A......................T.... | ========== ====== ====== ====== ============================ ================================= ================== 16 28 98.4 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : TCCCCCAAACGCAGCCCGTATGCCGTTGCCTCGGGGCTTATCTGGAAGAAGTTAAAACCGGCCTCACGGAATCCATGCGTGATTTTCAAGTGGTGGAATTTGAGGACGAAGCGGAACAACCGCGACAAAAAGAGTGGCTGCTGGAAGATACCGAAACGAAATGTGACTACTGCCGGGCGTTGAATCATGTGCTGCTGGTGTCGCATTTTGACCGCGACATGCTGCCGCATCTTACAGGACTGCTCCATGACATTACGCATTCTATGGCCGCAGATGTTGTTGCGCCTCAACGTGAAGAAACGGTAATTCACATTATTTCCTAAGTGCAATCCAGGGCGTCGGGGGCGTTATTCTGACGCCATTGGTTTATACCCTTTTTTCTGATGCTTACGTAACATATTGATTTATATAGTGCGGATTTACGTTCCAGAAAAAAGGGTTTTAGGCGTAAAAGTTGATTATTTTATTTGCTAACAATAAGATGGCGTTGTTTCCTTTCA # Right flank : GCCCCTTTGGGCTTTAATGCCGTGGAAATGGCGTTACTATCTCACAGACAGTACAAGTAAACCCATCCCTCACAAATATTCACCTTGTCTATTTAAAAACGAAATACCATCATCCACACGCTATCCATTTTCAGATTAAATAAAAATCCCATTCAGGGGTTAATTATATTTCCGTGTATATATTATTTTTAAAAATAATACTTTAAAAAAATAATGTGTTTTTGTTTAGTTATCACAGAAATTTCCATTCATTTGATATATATCACATTTGTATTTCTCTCATCTCCGATAACATACCCGCATTCAATACCTTGAAATTAAAGCCGTTGCTATGCCTGCAAACAGCGTTACCCCAACAGATTTAAAAACCATCCTGCATTCAAAACGCGCCAACATTTATTACCTGGAGAAATGCCGCATCCAGGTAAATGGTGGGCGTGTTGAATATGTCACCCAGGAAGGAAAAGAGTCTTTTTACTGGAATATTCCCATCGCGAATA # Questionable array : NO Score: 6.18 # Score Detail : 1:0, 2:3, 3:0, 4:0.92, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [53.3-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //