Array 1 45751-46641 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_CAAHYV010000005.1 Streptococcus pyogenes strain 31013V3S1, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                 	Spacer_Sequence                     	Insertion/Deletion
==========	======	======	======	================================	====================================	==================
     45751	    32	 100.0	    35	................................	TGACATCTATAATCCCTAGCTTTCCTTTGATACGA 	
     45818	    32	 100.0	    35	................................	CAGATATTAAACCATTCTTACCACCACCACGTCCC 	
     45885	    32	 100.0	    33	................................	TGTATCAACGCAGCCGACAAATACACATTTTAA   	
     45950	    32	 100.0	    34	................................	AATCTCATAAACAGGGGTATTTGATTTGAGGGTC  	
     46016	    32	 100.0	    34	................................	GATATGATACAGACGTCTGTCCTTGTCATTCAAT  	
     46082	    32	 100.0	    34	................................	AAGACGTGTATAAATTACACACAATCAATACTAA  	
     46148	    32	 100.0	    34	................................	AAGTCATCACGTAAATTTTGCAACGCTTCATCTG  	
     46214	    32	 100.0	    33	................................	CATCTAAAGCATCTGATCGGTTTTTAAGCTCAT   	
     46279	    32	 100.0	    33	................................	TGTATAAATTGCGAAAAGAAAAAGGAATTTCAC   	
     46344	    32	 100.0	    34	................................	ATTTAGTCGCCAACTTTAACTATGATCAAACTTG  	
     46410	    32	 100.0	    36	................................	TCTGAAGTTAAGACCTTGTCCAGAAGCCAAACCAAG	
     46478	    32	 100.0	    33	................................	GTCGATAATGGCTTGATGATCACCTGAGAAAGT   	
     46543	    32	 100.0	    35	................................	TCCATTTTTTACTTTCTCATGTGGCAAAACATAAT 	
     46610	    32	  96.9	     0	...............................G	|                                   	
==========	======	======	======	================================	====================================	==================
        14	    32	  99.8	    34	GTCTCACCCTTCATGGGTGAGTGGATTGAAAT	                                    	       

# Left flank :   AAGGCTATACGAGGAGATTTAGAAAGCTATCCACCTTTTATGGTTTAGGAGATGTTATATGATGGTTTTAGTCACTTATGATGTAAATACGGAAACACCTGCTGGTAGAAAAAGATTGCGTCATGTTGCCAAACTCTGTGTGGACTATGGGCAACGTGTTCAAAATTCTGTTTTTGAATGTTCTGTGACACCCGCAGAATTTGTGGATATAAAGCACCGCTTAACACAAATCATTGATGAGAAAACTGATAGTATTCGCTTTTATTTATTGGGGAAAAATTGGCAGAGGCGTGTGGAAACACTTGGTCGCTCAGACAGCTATGACCCAGATAAAGGTGTCTTATTATTGTAAAAATCTCTTGTGCGAAGCTAGCTTTCACAGAAACACCTTGCTTGCTCGCGCAAAAATAACTTAAAAAAGAAGCGAAATGGAGATAAAAAGGCTTAAAACACTTCTATGTGTGCCATCCGTTTCTCTATAAACTGTGTCATTTGGCGCA
# Right flank :  GATGAACCCGATCTCTCTTTTAATGAGGTCGGGTTTTTACATGCCTTTAGTCAACCATTTATCTGATAGCGTATCAAATTCAAGTTTTTGCATGTTCTAGTCTATGGTTTGCGCCACTAGCTTTCGGTAAACTAAGGGTAACTTAAGAGAGGAGTTATTTATGACACTATCACTTGTATTAATGGTATCGGTTTTTGGGGCAGGCTTGTTATCCTTTTTCTCTCCGTGTATCTTTCCGGTCCTTCCTGTCTATTTAGGCATTTTACTGGATGCAGATGATTCAAAGACGATTACTATATTTGGTAAAAAACTCTATTGGTATGGCATTGTCAAAACTTTAGCCTTTATTTTTGGTCTATCTACTATTTTTGTGATTTTAGGTTACGGGGCTGGTTTTTTAGGAAATATCCTTTATGCGGTATGGTTTCGGTACTTACTGGGAGCCTTGGTCATTATCTTGGGGATTCATCAGATGGGCCTCATTACCATTAAGAGCTTAC

# Questionable array : NO	 Score: 9.25
# 	Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTCTCACCCTTCATGGGTGAGTGGATTGAAAT
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         F Score: 4.5/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:53.12%AT]
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  F [-5.50,-4.70] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-1] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [58.3-61.7]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [5.28,0   Confidence: HIGH] 

# Array family : NA
//