Array 1 4922-2949 **** Predicted by CRISPRDetect 2.4 *** >NZ_RQYO01000019.1 Buchananella hordeovulneris strain OH1877 scaffold_18, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ===================================== ================== 4921 37 100.0 34 ..................................... GGCTTTCAGCGGGGCTTAGTCGTCCCAGTCGCCG 4850 37 100.0 34 ..................................... CACGCAAAAGGTAGTCGTCGTTCTTTTTCTTCGG 4779 37 100.0 32 ..................................... CAGGGCGGCCTGGTGATCGGCGTTCGTCCATG 4710 37 100.0 36 ..................................... CGCATCCAGCGCCGCAGCTACCACCAGCGCAGCCAC 4637 37 100.0 34 ..................................... CAGCCCCGGTAGGTCCAGGGCCTCAATGAATTCC 4566 37 100.0 34 ..................................... GGTCTGCGGCCTTCTTGAAGCTCTTTTTTTCTGG 4495 37 100.0 34 ..................................... CCGAAGCGGAATCAGTGGCTTCGTACTTTTGCTG 4424 37 100.0 35 ..................................... GGAGGATATCATTTCGCTGGTCTCTTACAATAAGG 4352 37 100.0 35 ..................................... TATACCCCGGATCTGTCCAGATCCGGGGCGTCAGC 4280 37 100.0 34 ..................................... GGGACGAGTTCATCCCGGAGCCAGTGGCACCGGG 4209 37 100.0 33 ..................................... GTTTCGCATAGTATGCGAACACGTACCCCCCTT 4139 37 100.0 34 ..................................... AAGCCAGCGGCTTCCGGCACGAGCTCTTCTCGAA 4068 37 100.0 35 ..................................... TTAGTGCTGAAGATCCACCGGTCCAATGAATCGGG 3996 37 100.0 35 ..................................... GAGATACGAGAGAAGCTTGGGGCGGGTGCAGCCTG 3924 37 100.0 34 ..................................... CAGCCCCTCGCAGTGTGCGAGGGCTTTGACTACC 3853 37 100.0 34 ..................................... AAGCCACTCGCATGCAGCGATGGCCTCAAATACC 3782 37 100.0 36 ..................................... GGCTGCAATTCCTGCTCCAGTCCCTCGCACACGGCG 3709 37 100.0 36 ..................................... ATGAACACCACCCCCTCAGTCGGCTCGGGCAGGCCC 3636 37 100.0 34 ..................................... ATAGTCGGACTCGGCGTCGGGTCCGGGGCTGGGG 3565 37 100.0 36 ..................................... GTGCCGTCGGGCGCCGCCAAGGCTACGGGTTCACCG 3492 37 100.0 37 ..................................... GCCTGGAGGGCGGCGCGGTGGTCGGCGTCCGTGTAGG 3418 37 100.0 36 ..................................... CCGCGCTGACTACCCTCCTTCTGAACCTCCTTCAGA 3345 37 100.0 34 ..................................... ATACTGCCCGACGCAGTATGTACGGTGTAGCGAT 3274 37 100.0 36 ..................................... GGGTGATGGGCAGCCTCTCTCCTAGGACGATGTCAC 3201 37 100.0 35 ..................................... CAGCCACCAGTACCCGGGTGGCCGGATCTATAGCC 3129 37 100.0 34 ..................................... CGGTCCTGGCCAGCGAGAGACTCGTAATTCTCCC 3058 37 89.2 36 ...................T........A....G..T TTGGAGTTGGTGACCAGGCTGGGCTGAGAGTCGGAA 2985 37 70.3 0 T.T.G...A.C..........T....G.TTC..C... | ========== ====== ====== ====== ===================================== ===================================== ================== 28 37 98.6 35 GCCAACAAGCACCTCGCGACTAAAGGTGCATTAAGAC # Left flank : GGTGCGAAAATCCGCGAGTTAACTCGCGTATCCTGAAACAGATGCACCAAAGTGCTGGAATTGCGTAAGTTGGCTTCAGCAGCAACTTTGTTGCTGAAGCGGTCGGGGCGCTACCTGGCTGCTATGCCTAGGTCCAGCATAGGGGTAGGAGGGCGGTTGTGGTACTTGCTCCGGGCCGCAAGTGTGGCGTGCGTCACTGCAGACGGGTTTTTTGTTGGTTTCTCAACGAAAAGTAGAGGTGCGTGACTGTCACTCCGTGCATGTGTCAGGGCAATCGTGTGCATGCAAATGATGCTGCATGCGGGACAGAAAAAGGGCGGAATGATGTGGACTGACATCAACAGTGCGAACTGCTGTTCTTGTTCAGGTTATTGTCAGGATCGAGTTTGGGTGCGTGAACGTGACGAAAATCAGCGCACATCGTTCAGCTAAGTGCTAGCATGGGGGCGTTGGCGCGGTCCAGGCCGAGACGGCGGCCCTCAGTTGACTCTCAGCGCAGG # Right flank : CTGAGCTTCAAGGTTTCGTCTGGTCGGCCACCGGGCTGCCGCACCCAAGCCCGGCCACCGGGCCGCTGCACCTAGTACCGCGCCACCGCATCCCGCGCCGTCCGGCCCTCAGGCTTCCCCGTCGTGCACTCCCGGGGCGAGTGCGGCCCGGGCGGCGGCCGGGTTGGTGCGCCGCAGCCGTCGCAGGTAGCGCTGATACCACAGCGCCGCCGAGCCGACGAAGAGCACGAGCCCGCCAATGTTGTATGTCAAGGTCAGCCACAGCGGCTGGGTCAGGGGAATCGTCCCGGCGACGAACACGACGCAGCACCCGGCGAGCAGGGGGCCGATGACGGCGAGCGCCGCCCGGCGGGGCAGGAAGCGGAAGTTGCGGGGGACGGCGTCGTATTTCCACCGCAAGACCAGGTAGGCGTACATGATGATGAGGCTCGGCAGCAGCGCCGTCACCGCCGTCATGTTCACAACGATTCGCAGCAGTTCGTTGATGTTGCCGCTGCCGA # Questionable array : NO Score: 3.19 # Score Detail : 1:0, 2:0, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCCAACAAGCACCTCGCGACTAAAGGTGCATTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,13] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-9.70,-8.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [15-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [30.0-28.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.78 Confidence: MEDIUM] # Array family : NA // Array 1 22962-10091 **** Predicted by CRISPRDetect 2.4 *** >NZ_RQYO01000024.1 Buchananella hordeovulneris strain OH1877 scaffold_23, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ==================================== ================== 22961 29 100.0 33 ............................. GGGTCGTGGTCGCACGCTGATGGCGTTCGACAC 22899 29 100.0 33 ............................. CGGGACTTGACCTCGTCAATGGACGTGTCCCGG 22837 29 100.0 33 ............................. TTGGGGTTGTGGGGCTTGCCCTTGTGGCGTCCC 22775 29 100.0 33 ............................. GATTCGCCCGGCGTCTCGTGAGGAGGCCGACCG 22713 29 100.0 33 ............................. GGACCGCGCCATCTCGGCCACCGACCCGGTCCA 22651 29 100.0 33 ............................. AGTCTGGGGCACTACGAGCCCGAGCCGGGCGAC 22589 29 100.0 33 ............................. ATATACCCCGTTCCCGACCGCTGTCCGGCTGGA 22527 29 100.0 33 ............................. GCGCTAACTGGGAACGAGTAGCCAACAGCACTG 22465 29 100.0 33 ............................. CTCAGTCAGCGCCTTTTTGTACTCGGGCGCGGT 22403 29 100.0 33 ............................. TTCATCACGTCCAGCTCATGGGCGCGGATCAGC 22341 29 100.0 33 ............................. CGGTGGGGCCGCGCCCTGGAGCAGTCCGTCCTG 22279 29 100.0 33 ............................. TTTTCGGCGTTGAATTTCGCCAGCTTCTCCCAC 22217 29 100.0 33 ............................. ATGGCCATTGTCGCGACCTGGAAATAGATACCC 22155 29 100.0 33 ............................. GTAGCGCCAGGCCCCCGGGTTGTAGGGGTCCAG 22093 29 100.0 33 ............................. AATATCGGGACCGGGTGGGGTCGGTTTTCTGGG 22031 29 100.0 34 ............................. TCGGGCGGCTCCATAAGCATCCCCAGCAGTTTCG 21968 29 100.0 33 ............................. CGCCTGTATCGCGCGCCCCGAGGGATGACCCGG 21906 29 100.0 33 ............................. TCAGCTCCCACGGAGACGCTGGGCGGACTGCGT 21844 29 100.0 33 ............................. TTTTGTCCCCCTCAGGGTTCGTGGGAGTTTGGC 21782 29 100.0 33 ............................. AACACCCCAGAAAGGAGGGGAAAATGGACAAGG 21720 29 100.0 33 ............................. ACGTGTTGGGCCGGGCCATCCCCTGCCCTTCCC 21658 29 100.0 33 ............................. ACTGGACGAGTCGCAGCGATCGATGCTCGCCCC 21596 29 100.0 33 ............................. TGACTCCAGGGATCGACCCCGCGGCCTTCAGCC 21534 29 100.0 33 ............................. ACCACCGCGCTGGCCGACTGCAAGTCCTCGACG 21472 29 100.0 33 ............................. TCTGGACCACGTGCTGTGGGAGCGGCTCTGGAG 21410 29 100.0 33 ............................. TCCGCTCTCGTTTCCGATATTGTGATTAAGCAC 21348 29 100.0 33 ............................. TTCAAGGCCCACGGCTCGTCGGGCGCGTAGGCC 21286 29 100.0 33 ............................. GTAAGAGACGGACAGGATGTCGCGCAGCCACGG 21224 29 100.0 33 ............................. ACGTGTAGGGCGTGGGGGTCGTCCAGCTCGCCC 21162 29 100.0 33 ............................. CCGCCGATCTTCAGGGGGACCAGGCCCAGCGGG 21100 29 100.0 33 ............................. TTCCAGCGCGCCCTCGTCGCCCCGTACCGCGTC 21038 29 100.0 33 ............................. CTACACGGGATGAGGCTATTCAGCGGGAAATTG 20976 29 100.0 33 ............................. ACCTAGACCTACTGGCCTACGTCAAGCGTCTAG 20914 29 100.0 33 ............................. CCGAAGCCGAAGCACTGACCGCCCGCCGGGAGA 20852 29 100.0 33 ............................. CACACGACACCGTACGCAACGCCGAAGGGTTCG 20790 29 100.0 33 ............................. CACACGACACCGTACGCAACGCCGAAGGGTTCG 20728 29 100.0 33 ............................. GGGGCGCAGGTGATTTCACCTGGCGCTTCTTCC 20666 29 100.0 33 ............................. CCTGCCCGCTTCTTGTCGATAACAAGCAGTTCC 20604 29 100.0 33 ............................. CAGAGGCACTGGCCTACCTCCAATCTAGGCTTG 20542 29 100.0 33 ............................. GAGATGGCAGAGACGATGAGGTCCCAGGCGGCC 20480 29 100.0 33 ............................. CGCACCCGCACGCGCGCTGACGTCGAGGAGTCG 20418 29 100.0 33 ............................. CGCACCCGCACGCGCGCTGACGTCGAGGAGTCG 20356 29 100.0 33 ............................. CTTCATTACTATTATGACGGATGGTGGCCGGAC 20294 29 100.0 33 ............................. AACCGCCTAGAACTTTACTGGAAGCACGAGTTG 20232 29 100.0 33 ............................. TGTCCACCCTTAAATGGGTTTAGCGGTTCTGGC 20170 29 100.0 33 ............................. CGGCTAAGTAAATTAATTGATGGTGAGGCCATA 20108 29 100.0 33 ............................. TCCGTTCTGTCGCTATTGCGACGATTATAACTG 20046 29 100.0 33 ............................. TCGACTTGCCATATGCCCATGATGGACATATAG 19984 29 100.0 33 ............................. AGAAGAATACGTCCAGGACACTATCGCGCACGA 19922 29 100.0 33 ............................. GAGCCGGTCAAGGAGGCAGGGAAACTCACAGGG 19860 29 100.0 33 ............................. GACATAGCGGACCGACTCCCCTACTATAGATAC 19798 29 100.0 33 ............................. AAGCAGCGGAGCGGCGCCGAGTAACCGGGGTGC 19736 29 100.0 33 ............................. GGGCTTGCACTATACCCCACCCGGGGCACATAA 19674 29 100.0 33 ............................. TGGGGATACCCACTAGCCGAGGTCGAGAGGGCC 19612 29 100.0 33 ............................. CTGCACTGCCCGTTCTGCTCGCGTGGCGTCTTG 19550 29 100.0 33 ............................. GCCAGCACGACGCCGCGCGCGATCCGCATAACC 19488 29 100.0 33 ............................. CTACGCACTTCGGCCTGTGGAAGCCGACTGGCA 19426 29 100.0 33 ............................. GAGCTGAGCCGGGTCCGGCCGCCGCGGGCCCGG 19364 29 100.0 33 ............................. GAAGGTGGAAGCCTGAACCTGGGGCGGGTTGAG 19302 29 100.0 33 ............................. CCGAAATCCCCGGGCTCTCCCCCATCGAAGACA 19240 29 100.0 33 ............................. CATGGCACTAGTGGAAGTAGTGGCGTGGGTGGA 19178 29 100.0 33 ............................. AAACGGCGCGGCGCGTTATCCAAGCGCGCAAGG 19116 29 100.0 33 ............................. AAGGAGGTCACGGCCTACAACGTCAGCGGGACC 19054 29 100.0 33 ............................. GGCCAGGACATTGGAGGCGGTGCGACCGGCGGA 18992 29 100.0 33 ............................. TGAGGCGGAGGGCCGGGCCTAGCCATGCCGCAC 18930 29 100.0 33 ............................. ATCCGGTAGATGGGGACGATTATACGCTTGATA 18868 29 100.0 33 ............................. CCCGAACAGCACAAGGACGACATGGAACAGCTC 18806 29 100.0 33 ............................. GATGGGGCATTTATTCGCGAAGTTAACGGCCTT 18744 29 100.0 33 ............................. CCTTAATGGTATCGACCTTAACAAACATGGCTG 18682 29 100.0 33 ............................. TCCTGCTGGGTCTTGATGGCGGCCAGGGCGGCC 18620 29 100.0 33 ............................. CCCTACTCACGGGCCGCGACCCCGACGCGTTCG 18558 29 100.0 33 ............................. TTTGCACACTAACACTGTTTCCCAACAAAAACA 18496 29 96.6 33 ................A............ GCCAGCACCGCGTTGAACAGGGCGACGGCGGCC 18434 29 100.0 33 ............................. GTATTGAGTTGTTGCAGCGTGTCCTTGAATTTA 18372 29 100.0 33 ............................. ACATTTCGGACCACATGAACAAGAAGATTAAGG 18310 29 100.0 33 ............................. TTCCCGGCCCTGCTGATCGACGCCGCCATCCGG 18248 29 100.0 33 ............................. ATCGAGTTACGGTCCCACTTGCCCTCCCTCGAC 18186 29 100.0 33 ............................. CAGGACAGCGAGGTGTTCAACCTGACCGAAGGA 18124 29 100.0 33 ............................. TTCAATGACTTCATAAACGGGATACGCAGCATC 18062 29 100.0 33 ............................. TCGCGCCGGGCCGCCCGCAGCAGGCTATCGGTG 18000 29 100.0 33 ............................. TGATCCGTACATTGCCTCCCTGGCGTAGTGTGC 17938 29 100.0 33 ............................. GCTTTTCGACAGCTCCCCGAATGGCGGGTCGGA 17876 29 100.0 34 ............................. CAGCATGTCGGGGTCGAACAGGGCCACACGCCCA 17813 29 100.0 33 ............................. TACAACCCTAAGGGGGAGCCATGACCACCACCG 17751 29 100.0 33 ............................. GTTGCCGTGTCCCTGGCCCCTTTGGCGGGCACG 17689 29 100.0 33 ............................. CTGCCAGACTCTCTGGCCTACCTCCAATCCAAA 17627 29 100.0 33 ............................. GGTTTCCAGGCCGTCTGCTGAGCGTGTTGCTGC 17565 29 100.0 33 ............................. CCTCGCGCAGAGTCCTCCACCAGGCGCTCGAAC 17503 29 100.0 33 ............................. TGGGGATACCCACTAGCCGAGGTCGAGAGGGCC 17441 29 100.0 33 ............................. TCTGCGCGGCGGGCGGACAGTATGTCTGCCAGC 17379 29 100.0 33 ............................. GCATAATGGCGTGCCTATTTCTCATGCCACGTA 17317 29 100.0 33 ............................. ATTGATCGAAAGTAATCGCAGGTAGTTGCATTA 17255 29 100.0 33 ............................. CAGACTCTCTGGCCTACCTCCAAACCCGCCTTG 17193 29 100.0 33 ............................. CGTTACCTTTAGTAGTGGTCGCATTGTTTCCGG 17131 29 100.0 33 ............................. ACGCCCAGAATTGCTACGTACTCGCGACTTGCA 17069 29 100.0 33 ............................. CCTGGATCAGGCAATCTGGCGGCTCGAAGAATC 17007 29 100.0 33 ............................. ATCGTATTTCCTGCAATTGTTACGCGGCGAGTG 16945 29 100.0 33 ............................. TGAGTGAGGGTGTGATTTCGTCTTTGCAGACTA 16883 29 100.0 33 ............................. GCTAGGCGAATGGCGGAAATTGTGTCGGCATGG 16821 29 100.0 33 ............................. GCCGCCCCGGGCTAAACACTCGCCGCGTAACAA 16759 29 100.0 33 ............................. GGCGGTGCCTACCAGGGCGCCGACTACCAAGGA 16697 29 100.0 33 ............................. TCTGTGGATTTTGCTACCTCTTCCGCCCAGGCC 16635 29 100.0 33 ............................. GGACAGCCCGGCGCGGTCCATGGACACCAGCCA 16573 29 100.0 33 ............................. GCCAGCAGGTTTTCAGCGGGCTTTTGGATCAGG 16511 29 100.0 33 ............................. AACCCGCAGACCCCGTGCCCCGCCTGTAGTCGG 16449 29 100.0 33 ............................. AGGCCGGGTTACTTTTTCCCAGGACCGCATCAG 16387 29 100.0 33 ............................. CGGCGGATCGCGCTGGGCCTGACCCGCGAAGAG 16325 29 100.0 33 ............................. AGGTGGCGGGTGCGGTCGGTGTCGAGCCCGACC 16263 29 100.0 33 ............................. AGTTACCCCGTCCAGTACCCGCAGCGGCCGATC 16201 29 100.0 33 ............................. CTGTCTGGCGTCAGTGAGGCGTTCGGGGCGGTG 16139 29 100.0 33 ............................. GGCGAGAAGCCGCTTTCGGAGTTCGGCCTGAAC 16077 29 100.0 33 ............................. GCCGTCACCTGCGGGGCAGGTGGCCGCGCGTAG 16015 29 100.0 33 ............................. GAAAGACGCGACCGTCCGCGGCGCGCGGCGGCG 15953 29 100.0 33 ............................. GGGGCCTGCTCGTAGGGCTCGTAGGTCTGGATC 15891 29 100.0 33 ............................. ACGATATCTAGGGCGGAGGCCTGGATCTGGGCG 15829 29 100.0 33 ............................. GCCGGAACCACACGCATGCGCATAGTCAACGAC 15767 29 100.0 33 ............................. AACGGCTCCAAGCGAGTGGACTTCTACTCCGGT 15705 29 100.0 33 ............................. AACTGCGCCGCGCTGCCGGGGGCCTGGCGCAGC 15643 29 100.0 33 ............................. CAGACTCTCTGGCCTACCCCCAAACCCGCTTTG 15581 29 100.0 33 ............................. AACGAAATCATGCCATTACTGCGCGTACCCGGC 15519 29 100.0 33 ............................. CAAGGGTGGAAAGCGATATTTGGCAAAACTACA 15457 29 100.0 33 ............................. TCCATATGGGACGTTAACTGCCCAATTCCCGCA 15395 29 100.0 33 ............................. GGGGACGGGAAACGTTGCCAGTACGGCATCTTA 15333 29 100.0 33 ............................. AAAAGTCTCTCGCAGTTGCAATAGCATAGTGGC 15271 29 100.0 33 ............................. CCGCCGTGGTTAGGGCCAGTATGATAATCGATA 15209 29 100.0 33 ............................. CTCACGACGAGTTTATGCTTATGTGTAAGCTCT 15147 29 100.0 33 ............................. GTTGACCACCACAGGTGGCATGTGGGGGTAGGC 15085 29 100.0 33 ............................. TTGGCTTGGGCCTACGGCCACTTGGGAAGATCG 15023 29 100.0 33 ............................. CACAACTCGACGGAGTAGAGGTATTTTCTGGCC 14961 29 100.0 33 ............................. ACATCGTGTGGCGTGACACGATCGCCCGCGGAC 14899 29 100.0 33 ............................. CTGCACGTGTCCGAAGCCAAGGCGGCAGCCGGG 14837 29 100.0 34 ............................. CTGAATGATGCTGCGGATCAGCTCGAAGGCGGTC 14774 29 100.0 33 ............................. CCTGAAATGAACCTAGTTACCCGCGCCTTGGCG 14712 29 100.0 33 ............................. CACTGCTGCCACGTCATTGCCGCATCGCGTCCA 14650 29 100.0 33 ............................. TGAAACTAATCGAACGGGAATACTGTAACGAAA 14588 29 100.0 33 ............................. GAGAAGAAAGAAAGCTACCCGAAACCCAAGCCC 14526 29 100.0 33 ............................. GTGGCCCACGAACTGGCTTGCCACCCGGGCCAG 14464 29 100.0 33 ............................. TGAAGCCCGGTTAGCAGGCCGCCCATGATCGCC 14402 29 100.0 33 ............................. CGGACAGACACCCAAATAATCCTTCCCGGAGTA 14340 29 100.0 33 ............................. AATACATTCGCGACATGGTGGACATAGAACTAA 14278 29 100.0 33 ............................. TTGCGTTGCCAAGCTTTTCTGGCGCTCCAATCC 14216 29 100.0 33 ............................. CACGCTGATCCGGGATGACGACGAGGGATTCAC 14154 29 100.0 33 ............................. GCTGTCGCCAAGCTCACGCCCACTAGAAAAAAC 14092 29 100.0 34 ............................. CAGGTCCTGGCCGTTCAGGTCGGCCCAGCGGATG 14029 29 100.0 33 ............................. TGGGCGGGGGGTGCGGGGATCAGGGCGGCGACG 13967 29 100.0 33 ............................. GACCTGGGGTGCTACAGCTCGCTACCCGCGCGC 13905 29 100.0 33 ............................. TGCTTCGGAATCCCACACCCCGCAGAAGTACTC 13843 29 100.0 33 ............................. TTGGACGAACATTGCCTCGGGTAGCAGGGTTGC 13781 29 100.0 33 ............................. GCCTGGTTCGGCACCGACGCCCCCACCGCCTGG 13719 29 100.0 33 ............................. ATGTAGTTGACGGTCACGTGTGGGGGCAGGTTG 13657 29 100.0 33 ............................. TTGCTGTGGCTGCACCGGCAGGACGAGCCGCGG 13595 29 100.0 33 ............................. CTGGCCGTGCCGCGGACCTTGCGCAGCTTGGTC 13533 29 100.0 33 ............................. GAAGGTGTCCCTAGGGTCCTCATGTACGGGGAA 13471 29 100.0 36 ............................. CCGCTATCGACCAAGCGGTCGATCGTGCGGGGGGGG 13406 29 100.0 33 ............................. CTCCGGCGCGGGCCCCTGGTCGGCCGAGGCTGT 13344 29 100.0 33 ............................. ATAAGAAGTTCAACAACACAATGTCAAACCTGG 13282 29 100.0 33 ............................. TAGGAGGCCGTTGGGGATCTTCATAGCGTGGTC 13220 29 100.0 33 ............................. AAAAACCCATTGCCCCGCCTCGATCGGCTGGCA 13158 29 100.0 33 ............................. GGTGATGTCTCCCGTGCCGAGGCGTGCAAGGTC 13096 29 100.0 33 ............................. TCTATTGAGGATTTCTGCGCGACATCCTTCTTC 13034 29 100.0 33 ............................. CCGGTCGACTCCGTCCGGCCCGGCGACCTGTAC 12972 29 100.0 33 ............................. ACCCCCTCGACCTGCTGGGGCTCACGCGGCACC 12910 29 100.0 33 ............................. AATTCCGCGACGTCTCGCTCAGCGCGGGCACCC 12848 29 100.0 33 ............................. GACGGAGTCTTCGGCGGCCGCACGATCGGGGCC 12786 29 100.0 33 ............................. ACCTCCTCGAAGTAGCTCTCGGCGTCGAGGAAC 12724 29 100.0 33 ............................. ATATCAACGTCCATTGCGACGCCTCCCTCTTCG 12662 29 100.0 33 ............................. TCGTGCCGTCGCTGCGGGGCGCCGAGAAGGCGA 12600 29 100.0 33 ............................. TCAGGTTTGAGGAAGGTGCACCAGTGGGTGCGG 12538 29 100.0 33 ............................. CGACCTTGGCCCACAGCTCGCGCGAGGCGATGA 12476 29 100.0 33 ............................. CAGCCGAGATGGCGCGGTCCTGGGCGATGACCG 12414 29 100.0 33 ............................. GCGGAAACGTCAAACCGGTTGTGTGGCTGATGG 12352 29 100.0 33 ............................. TTCCGGGTACTGCGGCCCGGCGGAGTCCTGGTG 12290 29 100.0 33 ............................. CGGCCCCGTACCGTCGGGGCGATCCTGTCCCAC 12228 29 100.0 33 ............................. GCAGGATGAACCCCATAAACCCTATACGGTCAA 12166 29 100.0 33 ............................. ACCAGACAGTGGCGGTGTTCATTTGGGGCTCCT 12104 29 100.0 33 ............................. TCCGTTGATATTCCAACGTTTCCTGGCTCTCGC 12042 29 100.0 33 ............................. TGCGCGACATGGCAGCTAACTATGACGCACTGG 11980 29 100.0 33 ............................. CCGGACGCCACCGGGAGCAAGGCGATCGGCCAA 11918 29 100.0 33 ............................. GCCCCCGGACCGTGTGTCACCCGGTTTTTGCCG 11856 29 100.0 33 ............................. CCGTGAGTGGGCTAGCGGCGACTAGACCTACCC 11794 29 100.0 33 ............................. GACGTAGACCAAGAGGTCCAGGTCGCTAGGCCA 11732 29 100.0 34 ............................. CCGTCCCCGCACCGGGGCCAGGACCCGTACCGGT 11669 29 100.0 33 ............................. ATGCTCGGCATCAACGACGCCACCCTGGAAAGG 11607 29 100.0 33 ............................. TGGAGGAGGGACCCTGCTCCCGACGCCGACGAG 11545 29 100.0 33 ............................. GTGGAGCCCGCCCGCCGAGAGCCGGTCTGGGCG 11483 29 100.0 33 ............................. GCTGACCCCGCCTGGCGGATCATCCTCGCCGGG 11421 29 100.0 33 ............................. CCGTCTCGGGGCAGGAACGCTACCGCTGGACCA 11359 29 100.0 33 ............................. TGTTCGGTGCCGTATCATCCGCGTGGAATGGCA 11297 29 100.0 33 ............................. GCCATGATGGCCGGGACCATCACTATTAGCGAC 11235 29 100.0 33 ............................. ACCGTAGCTATCGGTGGTACAATCCCGCGCTCG 11173 29 96.6 33 ............................G GCAATACTTGAAGGGAGCAAGACTATGCTCAAG 11111 29 100.0 33 ............................. CCTCACAAGTTGTAGTCGCCGTTCCCTAATGCG 11049 29 100.0 33 ............................. ATATAAGAGATATCAAGTAAATACATAGTAAAG 10987 29 100.0 33 ............................. GGAGAGGGGGCCGGGGACGATGACTAGCCAGGC 10925 29 100.0 33 ............................. CACGCTCATCCGGGCTGATGACGAGGGCTTCAC 10863 29 100.0 33 ............................. CCCACTGCCCTGCGGGCGGCGGCAGCGGCGGCG 10801 29 100.0 33 ............................. GGAAATACAAATAGGAGCCGAATAATGCATACC 10739 29 100.0 33 ............................. GTGGCCGCCGCGTCCCTGCCGATGCTGCGCAAC 10677 29 100.0 33 ............................. CACCGCCGAGGAGGAGGTCCGGCAGGTAAACGC 10615 29 100.0 33 ............................. AGACCCTGGTCGCCGCCTACACGGAAAACGAAC 10553 29 100.0 33 ............................. CAACGTGTCGATCTTGGAAGACTTAGCGTCTTC 10491 29 100.0 33 ............................. TATAGCCAGGACATTGGCGTTTAGACCCTGTAG 10429 29 100.0 33 ............................. GAGGATGGGGAGACGTATTCTGCGAGTTCCAAA 10367 29 100.0 33 ............................. CGGCCCACGTGCGAGTAGGACAGCCCGAGAGTG 10305 29 100.0 33 ............................. CAGCCTCGTCGTCCACTGCGCCGACTACGCCGG 10243 29 100.0 33 ............................. GACAGCTGGGGTCGCCTCAACATCGCCTGGCAG 10181 29 100.0 33 ............................. CGGCAGAGGATAGACGCTGGGCGAGGGCAAGGA 10119 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ==================================== ================== 208 29 100.0 33 GGATTATCCACGCTACGCGCGGAGATGAC # Left flank : CCTGGATTTCGAGCCGGACTACGTGTTCTTGTCGGTGTACGACACTGCCTGCGTGCCGCCGCAGCACCCGGACGCGGCGAATCTGGGGGACGCACTTAACCGGCTCGGGGCGCGCTTCCCCCGGGCACTGTTGGGGATAGGGGAGATCGGCGCCCAAGGGGCCGAGGACGGGCTGCCGGAACCCGACACCACCGAGAAGGAGCGAGTGGCGCGCTACTACCACGGACTAGACAGCAAGCTGCGGGAGATAGTTGGTAACCGGTATGTTGGCGGCTACTTCTGGTGGTATTTCGTGCGCGATGTTCTTACTGCGGAAGATCCGCGGTTCTGGGAGGTACTGCGGGGCGAGTTAGCAAACTATGGAGCAAGCACACAAGACCTATAAAATACCTTCCCCAAAACGCCAAAACAGCTGCATGCATTTGTGTAAAAACAGCACGAGAAACATCCTTGCTACGCAGGGACAACGAAGGCTGATCGCCCTACCGACAGCAGCCCTC # Right flank : ACTTCCAAATCGGCGAACTGCCAACACCTCAGCTCGGCAAGTTTTGCGTTTTCCTTTACTCGCTACCTGAGAACGGTTCGCAGCAACTGTCACGCTGAGGCGCAGCCTATCCTACTACCGTCTGCGGAATCGCCTCGCGCTACTCCACCCCTTCTTTGCGGTGACGGTAGTGGCCATCGGGTTGCCTCCTGTCACTGGGCGCCGGACCCCGAGGTGCCCGTCCAGGTCGACCGGCACCCAGTCGTGTCCCAAAGACTTCAAAGCGTAGCCTTGCTCCGTGGGCGCCGAGTGAACGAGCAGCGCCCGTCCGCCACCTAGTTCCTCAGCGACCATTTCCCAAAGCATGTCTCTCACTCGTCCCGACACGGACCCCACAAATACTCCCGGCGCTATCTCAAGCAGCCACCGTGTCAGGGCGCCCCGCAGTGATTTGGGAACGGCAGTTAGCACCAGCACCAGCATTGCTCACCACTCCCCCGCCGCATCCTCGGCGTAGTTCA # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGATTATCCACGCTACGCGCGGAGATGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-10.30,-6.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [51.7-41.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,0.78 Confidence: LOW] # Array family : NA //