Array 1 3146-3416 		**** Predicted by CRISPRDetect 2.4 *** 
>NC_020276.1 Mycobacterium intracellulare subsp. yongonense 05-1390 plasmid pMyong2, complete sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence               	Spacer_Sequence                  	Insertion/Deletion
==========	======	======	======	==============================	=================================	==================
      3146	    30	 100.0	    31	..............................	TTGTCATTGCTGCTCATCGGCCAATTCCTCC  	
      3207	    30	 100.0	    31	..............................	ACCACAAACCGCTGGACGCCTTCGGTACGTC  	
      3268	    30	 100.0	    29	..............................	AGGCCCGTGAAGCCGCGTGGAAACCGAAT    	
      3327	    28	  86.7	    33	....G.A..-.-..................	GAGCTGCCCCCGACGCGCGGCACCGCTGCCAGG	
      3388	    29	  93.3	     0	.....-.......................A	|                                	
==========	======	======	======	==============================	=================================	==================
         5	    30	  96.0	    31	GCGCACCCCACGCGCGCACAGGTGAGTCCG	                                 	       

# Left flank :   GACCCGATCCGCCCGCGGCACCATCGACAACCCCGGCACGAACGTGCGCGCCAAAGCCGGACTTTCGCGCGCCATCCTCGACACCTCACCGGGCGAGCTGCGCCGCCAGCTCACCTACAAAACCGGCTGGTATGGCTCCACTCTCGCGATCTGCGATAGGTGGTTCCCGTCCAGCCAGCAGTGTTGCGAATGCAAAGTGAGAACCAAGCTTCGGCTTTCGCAACGCGTGTTCACCTGCCCAGCGTGTGGGTACGGACCGATCGATCGGGACGTGCACGCTGCGCGGAACATCGCCGCCTATGCGGCCGTCGCCTCCGACACCGGGGAGACGTTAACCGCCCGCCGAGATACCGCGGAAGCCCCCACACGTGTGGGTCGCCGCCGCGGTGCCGTTGACGCGGGAAGACCACACCGGGAAACCGGTGCGGCCACCCCAGCAGAGCAACCTGCTGGTCACCCAAAGCACGCAGATCAGCGCACATTACCGCTGGTCAGCTAGT
# Right flank :  AAGCCCGAGCAGTGGAACACCTCGGCCAGGCTGCGCACCCCCACGCGCATGCACTGGCCCCTAATCGCCGCCCCGGTTGCTTTGTACGGGCCGCTCCGAGCCGCAACTGAGGTTGGCGCGCTATGCGGCCTCTGACAGCGCGTGCCGGGACGAGTCCGGCCCTGCCGGCGGTGAGGCGTCGCCGCGGGTGGCTCGGTAGAGCCGCATCGCCGCGGCCAGTCGGTCCCCGCCTCGGCTCCCATTGTCGGCGTAGGCCGGTTCTCCGGCCGGGGCACTGCTGCGCCGGCCACCGCTGACCGGTGCCGGGTCGCCGTCAAGGTAGGTCGCGCCTGAATCTGGCTCACCGCCGCCACCACCAGACGGGCCACCCGACGACGCACCAGCGCCGCCACCGCCAGACGGTCCACCTCCACCACCGCCTGACGGACCGCCACCGGACGGACCACCGCCACCGCTCGCGCTCGCTGAATCTGATTCACTGTCAATGCGCGGCGGCGGGT

# Questionable array : NO	 Score: 2.86
# 	Score Detail : 1:0, 2:0, 3:0, 4:0.80, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GCGCACCCCACGCGCGCACAGGTGAGTCCG
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     F [5,2] Score: 0.37/0.37
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  NA [-2.20,-2.30] Score: 0/0.37
# 	Array degeneracy analysis prediction:      F [0-5] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: F [43.3-26.7]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [1.05,0   Confidence: HIGH] 

# Array family : NA
//