Array 1 12426-11326 **** Predicted by CRISPRDetect 2.4 *** >NZ_WCFQ01000045.1 Lactobacillus helveticus strain IMAU60204 Scaffold45, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 12425 32 100.0 34 ................................ ATTTTTAAAGGTTTTACCATCAATGCACCATTTA 12359 32 100.0 37 ................................ GCTAAATAATCAGGACGCTTTCTGCAATAATTTCTCC 12290 32 100.0 35 ................................ TGGATATGGGTACCTTAAGGAAAATCAGACTAAGT 12223 32 100.0 35 ................................ AACAACAACCTCGGTGACATAAACCCGTTGACCGT 12156 32 100.0 34 ................................ ATCATCCAAGTTGACTAAAGGGGTAATATCAGCA 12090 32 100.0 35 ................................ AAATTATTGGAGGTAAATAAAAATGAAACTCAGTA 12023 32 100.0 36 ................................ ACGATGTAAACAGTGGCGGTAATGAGGCTCAAGGGC 11955 32 100.0 34 ................................ TAATTGGGAAGTAGTGAACGGTATTGACCCTAGA 11889 32 100.0 34 ................................ TCTCACGCAATGTTAGCTACCAATCATTCTTGCA 11823 32 100.0 35 ................................ AAGCAGACAAGGCCGGAGCTGATGAATGCTGAAAA 11756 32 100.0 35 ................................ CCTACCGCTACCCACCCTGCCTTGTTAATTACTTA 11689 32 100.0 34 ................................ AAAGAGTAATCAACCTTTGTTCAGATATTGTGGG 11623 32 100.0 35 ................................ TAGTGAAGTAACTATTGCTCCAGGTGCCATTGTAA 11556 32 100.0 34 ................................ AACTAATTGACGATGGTGCTTTTGCGGCTGCATC 11490 32 100.0 34 ................................ TTCTACAGTTGCTTATTACAGTACATCATTAATT 11424 32 100.0 35 ................................ CTTTATTCCGTGGCAGCAAGCAGGCTCGATTGAAG 11357 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ===================================== ================== 17 32 100.0 35 GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT # Left flank : CGAATACCCACCGTTTATGTGGAAGTAGGTATGAAGTAGGTATGCAGCATGATGGTAGTAGTTAGTTACGATATTAATACGGAAAGTAAATCTGGTCAGCGAAGGTTACGTCATGTAGCCAAAATATGCTTAGATTATGGACAACGAGTTCAAAATTCCGTTTTTGAATGTAAAGTTAATTCGATGCAATTAGAGTTGATGAAAGAAAGACTACTAGACGAAATCGATGATAGCCAAGATAGTTTGTATTTTTTTAATTTAGGGAAGAATTATAAAAATAGAATTAAGTCATATGGAATTAAAGAGGTTATAAATTTAGAATCGCCTGTAATATTTTGATATCGGTGCGAACTGTATGTGAACATGCTTTTAGTGAAGATTCGCACCAATTTTAAACAGGTGAAAAGTGATCTTTTGATAAAAAATATATTTTTATCAGGGTAAGTTAATTTGAAGCCCAATATTTAGAAATGAATTGAAATCATGATCTAAATATTGCG # Right flank : TTTAGGTCCATTGCGCTCTTGCCAGTGAAGTCGTGTCGCACTCCTTGTGATGCACTTGTGGGTGTATTAGTCGGCTTCTTCAACCCAGGCTTGAAGTACTAATTATTAAGAGGAGATTATTCAGATGACAATCGAAGAGATGCAAAAAGGCTATCAAAATGAAGTTGCTTATCAAAAACATATGCTTCGCAATCTAGGCTATTGATTCCAACTCTTTTTAACAGTTAGTGCGATTGGTTTGGTTTTAATTTACTATTTCCATCAATCAACTATGTGGCTCTTTATAATCGGAATTATTCTGATGGTCGCCGGTGTTTTAGGAATGTTTGCTTTTGGCTATGCTTCTTGGCGCGGACGGCAGAATGTCACTCTGGTAATCGAAGACTATGAGAAAAAGATTGCAGAAATTAAAAAGTTAGATCAAAATGCTTCCGGAACGGAAAAGATCCGTTTCAAATGATTCTTATATGAATAAAACAATTTCCCCTTCTCTAGAAATT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [10,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCACTCTTAGTGAGTGCGTGGATTGAAAT with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.50,-3.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [48.3-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,9.64 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //