Array 1 885324-883730 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP026982.1 Pectobacterium parmentieri strain IFB5486 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 885323 28 100.0 32 ............................ AGCTAAACGCGGCGGTGTACTCCGCTATCGAA 885263 28 100.0 32 ............................ CTGTATAAACATACATACCCCTAAAAGCTCCT 885203 28 100.0 33 ............................ CACTGCAAATTATCCGCTTTCAGGTTTCGCAGG 885142 28 100.0 32 ............................ GCGTTTAGCTGGTGGAACAATTTAGCGTTAGC 885082 28 100.0 32 ............................ TCATTCAACGTGCTTGACTATGCCCTGCGTGT 885022 28 100.0 33 ............................ TAGAGGAAGATTCTAGCCTTTTAGATATCTTGG 884961 28 100.0 32 ............................ AGCAGAAAGCAGGGCAAGCGGCAGAAACTCGT 884901 28 100.0 32 ............................ TTCATACGCATCATTGAAGCTGTGCAGGGCAA 884841 28 100.0 33 ............................ TAGATAATAGGGGCTTATTCTTTGTTGAGGTTA 884780 28 100.0 32 ............................ TAAAGTCGGGCAATCTGTTTACGTGCCTTTCG 884720 28 100.0 32 ............................ ATAGCAAAATCTAACGCCCGCGCATCCATAAA 884660 28 100.0 33 ............................ CTACAGTAGTATCACTGTAGCAACCATCGCCCC 884599 28 100.0 32 ............................ ATGATGACGAGGCAATTTTTCTTGCGCAGCTC 884539 28 100.0 32 ............................ TGGGTAATGGTCGCTGTCACGGTCGCCTCCGT 884479 28 100.0 32 ............................ CACAATTCCAATTCATCCATGATGTGCATGAT 884419 28 100.0 33 ............................ TCATTATATAATCACTATCCGTGAATTTCATGT 884358 28 100.0 32 ............................ ATGTAAGCGCTAACAATGTTATGGTGCGCTAT 884298 28 100.0 32 ............................ GTTATCAATATTTATTCCGATGGCGCATTCAC 884238 28 96.4 33 .............T.............. CGCCGCCCGATACTGACGTTGCGCCGCTTTCGT 884177 28 96.4 32 .............T.............. GCTGATTAACGATAAGTGGATGGAATTTCTGA 884117 28 96.4 32 .............T.............. GTGGAGGGCGGGTTTTACGGGTCGCTAATTGC 884057 28 96.4 32 .............T.............. GTGCACCGAATGTGGCTGTCGTGAAACTCGGC 883997 28 100.0 32 ............................ GTTAAATTCCAGCGTTTGGTATTGGGCAATCA 883937 28 100.0 32 ............................ AGCCACCTCTGCCAGTTTTCCGTACAGCGTGA 883877 28 96.4 32 ..C......................... AGAATGGAGCCAATCACGTTTCAGTACAATAT 883817 28 100.0 32 ............................ AGATCACAGTGAACAGGAAAACGATATTCAGC 883757 28 78.6 0 ............G.......T.C..TGT | ========== ====== ====== ====== ============================ ================================= ================== 27 28 98.5 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : GTGACGGAGGTGCCGGTTCCCAACATCACAACGCTGGTATTGGCGATGGGAATATTCCAGTACAGCGACTGACTTCCCTCTTCCGTGACATATTCGACACGGCCACCGTTGACGAGAATGCGACAATGCTGAAGATAATAAACATTGGCGCGTTTGGAATGCAGAATTGTTTTTAAGTCCGAAGGGCTAAAAGCGTTATCCATAATGTATTTTCTGCCGCGATCGATAATAGGTGTTGATGCCAGCGAAATTAATCGCAGACTAACTATTTAATAAATAAAAATATAATCTTCAGAAAACTAACGAAAATCAGCCTATCACAGATAGTTTGGGAAAATGATGGCTACAAAAAATATTACCCAGATGCAGACCCTTTTTATTTGGTCTATTTCACAGGATTAAAAATCAATGAGTTACAGTTAGGCTGAAAAAAAGGGTTTTTGCGGCAAAAACGGTGATTGCTGCTAATAAAACAAATCGTTAGAGTGATCGGGCTACAG # Right flank : TTATCGAGATAAGTCGCTGGTACGATTCGCTTCAAGGGAGCTATTCCCCATTCAGCGTAACGACCAGCGAGCGGCTGCCGCCGTGGTTGCGGTGTTCGCACAGGTAGATACCCTGCCAGGTGCCGATGTTCAGGCATCCGTCGGTGATGGGGAGCGTGAGGCTGTTTCCCAGCAGGCTGCCTTTCAGGTGCGCGGGCATGTCGTCACTGCCTTCATAAATATGGCGGTAGTACGGTTCATCCTCCGGCACTAACCGATTAAAGAAGCTCTCGAAATCCTGCCTCACCGTGGGGTCCGCATTCTCATTAATCGTTAGCGCCGCCGAGGTATGTTTGATGAACACATGCATCAGTCCGGCTTTTATCTGACGCAGTGCAGTGACCTGCGCCAGTATTTCATCCGTCACCAGATGGAAGCCTCTGGCTTTCGGCTTCAGGCGGATTTCATATTGCGCCCACATGATTTGGCCTCTCGCTATCAGGCTTCGCGTGCCAGAATCG # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [53.3-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 904602-902539 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP026982.1 Pectobacterium parmentieri strain IFB5486 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 904601 28 100.0 33 ............................ CGCAGGAAGAATCTTTTATAACATAAACAGAAT 904540 28 100.0 32 ............................ TTAACTTCATCGAGCACGCCCAGCAGTTTAGC 904480 28 100.0 32 ............................ CTAAGCACGGCTATTAATTGCCTTATTCCAAT 904420 28 100.0 32 ............................ TCTGAAACGCTAAACGGCGTAACGTGCACTAA 904360 28 100.0 32 ............................ TTAGCGACTGCAACGCTAATTAATAATAGGAT 904300 28 100.0 32 ............................ GTTAACAGTAAATTCACCGTCACGGTAATAGT 904240 28 100.0 32 ............................ TTCCACGTGACCCAATATAGAACTATCAGAGT 904180 28 100.0 32 ............................ TATGCTAACGGCGCTCGTACTCTCTTGGATTT 904120 28 100.0 32 ............................ AGTGCTGGATGACGTCACGCTCGACGTTATTC 904060 28 100.0 32 ............................ GTATATGATGACCATAAAGGCGTGTTAGAAGT 904000 28 100.0 32 ............................ ACGGGTCGTATGCAAATTCGTTAAGTGAGTCG 903940 28 100.0 32 ............................ GACATGCAAACCCGTCAGCGTGAAGTTGCTGC 903880 28 100.0 32 ............................ ACCGTTTCCCAGGCTGTTATGCAGTTAATTAA 903820 28 100.0 32 ............................ ATAACGGCATGTGCCAGATCAACGGCATCTGA 903760 28 100.0 32 ............................ TTGGGCAATGGGCAGTGCGCCCGTTGCTCGTC 903700 28 100.0 25 ............................ TAGCGCCCCGCTGCCTGCACTAAAG Deletion [903648] 903647 28 100.0 32 ............................ GCTCATCACTGCGCCGTGTGCGTGTTTATCAA 903587 28 100.0 32 ............................ ATCACCCTCTACCGCCGCCGCGACACGCACCA 903527 28 100.0 32 ............................ GTTTATCTCGACGGGCATTGTATCCTTTGTAT 903467 28 100.0 32 ............................ TCTTACGCGTGAGGCATACATTGATATCCTAT 903407 28 100.0 32 ............................ ACAGTCTAGTACTGACCTCTCCGGTTGAAATG 903347 28 100.0 32 ............................ CTCTTTCGACCACACTGAATACGCCAGCGATG 903287 28 100.0 32 ............................ GGCTGCGTTCTCCGATACCAGATGACCTGAAT 903227 28 100.0 32 ............................ AAGGTGCGAAAGCCACAGCGTCATGAAACCAA 903167 28 100.0 32 ............................ TTTTGAGGCCAATCACATTCTGAAGCTTAAAT 903107 28 100.0 32 ............................ AGCGCAGAACCACCCACGCTAACCCGCGAATC 903047 28 100.0 32 ............................ ATAAATTACGCCGGTTTGAGTCCTGACAAAAA 902987 28 100.0 32 ............................ ACGGATGACCGAGTGACCGGCGACGAATACCA 902927 28 100.0 32 ............................ GAGAGCGGAACGATGTGATCCACCGCCCTGTC 902867 28 100.0 32 ............................ AGTCGGCTCAATTGGCACCAGCGCCCAACCTT 902807 28 100.0 32 ............................ TTGCCTACATACCATAAATTACGTCTAGCTGA 902747 28 100.0 32 ............................ CGGTAAGCAGATAAAAATTTATGGCGGAAAGG 902687 28 100.0 32 ............................ GCAATGCGTGGGGCGGCATGGTATTGAAAGAA 902627 28 100.0 32 ............................ GGGCGCGCTGTCATGCTGCGCATCGAGCCAGC 902567 28 85.7 0 A...........GC..........A... | G [902541] ========== ====== ====== ====== ============================ ================================= ================== 35 28 99.6 32 GTTCACTGCCGTATAGGCAGCTTAGAAA # Left flank : CGCCTGGCGAACTGCATGTTTCCATATTGGTGGGCGTAGCGATGACCACTATCGGCATCGTGAAATATCGGCACGCCCAGCACAATTCGAGACCTCATAGCCCAGTGCGGAGCAAAACCGTTACCCAAAAAACGCGCTCCACAAACACAATCACCGCCAAAACAATCGCCGCATTCGTACTGATCGCGCTTTATCTGGTACTCCCACTGCATCTCTATCTGCGTGAACCTTTACCCTACTGCGCCTTTAGCCCCAGCGGGCAGCAGCTAAGTATCTGTCTGGGAGAGGATGACGAACGGATCATTGTGGAGTGATGCAGATTGGAACAGGCCGAGACAAAGAATAAAATCTACAACGCGCTTCCTCCAAGACCCTTTTTTAACGGCTAGTCGTAATTTACTGATTTTTAATCACCTACAGCCTCGATTGTAAAAAAGGGTTTTTCCGAGAAAACAGGGTATTCGCTTTAATAATCTGGTAATTAGCATAAAACTCTTACG # Right flank : CAAAACGTTTCGGAAATCAGCGATAAAAAACTCATAGGCAACGCGGCTTAAAAAGCTGGTAGTCTGTTTGACTGACTATCTGACACTGTTTAGGGAACGCGATGTACAACATTGATGATTTCGATCTGAAAATTCTGACGCTGCTGCAAACCAATGGCCGCCTGACCAATCAGGAACTGAGTGAGTTGGTCGGGCTTTCCGCCTCACAGTGCTCCCGCCGCCGCATCGCGCTGGAACAGGCACAACTGATCCTCGGCTATCATGCCCGACTGTCACCGAATGCCGTTGGTCTGGAATGTCTGGGGTTAATTGAGGTGCGGCTGATCAACCACACCAGCGAATACGTTGAACGCTTTCACCAGATGCTAGGGGAAGTGGATGCGATTATCGATGCCTATAAGACGACGGGTGATGCCGATTATCTGTTAAAAGTCGCCGTCGCGGATCTGCCAGGGCTCAGCACGCTGATTAGCCAGATTCTGTCGCAGAACAAGAGTGTC # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.00, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched GTTCACTGCCGTATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 3 4413298-4412598 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP026982.1 Pectobacterium parmentieri strain IFB5486 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 4413297 29 100.0 32 ............................. CCCTCTCCGGAGGGTTTTTTTACGTCTGGAGA 4413236 29 100.0 32 ............................. GAAATCAGAGCCCTTGGTGGAGATGGGAGCGC 4413175 29 100.0 32 ............................. CAGGTTCGCGGTTTGCAAGAATACGTCCGCGA 4413114 29 100.0 32 ............................. CGCGATCCTGCCGTTCAGGTAATGTCCTACCG 4413053 29 100.0 32 ............................. GGCGCTAGACTGGCTAAGACTGGATTCATCAA 4412992 29 100.0 32 ............................. GTTTTTTTGATCTCTCGGAATCTACCAATGCA 4412931 29 100.0 32 ............................. TCCTGTTGAGTTAACGCTATGGATTTAACTGA 4412870 29 100.0 32 ............................. GAACATCATCCAACCATATTTTTTGGCGATAT 4412809 29 100.0 32 ............................. CATGAAAGACAGATACCGTGATTTATCTAGAA 4412748 29 100.0 32 ............................. GGCGGAAAAGCCGCATTGCCGTGGCAAGTTGC 4412687 29 100.0 32 ............................. TTATTGAATGTTGTGATTGCCGGAATCAGATC 4412626 29 96.6 0 ...........................G. | ========== ====== ====== ====== ============================= ================================ ================== 12 29 99.7 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTTTGTAGCTTTCAACGAGCGTATTAAAGCGCTCCCTGCTGGTATCGCTTTGCTGCGCATACTTATGGATCAGCATGGGCTAACGCAAAGTGACTTTGAAGCTGAGATCGGTAAAAAATCTCTGGTATCCCGAATTCTAAATGGTGAGCGTACACTAACGGTTGATCACATGAGCGCACTTGCTAAACGATTTGATATTCCCGTGAGTGCTTTTGTTGATTAGTACGATTTTTGCCAAGTACAGCATGATGCGTCATGTAATAAAGACTGCCGTGCTGGAGTGTTATCTGAATAATCCCTGCGTTAGCAGGGATTACTTTATGGCTGAGACGCATTGTAAGAAATTATTGAAAGGAATGCCGGTAGGTCTGGACGGCCTGCTGTTAGCCTCTTTTTCATCTATTGAAAATCAATAAGTTGGCGATATTTAACAACATGGAAAAATCGGTGGGATTTTCTCTACTGAAAAAAGTTTTATAAAACAAACCTCTACTTTTAGA # Right flank : TTATACCCCTTGTTGCATGTTGGTCTAAATATTCCCCGCATGCGGACAAATCCCGCTTCTAGCTGGCGCGATGGCAAATTGCGTGTCAGTATTACAGAACGCTGTTTTTGTGCTCACCGTACTGGTGCGGCACGATATCCATAATTTTTTGTCTTCCATACGTTACCCGTAAGGAGGTGGTATGAAAGTTGAAGCCGCAGAGTCCTCCGTTTTTGCCAGCCAGCAGGTGATGGCGAAGCGTTCCACAGAGCATGCGGAGAAAGTGGCGCTGTCCGAACAGCTTCAGCCTTATCAGGCGGGCAGCGGTGCCGTTCCTGCTGGTCAGACGACACGCTATGATTTTACCCGCATCAGCCCTGCCGAACTGTATGAAACGGTAGAAGGTCTTGTCAGCAGCGGACAACTGGGGCGCGAAGAGGGCTCCGCACTGCTGGGTTTTATTTCGTCGCCGCGAGAGAATATCGGCAGTGTGCCGCCTTCTAATGTGTTCCAGCCAATTA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [53.3-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 4 4416234-4415167 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP026982.1 Pectobacterium parmentieri strain IFB5486 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 4416233 29 100.0 32 ............................. CGCTCGGCAGCAGCAGGCTCTATATGCTGGAC 4416172 29 100.0 32 ............................. GCGCATCGCAAGGTCGAAGTCTGATTTAGTGT 4416111 29 100.0 32 ............................. CAGTTGGGCCTCAAGTCTGGAGGGGATGAATC 4416050 29 100.0 32 ............................. GACATGGAGAACATCAAGAACCTTGTTTGGAT 4415989 29 100.0 32 ............................. AGACTGCTTAACTCTGCTGCCGTCTGGCGCTG 4415928 29 100.0 32 ............................. AGCGGCACCGATTTGCCCTGACATTGACGTGT 4415867 29 100.0 32 ............................. GTTCGTGGATCATTCGCCACTGGTGGATACCT 4415806 29 100.0 32 ............................. ATCGCAAATAAGCCCAATAGGTCGATTCATTG 4415745 29 100.0 32 ............................. AAATCGTTATCAGGGACGCCCATGTTTACGGA 4415684 29 96.6 32 ............................T GGTTTAATGGCGAATCGGTGCCAAGAAAGGAG 4415623 29 100.0 32 ............................. GCTGCAACTGAGTTTGCAGATCAAAGAAACTT 4415562 29 100.0 32 ............................. CCTCCGAAGAGGCTATTCATCTGGTTTTAATT 4415501 29 100.0 32 ............................. TCGTATGTATCGATCGCTGATAACAACACGTC 4415440 29 100.0 32 ............................. GGGGCTGGTGTGTTTGGAGAGGCGGGGCCAGA 4415379 29 100.0 32 ............................. GTTAGATAGCTCTCTCGTAACGGAGGTGATCG 4415318 29 100.0 33 ............................. TGCTAATTTGTAACCTTCCGGTATTACCGGAGA 4415256 29 100.0 32 ............................. TTCCAACCCTTTCAGCAAGCTCTACCTGAGTA 4415195 29 96.6 0 ............................C | ========== ====== ====== ====== ============================= ================================= ================== 18 29 99.6 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : TGATTGAAGAGGTATTGTCTGCGGGAGGGATTACGCCACCGCTGCCACCGGACGATGCTCAGCCGCCTGCGATCCCTGAACCGAAACCGTTTGGTGACAGCGGCCACCGAGGACAGGGTTAAATGAGCATGCTGGTGGTTGTGACGGAAAATGTTCCGCCGCGTTTACGCGGCAGGCTGGCGGTGTGGTTGCTGGAGGTTCGTGCGGGTGTTTATGTGGGTGACACCTCGCAGCGGGTGAGGGAGATGGTCTGGCAGCAGATTATCGAACTGGCAGAACAGGGCAACGTGGTAATGGCGTGGGCGACGAATACGGAGTCCGGTTTTGAATTCCAAACCTGGGGTGAAAATCGCCGAATGCCGGTAGATCTGGATGGCCTGCGGTTAGTCTCTTTCTCACCTATTGAAAATCAATAAGTTAGCGATCTTTAACAACATGGAAAAATCGGTGGGATTTTTTCTACCGAAAAAAGTGTTATAAAACAACTCTCTACTTTTAGA # Right flank : TAATCCGTGGAAGCGGCTACAGGATTAGCTGTTCTGGTTCGCAGTGGTACAGCTTAGCCAGCTTTTCTCGGGTGCGCTTCTGCGGCCTTGAATCTGGGGATTCAAGCTGAGAGACGGCCGCTTGGGTCATGCCAAGCGCGGTTGCAACTTCTTGCTGAGAGAAGCCTCTGAAAATTCTCCAGGCTGCCTGTAAGCTGACGTCTTGATCAATGTGGATGCTAACCACTTCATGAGGAATAGAGACGTCATCCTCTGCGCTATGATCGTAGGGAATGCTCTCATAGAGGGCGGGGTCGTCAGCATTTTCAATAAGTTTCTGATATAACTCGTACGGAACAACAGCATATTCAGGTTTACCGCTTTTATCCCGAATGACTTGTATGCTCATAGTGTATTGCTCCAACATTTTCTTTCGATGGGTGAAAATCAGTTGTGGTGTAAAGAAGGACGCATTTTCCTCCTCAATATGTCGTCGTTGTCCTGCGTTTGATTTCAAGTAT # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [48.3-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //