Array 1 196101-192234 **** Predicted by CRISPRDetect 2.4 *** >NZ_LQPG01000017.1 Mycolicibacter longobardus strain DSM 45394 contig_24, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================== ================== 196100 37 100.0 36 ..................................... TCCACAGATTCTAGCTGATAAGTGGCTGAGTGCGTG 196027 37 100.0 37 ..................................... TCCAAGCAGCCATCGCCCTGCGCGGCCGTCGAATTGA 195953 37 100.0 38 ..................................... CTCGTAAATGGTCATGGCTTGCATGGTATGCGCTTGCA 195878 37 100.0 38 ..................................... GAAGCCAAGGCGGCCGAGAAAGACACCCGGATTTCGGA 195803 37 100.0 36 ..................................... ACCAAGCCAGCACCCGAGGCCGTCAACTGATGGCGC 195730 37 100.0 37 ..................................... TTCAACCAGCTGGGCGCCGCGATCCGGGATGTGCCGA 195656 37 100.0 33 ..................................... AAGGAACTGATCCACTACGCGGGGTTCCTGGGC 195586 37 100.0 35 ..................................... ATATCGATCCGCGGGGCGCGATCCCGACGGTGCGG 195514 37 100.0 39 ..................................... GACCACTGGACCTTGGACTGGTGACCCGACCTGGCTCGC 195438 37 100.0 36 ..................................... CTCACCGACGGATTCGTCCCGGCCTGGTTCGTCCAC 195365 37 100.0 37 ..................................... GACATCCGAGTTCGGGGATCTCTCCCATTGCGACCCA 195291 37 100.0 38 ..................................... GTCGAGAACGTCATGTGGCGGATCACTCCCCGGGCCCG 195216 37 100.0 35 ..................................... TTCGACAACCTCGAACGGAAACGCAAGATGACCGG 195144 37 100.0 37 ..................................... TACGGCAACGACGAGGTCGCCGCGGTCAACGAGATGC 195070 37 100.0 32 ..................................... GAGGTGGACGCCAACGGCTGGCTTCACGTCAA 195001 37 100.0 37 ..................................... TGGAGCCGTGATGGCGGTCTGGGCCGATGGTGTTGAG 194927 37 97.3 36 ......T.............................. CTGAACTCGATGCACGCCCAGGTGTTCGGTGATGGT 194854 37 100.0 39 ..................................... CTCGTAAATGGTCATACCTGCATGCTATGTGCTTGCCGG 194778 37 100.0 38 ..................................... GAACCCAGCCGCATCGGGGCCGGAGTGATGACCGCCGT 194703 37 100.0 38 ..................................... TGCGACTGCCTAGCTGGCGTCGCTGGCGGCACCGTCAG 194628 37 100.0 38 ..................................... GCGCTTGATTGCCCGTGGTGCGGTGGTGGTGCTCATGG 194553 37 100.0 39 ..................................... CCACCCACCAACGCGGGGGTGAACTACGACGACCCCCTG 194477 37 100.0 38 ..................................... GACCCCTACGCCGACGAACGCACCGCAGCCACACCAGA 194402 37 100.0 37 ..................................... CGCCGACCCGGCAATGCCGACGGCGGAGCTGCGGGCC 194328 37 100.0 35 ..................................... CCCGACGGGCGTCGGTGGGACGGAAGGCAGTTCGT 194256 37 100.0 37 ..................................... CTCTGCGGAGGGTGTGCCGACGACGATCGACGACCAG 194182 37 100.0 37 ..................................... CTCTGCGGAGGGTGTGCCGACGACGATCGACGACCAG 194108 37 100.0 36 ..................................... GAGGGCATCACCCCCGAACAGGCATTGCAGTACAAG 194035 37 100.0 39 ..................................... AACAACGGAGCCATCCCCTTCGACAACGAGTCCGGTGTG 193959 37 100.0 36 ..................................... ATGCGCACCGCCGAGGTGGTGAAGTCCCCCAACGTG 193886 37 100.0 36 ..................................... TCGCAACTCGTCGTCGACGGCGACTACGGGCTTGCA 193813 37 100.0 37 ..................................... GAAGACTTGCGCCTGCGGTGAGCCGTGCGCGATGCCA 193739 37 100.0 37 ..................................... CTCGACTGGCCCTGCCCGACCATCCGGGCCATCCGAG 193665 37 100.0 40 ..................................... CCGCATACTATGTGCTTGCTGGGTTAATAGTTCACACCCC 193588 37 100.0 38 ..................................... TGCATCCAAGGCAACCCGACGATGCTCACCTTGTTGTT 193513 37 100.0 37 ..................................... ATGGCATCGCAGCCACCGCGACTGGCGCCGTTCCACC 193439 37 100.0 35 ..................................... GACGCGCTACTCGACCGTCTCGCGGACACCGCCGT 193367 37 100.0 36 ..................................... CTGGCCAACCCGCGGCGGTGCGTGGACTGCGGGGGA 193294 37 97.3 38 .......G............................. GCCTCAACGGGTAGGTGCGCGGCGTGCGACTCTATGAG 193219 37 100.0 34 ..................................... GTCGAGTTCAACCTGCAATCGAAGCTGGCCGGAT 193148 37 97.3 34 ......A.............................. ACGGTGACTACGTCGCGTGATGACTGGGATTTCA 193077 37 97.3 35 ...............................C..... TGCACCTCGCCGCGTGAGAGCTGCCAGCCCTCGTT 193005 37 100.0 36 ..................................... ACCAGCGACATCAGCGAGCCACGGAACACGTCCCGG 192932 37 100.0 38 ..................................... GGCGACACCACCGATGCGGGTCCGGGCGTGAGGACCCG 192857 37 100.0 37 ..................................... GCCTCTTGGATGAGGGTTGCGACCTCGGCGCGGGAAA 192783 37 100.0 36 ..................................... CGCGGTACCCGTTGACCCCGTCAACGCCGTTGGTCG 192710 37 100.0 36 ..................................... CAGGACCGCGCTGGCGGCTGGCGTTGGCGCCTGAAA 192637 37 100.0 37 ..................................... CACTACACCTGCCCGGCGCACATCACCGAGATCCTGG 192563 37 100.0 35 ..................................... ACCCCGTCGTTCATTGCGGATGCGATCAAGCGGGC 192491 37 91.9 38 .......................A....T...C.... CCCGGTAAGGTGGGTCGCATCGGGCATCCCCGCACGCC 192416 36 89.2 35 G....T........A..-................... CGTGAAGACGACCCGGGTCGGGCGGAGCTGCGGCG 192345 37 89.2 38 .............TC.................A.A.. TCGATCATCATCCCTGATGAGGATCTTCACGGTCGGCA 192270 37 75.7 0 ....A.....C..G...T.....C.C....CA..A.. | ========== ====== ====== ====== ===================================== ======================================== ================== 53 37 98.8 37 CCCGCCGCGGTTTCGGCCGCGGCGCTTTCGTTGAGGC # Left flank : CTCGCGACGATGTACGCCGTACCCTCGTCGCGTATGACGTCACCCACGATAAGCGACGAAATCAACTGGCCAAGGCCCTGGGCAGATACGGTGACCGCATCCAGTACAGTGTCGTCGTTGTTGACACCACGCCTGCAAAGATGATCCGGCTTCGGACAGAGATCTCACGGATCATCAACCACTCTGTCGATTCCCTCCTTCTTTGTGATCTTGGACCCGTCGCCCGGCTATCTGGTCGGCAATTTGAGTTCGAAGGCGCCCGCCGTCCCATGACTGAGTCCGATAGCTTCATTGTGTAGCCAGCGCTTACCAGCTACGCGCATACGCGAGCAGTCCGATACTGCATCGTCTACCGGCGACGTCTCGTACACCAAACATCCAGCTCACGGTCGCTGTGCCGAATCTAGCCATCACAAGTACGGTACGCGTGTGAATTCTGAGAATCGGCCTCGCCGACAGCGTGCATCACTGCTGCTCAAAATGGTATTTTGGCCAGGGCT # Right flank : GACGCTTTATGCGGCATCGGGGTCGCTGCCCAACGCCTCGCCCACTTTGCGCACCAGCCCGACCGCGGTGCGCGCCCACGCGGCGGTGGCGCCGGCCATTCCGCAGGTCGGGCTGATGCCGACCCGTTCGGCCAGCACCGAGCGGGCGAAGCCGATCCGGTCGGTGATCGCGGCGACCGCGGCGGCCAGCTCCTCCACCGAGGGCCGCCGGGCTGGCGCGATCGCCGGAACCAGCCCCATCACCACGGTGCGGCCCGAGTCGATGAAGGCACCGATCTGGTCGAAGTCGGCCGGGTCCAACGCCGTGCAGTCCAGCGCCAGCGCCGTGATACCGCTGCGCTGCAACACAGTCCACGGCAAGCCCGAAGCACAGCTGTGCACCAGCACGTCACCACCCACCGTCTCGGCGCAGGCGTCGAGCAGCGCGGCGGCCACCGCCTCGTCGATGGCCGGCACCGGGCTCAAGGTGGTGACCCCGGCCAACCGACCGGTGACCGCGG # Questionable array : NO Score: 3.20 # Score Detail : 1:0, 2:0, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCCGCCGCGGTTTCGGCCGCGGCGCTTTCGTTGAGGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,1] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-7.90,-10.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [23-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [31.7-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,1.05 Confidence: MEDIUM] # Array family : NA //