Array 1 466294-464041 **** Predicted by CRISPRDetect 2.4 *** >NZ_CADFAR010000001.1 Burkholderia gladioli strain BCC1829, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 466293 28 100.0 32 ............................ GCCCTCGCCTTCGATCCCGATCGCCGCCCCCT 466233 28 100.0 32 ............................ GATTTCCTCACGCTGACGGACGGCCTGTCCGT 466173 28 100.0 33 ............................ ATCGTGCGATTCACGCGGATGCGCGGCACCTGC 466112 28 100.0 32 ............................ GAAGGCATGTCCGGCATGTCGATCGGTACGAG 466052 28 100.0 32 ............................ AGTGGCGAAGGTTCGATAGATCGCAGTTCTCC 465992 28 100.0 32 ............................ TGCGAAGCGATTGAGGGCGTCCTCGCATCAGG 465932 28 100.0 33 ............................ CATCCGCGCAGCCGCGAAGCGTCTCGACGCCGC 465871 28 100.0 32 ............................ TCGATCCCTACGGATTCGAGCGCTCGATCCTT 465811 28 100.0 32 ............................ TTCTCGCGCTGCTCGGCGGGCGGCAACTTGGC 465751 28 100.0 32 ............................ TTCGGACCGCTGCTGCGCACCCTAGCCGACAT 465691 28 100.0 32 ............................ TTCGCGAGCGCGGAGCGGATCTTGTCGCGCAG 465631 28 100.0 32 ............................ TCGAACGCGCGCTTCCCTGCAAGCGGTTTAGC 465571 28 100.0 32 ............................ ATCCGGGCACGCAGCAAGGCGAAAGATAACGG 465511 28 100.0 32 ............................ TCGGCAGCAGCGTCGGCCGCCTCGGTGTCGTC 465451 28 100.0 32 ............................ GTATGAAAGTTGCAGGCGCTCGGCGACTTGCC 465391 28 100.0 32 ............................ ACCTTGAAGTGCGCGCCGTCTGGTCCGGCAAC 465331 28 100.0 32 ............................ AGCCTTCCCGCGCGCTGGTCAACGCTTTCGAA 465271 28 100.0 32 ............................ ACGAGCTCGGCGCACACGTCCTTGTAGTCCTC 465211 28 100.0 32 ............................ TTCCCTGCATCGCCGGCGCAGTGGCGCGCCCA 465151 28 100.0 32 ............................ AGTAGGTCAGGTCAGTTGCATCGAAGGGCGCG 465091 28 100.0 32 ............................ TTTCGACTGCGGCCGACAACTTCGAGATCAAT 465031 28 100.0 32 ............................ TGAAGAAGACAGAGGCGAGCGCCCCGCAAATC 464971 28 100.0 32 ............................ AATGCAATGGCGCCGGACGCGAGCACCGGCAG 464911 28 100.0 32 ............................ GTCCCTTTGCCGCCGCCGAGCAGCCGGCGGAT 464851 28 100.0 33 ............................ AGACCGGGAAACCATCCAGTTCGCGGATCGCGT 464790 28 100.0 32 ............................ ATCGCTTACCCGTCGCATGACACCTCCTGTTG 464730 28 100.0 32 ............................ GTAAAGAAACGACCTCTCACATCCGAAGAAAT 464670 28 100.0 32 ............................ GCTACAGGAGAACGACGTTGAAAACGCCAACG 464610 28 100.0 32 ............................ ATCCGCCTACAGGAGACGGAACGACAGCAGCC 464550 28 100.0 33 ............................ GCGTGAGGATGGTATTCGCCAGACGCGCAAGGC 464489 28 100.0 32 ............................ CTTGGTACTTGCCTTGATTTTGCCGGCTTTGC 464429 28 100.0 32 ............................ TAGAAGGCAATGACTACGCGATGGGGATTGCT 464369 28 100.0 32 ............................ TCAGGGCGCGCAGGGTGGAAAGGGAGGCGAAG 464309 28 100.0 32 ............................ AAGGACCGGCTCCGCGTGCGCACAAGTTCGAA 464249 28 100.0 32 ............................ GATACAGCGCGTTGCGCAGCGCCGAGTCGAAC 464189 28 100.0 32 ............................ GCTGGCGAGACGACGAACCTCAAGGACATCGC 464129 28 100.0 32 ............................ ACCAGCAATCCGCGCTTGATCAACTCGACGAG 464069 28 92.9 0 ...........T.C.............. | T [464045] ========== ====== ====== ====== ============================ ================================= ================== 38 28 99.8 32 GTTCGCTGCCGCGTAGGCAGCTTAGAAA # Left flank : ATGGTTTGCATTCGCTGATGGCGCAGTCCTGGCTGCAGGGGATGCGGGATCACGTGGCGATCGCGACGCTGGCGCCCGTGCCGGACGGCGCGATGCATCTGGTCGTGCGACGACGGCAGTTCAAGACCAACGCGGACCGTCTGCGGCGGCGACGGATGCAGCGCAAAGGGGAAACGGCCGAGCAGGCTGCCGCGCATATTCCCGATTCCGTCGAGCGTCGGCCTGATCTTCCGTATGTGCGTCTACGCAGCGCGAGCACGGGACAGGTGTTTTGCCTCTTTGTCGAGCAGGGGGGCGCGGTGAGCGAGCAGGTGCCTGGGGCGTTCAATGTCTATGGGCTGAGCCAGGGGGCGACGGTGCCCTGGTTTTAACCCTTTTCTTGGGCTGATTTGGTTGGCCTTTGAAATCAATGGGTTAGCGAGAGGGTGGAAATTTGGGTGGTTTGCCCTTTCGCGGGTGTTTGCTGTTTGGAAACAAGGGGTTGGAGGGGGAAGGGGCTA # Right flank : CTGCGATATGAAAGTCTGGCAGACAGGCAAGCTTTGCCTCCAGCGCGCGTGCTTTAAAATCACAGCGCCAACGGCATCGTCACCGAAGTCGTTGATATGACGAGGCATCCTCGCAGACTGGCTCGAATACCGAGTCGTCCGCGATTCGCGCATGTTCGCACCCGATCGCGGCACAGGCAGCGCCACAAACCAGACAGAAAACAGGACAACAGGCCGATGACATTCAGTCGCAAGATGGCGCAGTGGGCAGCCGCCGCATTGGCCATCACCTCCCTGCAGGTGACCAACGCGAACGCACAGACCTTGAACATACCGCTCGGCACGCCCGACGGATTCTCCGCATCATCGATCAAGAACGTGGGCCAGGACCGCTATTGCATCAGCGGCCGCGTGTATGACGACGCGGGGCCGAGCAACACGGCGATGGCCGTGCTGGTGGACGCCCGGCATCGTACCGTGTCGTGGAAGACCTCGATCCCGCATCCGCGCGACTACGCCGG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCGCTGCCGCGTAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [6,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCGCTGCCGCGTAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [48.3-43.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //