Array 1 495112-493865 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP046907.1 Streptomyces sp. SCUT-3 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 495111 28 100.0 33 ............................ CCCGGACCCGGCACCGCCGCTGGGCCCGGGGGA 495050 28 100.0 33 ............................ TGTCATCAAGCGACACGAGGGGCCATAGGCGAC 494989 28 100.0 33 ............................ CCGCGGTTAATGCCGTCTCAGGCGGCCTCGTCC 494928 27 96.4 33 .................-.......... GGTCACACTCCGCACGCCATGCATCGGTATCGG 494868 28 100.0 33 ............................ ATGCGTCGAGGGCCCGCCGTTGGCGCGGCGGAC 494807 28 100.0 33 ............................ CCATTGCGGCACCTACCGGTATCGTCATTCAGG 494746 28 100.0 33 ............................ GGCCGGGTGCGGCACCCGGTGTACGGCAACCGC 494685 28 100.0 33 ............................ TCGCGATGGCCGGCACCGGCCTCGGCCTGCTGC 494624 28 100.0 33 ............................ GGCCGACACCGAGCTGCCCCCCGAGCTGCAGGA 494563 28 100.0 33 ............................ GTCCTACGAGGCCGACGGCGCCTGGGTCGACAT 494502 28 100.0 33 ............................ CCCCTTCGCACCCCCCACCGTCCCCGAGCCGAC 494441 28 100.0 33 ............................ CGCCCAGTAGGCGCGGTCACGCGACTGGGGGAC 494380 28 100.0 33 ............................ GAGAATCCGGTTCCCTTCCTTGTACGAATGCAG 494319 28 100.0 33 ............................ TGCGAGAACCTCGGGGACGGCAAGGACCCATGG 494258 28 100.0 33 ............................ GGTCGACCCCCGCGGCTTCTCCATGGACTCCTT 494197 28 96.4 33 ........T................... CAGCCGGTCGACGGCGAGGGACTCGGTGGTGTG 494136 28 100.0 33 ............................ CCACAGTTCGGGGTCTGCCTGCGCGCAGAGGGC 494075 28 100.0 33 ............................ CCTGCGGTTCTCCATCACGTCGATGGGCTGGGA 494014 28 100.0 33 ............................ CTCGTACTGGGTTAAGCAGGACGGGGAACTGGT 493953 28 100.0 33 ............................ GACGTCGGACTGGACCGTCCACACGCCGGCCGC 493892 28 75.0 0 ............T.T.......CG.CGA | ========== ====== ====== ====== ============================ ================================= ================== 21 28 98.5 33 GTCGTCCCCGCACCCGCGGGGGTAGTTC # Left flank : GAAGAGGACTCGGGAGGCCTGTGGGACGACGGGGACGGCGTGGTCGGCGGGGGACGTAACTGGGGCACCTACGTCTTCGACCCGGACAGCCACCTCGACATCATCCCGGACCCGGTCGGAGACACGGCCACATGAGCGCCGCAACGACAGTGGTGGTCCTCATCGCGGCCCCTCCGGGGCTCCGAGGGCACCTGACCCGTTGGTTCATCGAGGTGGCCCCCGGCGTATTCGTCGGTAGCCCGAATGCTCGGATCCGTGACGGACTGTGGAAAGTCCTGGCCGACCGTATCCGCGACGGCCAAGCCGTCATGATCGAGCCGGCCCGGACGGAGCAGGGATGGACCGTCCGCACAGCCGGCCAGGAACGCTGGACCCCCACGGACTTCGACGGACTCACCTTGATGTCCAGGCCACGAGGGAACTCCGGACAGCCTTGGAGGGCATCGAACGAAGTAAAGAAAAACGGCATGATCACGTGACAACACCCCAGGTCAGTAAGG # Right flank : TCGGGTCGCACGGACGCCATGATTGTTGGACCCGGCCGGTGCGGAGAACGGTGAGGTGACAACAGACGGCCCCTGCAGACCCATCGGCAGGGACCAGTGACGGACGGGCTGAACAGTCCGTTCCGTTCAGAAGAGTGCCGTGGTTTTGTCGGGTTTATCGGTCACTTGCTGTTGACGAGGGCAGCGAGGCGGCATCCGGCGTCCAGGAGGGTGGGGAGGTCGGTGCCGCGACGATGACGGCCTCGTCGCGGTGGATGGCATCGGTCGAGTAGGTGGCATTCTTGGTCTCACCGGTGAGATCGACGGCTAAGACGTCGCCGGAGACCGGTTCAGCACTGAAGTGCTCGGCCTGGCTACGCATCTTGTCCATCAGCTCAGGGCCCAGGATGCCGTTGTGGAGGCGAAGGAAATCCTCCGTCTCGGTAGTGCTCGTCAGCGTGTCATCGGCGGTGACTATGCCTTCGGAGGCCAGGGAGGCGTGAGCGATGTGGAGGGTGGCG # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGTCCCCGCACCCGCGGGGGTAGTTC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGTCCCCGCACCCGCGGGGGTAGTTC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.30,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [33.3-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 505511-508715 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP046907.1 Streptomyces sp. SCUT-3 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ==================================== ================== 505511 28 100.0 33 ............................ GGGGCCGCGGTCGCGCAGGATGCTCCACGAGAC 505572 28 100.0 33 ............................ GGTGGACCCCCGGGGGCCGGGGGTGGGCATGGG 505633 28 100.0 33 ............................ GCGCGGCGCCGCCCACGACCGTCCGGAGTCCGG 505694 28 100.0 33 ............................ GGCTGAGCGATGACCCCACGCTGCGGGCCGAGC 505755 28 100.0 33 ............................ GCCACTGGTGGGGGGACATCGGGGGGTAGGGAA 505816 28 100.0 33 ............................ CCTGTTCCCCTGAGAGGGGGGAACGCCCGGGGA 505877 28 100.0 33 ............................ GGCGATCCTGGACTTCTACGGAGCCCCGATCGG 505938 28 100.0 33 ............................ GTTCCCCGGCCGCGGGTGGTGGTCCGGGCGCCC 505999 28 100.0 33 ............................ CTGCTGCGCAGTCTCCGGCATCGGTCCGCCAAG 506060 28 100.0 33 ............................ GATGAGCAGGTAGACGGTCCACAGCGGGACGAG 506121 28 100.0 33 ............................ GACGACCTGTGATGACGTGGCCTCCGCCGCGGC 506182 28 100.0 33 ............................ CGTGATCTTCGTGCTGACCGACGGGGCCGGATC 506243 28 100.0 33 ............................ GACCGGGTGGACCATCAACCAGGACGGCAGCGC 506304 28 100.0 33 ............................ GCCCCGCTGGAAGTCCCGCCTCCGCTGGGACGA 506365 28 100.0 33 ............................ GCTGGGCCCGGCGGCGGCGGCGATCTGCACCAG 506426 28 100.0 33 ............................ GCCGATGTCCGGGCCGTTCACGTTCGACCTGAT 506487 28 100.0 33 ............................ GGCGCGCAGGCTGCGGTAGGCGGTTCCCTTGTT 506548 28 100.0 33 ............................ TGTGCAAGCGCCGTGGAACCGGTCCGGCTTCCT 506609 28 100.0 33 ............................ ACCGGGAGGGGAGTCCGCATCCCTGCGCCCGGC 506670 28 100.0 33 ............................ TCCCCTGCTGCGGGGTGGTCTGCCTGCTGTGTA 506731 28 100.0 33 ............................ TTTCCGTACGGTGTCGTCGCGCGGCTTGAGGAC 506792 28 100.0 33 ............................ GCCCCGCACCGCCACGCATCGGCCGGCCACCAG 506853 28 100.0 33 ............................ GCACCTTCTGCGCGGTGGCCCGGGAGATCCCCC 506914 28 100.0 33 ............................ GCAGCAGGCCATCGAGACCGCCGCCCGCGCCGT 506975 28 100.0 34 ............................ ACGTCGCGGCCGCGGTGCCGAGCCCGGCCCCGGC 507037 28 100.0 33 ............................ GATGTCCGGCGCCTCGGACGCGGTCCGCGCGGC 507098 28 100.0 33 ............................ TGGTCAGGGCGCTGGCTACACTGACCGTGTTCT 507159 28 100.0 33 ............................ TGGGTAGTTGTTCGGCCCGGCGTAGCGGAGACC 507220 28 96.4 33 ...........T................ GGCCCTCGGCTACGGCGCACACTTCGTCAACGG 507281 28 100.0 33 ............................ GAACGACTCCGGCGCCATGGTCACCGGTACGAA 507342 28 100.0 33 ............................ GGGCTACCGGTCCGGAGGGTCCGGGGTGACGAT 507403 28 100.0 33 ............................ TCCCCCGGTCCGGACACCACCGGTGATCTCCTC 507464 27 96.4 33 .................-.......... CTACGGCCAGATCGGGTGGCGGTACGGGGCCAA 507524 28 100.0 33 ............................ CCGGCTCTGCGGAGTCCGGTCGAGGATGAGCGG 507585 28 100.0 33 ............................ GCTGCTCCCGCTCTACCAGGCCCCGGTGACCGG 507646 28 100.0 36 ............................ GAACGGCAAGCCGAGGAAGACCCCCCCCCCGCCCGG 507710 28 92.9 33 ........T............A...... GCTGACCGACGAGACCGGCCTCGTCCACCGCGT 507771 28 96.4 33 ........T................... CCTGTTCGGCGAGACGACACTGATGCTGCGCGG 507832 28 92.9 33 ........T........A.......... GTGATCACCGGCCAGGCGGGGACGGTGCCGCCC 507893 28 96.4 33 ........T................... GGTCGGACTCGCCCTGTCCACGGGGGTGATGGT 507954 28 89.3 33 ........T...........A...A... GACGGCGCAGCTCTGGCCGCGCTGGCACGGGCA 508015 28 96.4 33 ........T................... CTCCTCCCGCCGCGGCCCCCTGCGTTTCCAGGA 508076 28 96.4 33 ........T................... GCGGCAGCACCTGATGGTGGTGGGTGCGGTGGC 508137 28 89.3 33 ........T...T.G............. GGACGTTTACGACGCGGTGCGGCACCTGTGGCG 508198 28 96.4 33 ........T................... GCTGTCCCCGCTACCTCGCGCCACTGCGGCGCC 508259 28 96.4 33 ........T................... GTAGAGGTAGACCTCGGCCTTGCTGATCGTGGC 508320 28 96.4 33 ............A............... CCGGGTGGAGAACGCCGCCGCAACCGGCCGGGC 508381 28 100.0 33 ............................ TCCCTCCGCCTCCGGCCAGAGTTCCCGGGCTCT 508442 28 100.0 33 ............................ CTGCTCGCAGAGGAACACTGACCCATGGACCGC A [508459] 508504 28 100.0 33 ............................ GCCGTACGCGTTCTATGGTGGCCAGCACTTGAG 508565 28 96.4 32 .............T.............. GAGGTCACGCGATGAGCACCGTCCCTGGTTTC C [508592] 508626 28 100.0 33 ............................ TCGGTGATCTCCGGGGTGATCCCTGCCTCCTCG G [508643] 508688 28 96.4 0 ..............T............. | ========== ====== ====== ====== ============================ ==================================== ================== 53 28 98.6 33 GTCGTCCCCGCACCCGCGGGGGTAGTTC # Left flank : CCACCGGAAGCCGCCCCCACGCCAGACCGGCCTCCTTGACCGGTGCCGCCTCGGCATCGTCCAACGCCTGAAACGCGGGGCACGCCTTTCCGCAGTCGTGGATCCCGCAGACCCACATGAACCACGTACGCCCACGCCCGCCGCTGATCTCGTCAAGCCGACGCCGGAACGCGGACGACAAGTAGTGGTCCCACATCACCCCAGCCACGGCAGCCGTGTCCAGCAAGTGTCCGAGCAACAGGTGCGTCCGCCCCCGATTCCGTGCCGCAGACTTCCCCCACAACCGCGACACCCTGATGACGCTCTCTTCCGACAGCCCCATCACCCGCATCAGGTCGACAACCGACCGCCCATCCTCCACCGGCGTGGTTCTCCCTCCGTACAGTGGATCCGCACCATAGACCGCCCCACTGACAACACCCCTTGGTCACATGCCCAGACCGAAGACCCTGCCGAATGAAAACCGGCCCGCCTGTTAGCATCGCCGCAGGTCAAGAAGG # Right flank : CCTGATCCCGGGTGGCGTTCTTCCCGGCCTCCGGGTCACCCCTGCGCCCGCGAGGGTGACCCGGAGGCAGTCCGGGCGGCTTGCATGCGCACCGGTCGTCCTCGCACACGCAGGGTGGCCCCCAGGGCAGCTCGTAGACTGATCGGTAGCAGGAGTCGTTCTCGCGCGCAGGGATAGTTACCCACCGGGAGGCACCCGTGAAGATGCTGATCAACGTCCCCGAGACCGTGGTGGCCGACGCGCTGCGCGGGATGGCGGTGGCCCATCCGGAGCTGGCGGTGGACGTGGAGAACCGGGTGGTGGTGCGGCGGGACGCACCGGTGCCGGGGAAGGTGGCGCTGGTCTCGGGCGGCGGGTCGGGGCACGAGCCGCTGCACGCGGGGTTCGTCGGACGCGGGATGCTGGACGCGGCGTGCCCGGGCGAGGTGTTCACCTCGCCGGTGCCCGACCAGATGGTGCGGGCCGCGGCGGCCGTGGACAGCGGGCGGGGCGTGCTGTTC # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGTCCCCGCACCCGCGGGGGTAGTTC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGTCCCCGCACCCGCGGGGGTAGTTC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-18] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [38.3-25.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //