Array 1 752212-758012 **** Predicted by CRISPRDetect 2.4 *** >NC_011766.1 Desulfurococcus amylolyticus 1221n, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ======================== ====================================================== ================== 752212 24 100.0 43 ........................ GTCTCAGTAAATACTTCAATTGCTTCTTTTTCGTTATTGTCGC 752279 24 100.0 40 ........................ TTTCATAAAACTCTCTCACTAGTCGACGCACCAATGCGGA 752343 24 100.0 42 ........................ ATGATATAGTTGAATCCCAAACATGTTTTAACCGATATAGCG 752409 24 100.0 41 ........................ TAGAGTGAGTTCATAAGTAGTTTGGCAAATTGTCTGGTTAG 752474 24 100.0 54 ........................ TCAAATTTTGTCTCTATAAAAAGAATGAGGCGTCTATGGAATAAAGAATGGGGA 752552 24 100.0 44 ........................ TCAACCTTCTAAGGACGTCTATAACGTCCTTAGAGAGAGATACG 752620 24 100.0 37 ........................ TTTCCGATTTTCCTCACGAATATGAATTCGTCTTCAC 752681 24 100.0 43 ........................ GCTGTTTCATCGTCTACGCTTATGGCTTTTATTATTCTCTTTC 752748 24 100.0 36 ........................ TCTTGTATGCCTCTACAAGTAATCTCTCAGCTACAC 752808 24 100.0 42 ........................ GCCCGTGTGAGAGGCCCCGTAGATATATAGCCAGTGTAGCCA 752874 24 100.0 44 ........................ CACGTGTAATTATAAATGATTTACGCCGTTAAAGTTTTTTCAGC 752942 24 100.0 38 ........................ AACAATAGCCGTCCAAGGGGTGTGCTGAATATACCCGA 753004 24 100.0 43 ........................ TAAATAAAATCTAAACCGTATGAGGTGAGGTGTAAGTCTTGGC 753071 24 100.0 43 ........................ TATCGTAATTATAGTTTAGATGCTTGATTACCTGGCGGATTAT 753138 24 100.0 40 ........................ TTGTTATAACCCCCATCTCATACATACGTCTCAAATCCAC 753202 24 100.0 44 ........................ ATTAATGCTGACACGTTGTAGCCTTGCTCTTTCAATTTCCTCAT 753270 24 100.0 46 ........................ TCAGGGCGTTCCTCTACGCGTTTCTGCTGCAGGTAGCAACTGAGCG 753340 24 100.0 42 ........................ CATAACCTAGACCTCTTGTACCAACGAACCTTACCTTTATTT 753406 24 100.0 42 ........................ AGACGTGAAAAAAACGTTTTAAACTAGCTATCACTTACCTTG 753472 24 100.0 41 ........................ TTAAACGCGTTACCACTCAATGCGTTCCCGTCAGAGTGGCG 753537 24 100.0 40 ........................ CGCCTCCACGTTCATATCAACATTGTTGAACAGAGACTTG 753601 24 100.0 43 ........................ AAATTTAATACACGCGTTTTATAGTAATCGCTCGCTTTTTTTT 753668 24 100.0 43 ........................ CAGAATATTACAATTCACTTCTAGGTGAACGGGCGTGAGTAGG 753735 24 100.0 40 ........................ CGATCACGACAACTGTCTATAACACTACTACTACCACCCT 753799 24 100.0 37 ........................ TTATATCCGTAGTGAATATTCAAATGCATTGGCTTTC 753860 24 100.0 41 ........................ TAGACCTGCCTCGAGACAGTTATAGTTGTATAGACCCTGCC 753925 24 100.0 44 ........................ CTTATCCCATGAACGCATTTTACCTTACGCCCCTACGGTAAAGT 753993 24 100.0 44 ........................ TTTGTCAGCTGTGTGATCACTTCTGTTTTGCTGTTGATTTTCGT 754061 24 100.0 42 ........................ CTTCTGACTCGAGCTCGACTAACACGCTCTCACCTCGCTCTC 754127 24 100.0 43 ........................ ATCTTAGATATGACGTAGTACCTGTCCTTCTCCATCGTGTAGA 754194 24 100.0 44 ........................ ACTGCTTTCAACCCTCCCGTTAGGGTCTTTCACAGCTCTATATC 754262 24 100.0 44 ........................ TAGTATAGCGCCTTTCCTCAGGGCTACCAACTACCGCGTCCTCA 754330 24 100.0 44 ........................ TATACTACTGGATGATTTGAGTTATGTACTCAATCCACGGAGTC 754398 24 100.0 43 ........................ CTTAGTTGCACTATCTCATCATGATACCTGTCTACGTCTATCC 754465 24 100.0 46 ........................ CTGTGCTACAAATCTCCCCAGGGCCTCGAGTTTCCTCAACTTGGGC 754535 24 100.0 39 ........................ GAGGTTCACACTACCACCCTAGAAGGAGGCTATGTGTTG 754598 24 100.0 42 ........................ ACTACCGCATATTAACGTCATTGACACAGCCCGAAATACGTC 754664 24 100.0 42 ........................ AGGCAGACAGCGTGAGGCAGGCTAGCATGGAGGAGCTGAAGA 754730 24 100.0 41 ........................ TACTCTTTCCCCGACACCTTCGACAACTCGCTAACACTCAC 754795 24 100.0 40 ........................ TGAATACGAGGATCAGGATACCGGTGAGATACGTAGTGGA 754859 24 100.0 47 ........................ AAGACTACATCGTCTGACCCACTCCACGCTTTCAACAGCCAAGTGAA 754930 24 100.0 43 ........................ CAAGACTATTGGCCTCGGCATGAACTTCTTCAATTCATCGTCC 754997 24 100.0 42 ........................ CTATTGTGGGCGGGGTGATGTCCGCTACTTTAACTTCTTGAC 755063 24 100.0 42 ........................ TTGAAGCGACCGTGGTGTCGGGCGTAGCTGCGAGCACAGTGT 755129 24 100.0 45 ........................ GAGATAATAAAATGTTGGCATTTAGACTATCGCCTCGCTGAAAGC 755198 24 100.0 45 ........................ TCGACCATCTCAAATGCTGTCACGGGTTTCCTGGACACGTTTAAA 755267 24 100.0 43 ........................ CCAGCTATACCTAGCTTACCAAAGATGATTCGTGCTAATGGAT 755334 24 100.0 40 ........................ ATGGTATATAATGATCGGACATCAATCGACCCGTCGAATA 755398 24 100.0 42 ........................ TGCTCTTTAATACGGCTGAGGGAGTTGATGCAAATAGCTCAG 755464 24 100.0 44 ........................ CCAATGACGCTTGCCAGCGATCTACTCCTTGGGAATATCTGCAC 755532 24 100.0 41 ........................ CTCTACCTTGACCAACAAACTCACCTAATATTCTAATAATT 755597 24 100.0 45 ........................ CAATGTACTTATCCACTCTCAAGCATTCAAGCGTCGCATCACTAA 755666 24 100.0 44 ........................ TACTGTGCCACCCCCGCCTCCCCCAGTAGGCTCCCTGAGGTATA 755734 24 100.0 42 ........................ CAGGAACGGGGCTATGCTTTTCGCGTAGTGACAGATAAACAT 755800 24 100.0 45 ........................ ATCACACGTTATTAAATCATACGCCTTAGCTATCCATGGTGTATT 755869 24 100.0 42 ........................ TCTGACATATAGTGTTTTTGAAACAGGGGTGGTCGGGATGCG 755935 24 100.0 41 ........................ AAATCACAGAAAGTGTTTGTCTCCGACTTGAGACAGGTATG 756000 24 100.0 44 ........................ TCCTTAGATACATGTACATACCCTTAGCAACTACTTCTAAGATG 756068 24 100.0 42 ........................ CGGTTACTGCCGTAGAAGTGATAAGAGCAAGAACATAGTTGT 756134 24 100.0 40 ........................ GCTTAGACTTATCATCGATGAACGACAGATAAAACGCACA 756198 24 100.0 41 ........................ ACGCGACCTGGAGCGGCTGTAGAATACCGTGCTGTCTGATG 756263 24 100.0 42 ........................ TTGCAGTGTGGCGTATGTAGCACTTGACCTCGCTGGCTTCTG 756329 24 100.0 42 ........................ CCGCTAGCTAGCCTCAATTTACAGAGGTGGCCCGCGGAGCCC 756395 24 100.0 44 ........................ GTTGCCTCCGCCCGCTCACGGCTCATGCCCAGCGATGCGAGGTA 756463 24 100.0 41 ........................ GAGTACTCAGCTGGAGTGTCAGCGCCACGTAAGGACTGGGC 756528 24 100.0 40 ........................ CAGGACTTTCACCTGCAGTGTGTACACACATTTCATTGAA 756592 24 100.0 44 ........................ ATCAAGATAGCCCATTTGAGAAAGTTTTTCCTTGAATGTCTCTA 756660 24 100.0 40 ........................ ACACCAGCACCTGGCGGGGAAGAGGAGAAGGCCGAGCAGA 756724 24 100.0 42 ........................ TTTTCTTAACTTCATCAGCAAATACATAGTCCTTGGGTGCAT 756790 24 100.0 43 ........................ AATAATGTCTCCCGGTGATGGAAAATATTCGGTGACGGCTAGC 756857 24 100.0 41 ........................ GAGCGGAGCCGACAAAGCAGTACCTAAGATGAGTGAATTCG 756922 24 100.0 47 ........................ GACAGAGAAACTAAAAGAGATGAAGCTCGAGAAGGTGATCGCGTGGA 756993 24 100.0 47 ........................ GTAATTCCATATATCCGCTGGGTTTGTTGGTGTTATAGCAGTACTTA 757064 24 100.0 41 ........................ TTTAAAATGGATACTAGCACGGGTATAATGGAGTTTATAAC 757129 24 100.0 40 ........................ CAGGACTTTCACCTGCAGTGTGTACACACATTTCATTGAA 757193 24 100.0 40 ........................ TAATGCTACTTTCACGTAGTACTTCTCGAACACTTCTTTC 757257 24 100.0 44 ........................ AATATGACACTGCAATCGATTCGCGTGATGCACGTGCGCGGTGA 757325 24 100.0 41 ........................ ATAACCCCGGTTAGTGTACCAGTTACACTATTCATCCACGT 757390 24 100.0 42 ........................ CTGGTCAGACCGCAATGCTCTACGAGGAAGACAGTCGACTCA 757456 24 100.0 47 ........................ GACAGAGAAACTAAAAGAGATGAAGCTCGAGAAGGTGATCACGTGGA 757527 24 100.0 42 ........................ ATAACATATGCGGAGGGGTTGTGACATGAACCTGCGCTACAA 757593 24 100.0 45 ........................ AGGGATGGGTTGAGGGATGCAATCACGTGGTATGGTGCATGGTAT 757662 24 100.0 42 ........................ CTCTTTATTGTAAAACTGTTTACGTAGCGTTTTTTACACCGC 757728 24 100.0 41 ........................ ACTCGCATTGCTCATTAACATAGCTATTGGTATAACTCTGT 757793 24 100.0 41 ........................ CGCAGGTCATCAACAACTATCCTTGATGGTTTCATGTTGCT 757858 24 100.0 41 ........................ GTAGAATACCCGTACCCCCTCTCAATCACGCCGAACATTTG 757923 24 91.7 41 .....A...C.............. TTGCTCTAACCGTCTTCGGCACCACATTTATGTTCTTGAAC G [757935] 757989 23 83.3 0 ...-G.....AG............ | C [757998] ========== ====== ====== ====== ======================== ====================================================== ================== 88 24 99.7 42 GAATACAATAGAAAGAATTGAAAG # Left flank : CTCCGGAAGGTCCTGTCTGCTACACGAGGCCTTCAAGCCGTCGAAAGCCCTTCTAACACCACCTACGAGAGGCTTGCAGGAGACCACAAGGAGCCTGTCCAGCCTAGAAGCCCTCAACTGTATTAGCGCCCTGATCAAGATATCCTCATGGAAGCCCAGGGGAGACAAGAAGACTCTAGGCATGGGCAATAACCTAGAGTAAAAATATCCCAACCAGGCTTAAAAATCCCAAGCATGCCATGGGAATAAAAGAAAACTGAAGCAGGGAGACAGGATGATCACAACTGTCAATCAAGCCATCACAGAATTCAAGAACTAGAACAACATAAAACAACCCAGCAGACACAATCCCAGGATTCAAAGGGAATTCACCGAGCCAATACACGAGGCACGATCACTGATCAACCCAACATGACAACCATGAATCAACATCAACACAAAACATTTAAAAACCCAAGACACCAAAAGAATAAACATGAATACATCAAAGATCAAAAATA # Right flank : GTGAGCGTGAAGTCCGGCTACGAGCACGGCTACCGGGTTCCAGGGAGTCAGGGCATCGCGCCCTGGTCGGCGGCTAGCACGCGCAGACGTCTATGGTCAGGCGCTCTCCACAGGCCTTAAAAGCCTGGAGAACGCGGGCCCAGGCCGGGGAAAAATGGAGGAGCCGCCTAGGTGCGCCCGGTACTAGGTCTGATACTAGCCAGGCAGCTTGAGCAGGCTCGCAAACCCTATCTCCAGCAGCACCCTCACCAAGTCGCTGAAGCTCCTCGGAGCGGCGTCTTTGATTTGCACTATGGTGCCCTGCGGGAAGACGAGTATCTGCGGCCTCCTCATGTTCAGAGATTCCGAGTAGCCTAGCCCAAGCCTCTCAACCCTGATCTTCGGCGGCTTTGCTACTACGCCGTCCTTTAGACTACCGGGTAGACCGACGATCTCGCCGAGCCTGAAAGGAGTCTCGAAACAGACACCGGCCACTTTCTCAACGTTGAAAGCGCCCCCAA # Questionable array : NO Score: 9.24 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.00, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GAATACAATAGAAAGAATTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-33.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,0 Confidence: HIGH] # Array family : NA // Array 2 768270-768747 **** Predicted by CRISPRDetect 2.4 *** >NC_011766.1 Desulfurococcus amylolyticus 1221n, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ======================== ============================================= ================== 768270 24 100.0 43 ........................ TTAATCTACTTCGTCCTCCCGCTGGCAATGCTGGTGAGAATAT 768337 24 100.0 41 ........................ TAGATTTTATCCATGGGCCTTAAATCCAGTTGGCTGGGGCT 768402 24 100.0 39 ........................ ACATATGCCCGGGGCGGGGGCCTGATTCATTTTGAAGAA 768465 24 100.0 42 ........................ CATGTAATCACCCTCTATCATCACCAATAGAGGTTAATGAAA 768531 24 100.0 45 ........................ CTGTAGTTGTTTCGGGTACGGCTTCAAACAGTCCACTAGTAGCGT 768600 24 100.0 42 ........................ CAAGTCCGGCTTCGCGCCGATCTACGATGTCATAGGCAAGGT 768666 24 100.0 34 ........................ TAAAGAGTCTTCCTTTCCTAGCCATTCGACCAGC 768724 24 75.0 0 ......G.TG....A...C....A | ========== ====== ====== ====== ======================== ============================================= ================== 8 24 96.9 41 GAAGCAATAATGAAGAATTGAAAG # Left flank : CGCTTGACCTCTGAGTCCTCGTGGAGGACGTACCTCGCGTAGCTCCAGCTAGCCGGGTCCCCCCAGGGCTCTATCAATACCCTCATGAACACACCCAATAGTATGGTTTCGAACCGGGCAAAAATAAACCCAGCGCCATTAAAGGGCGAGCGCCCCTACCCAGCACCAGCCGCCTCCTCCTGGATGGGTGGAGGCAAAATCCCATGAAAGCCAAGGGAGAATATCCAATACTAACAGCCCCGCGAAACAGCCCGGCAAGAAGGGGCGACCAGGCGGCGATCGCACCGTAACGATAGCACACTACACTGTAACAGCACAATGACACTGTACTCCAATCGAGGAAGGGGACTCCCAGGCCAGTCATGGGAAACAGCCGGACAATACAGGAGACAAGGGGGGTGATCAGGCCCAAAGCGGGACCACAAGAGGCTAGATACCAACACAAGGACATGCTTAAATAGCCGGTCTAGTTTAAACAACTAAAACAGAGGCGAAAAACG # Right flank : ATTTTCGAGGTCAACTAGCTATAGAATTCTCACGGGTTTAGCTTAGGAAGCAGCCGTGAGGAGTTGAAGGTGTGGTGTGTTGGAGTGGGTTTGTGTGGTCACGTGAGTAGTACTCTGGCTACCTCGCTTAGCCAGGCCGCCTCTTTCTCCCAGGGCTTCAGTATCTTGAGCTCCCTGAGCGCCCTGTAGTCCTCCTCGCCGAGCTCTCCAGCGGCGGCGCGCCTCAGTATCCTCTCCACGTGGTCTGCGACCTTCAAGGGGATGACGGGGAGCTCGACTACTCTACCCATAGACTCGTGGATGTAGTAGAGCCTGTTCACCCCCATCAGCCCGGCGGCCAGCGCCAGGAACCCGGCCTCGGGCTTGAAGCCGCCGGTGAGGTTGAAAAGCACTTCGTCGGCCCACCCGGCCTCCCTGGAGACAGCCCTCTTGACCTCGGTGAGCAGGTTGACGAGGCCCTTCCCGAAGTCCCTGCCCAGCCAGGTCACCCTCACAGAGGA # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GAAGCAATAATGAAGAATTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.83%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [60.0-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0 Confidence: HIGH] # Array family : NA //