Array 1 152671-151319 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAEILV010000008.1 Chromobacterium haemolyticum strain ZR-1 NODE_8_length_247986_cov_146.781359, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 152670 28 100.0 33 ............................ TCCGGACTCGCGATGGGTGAACCGATACCGGGT 152609 28 100.0 32 ............................ TCCACGGCGCGCATATTCTTGTCGCGCAACGC 152549 28 100.0 32 ............................ AATGGCGCGGCGCTGGCGCGCGAGCACTACGC 152489 28 100.0 32 ............................ GCCCGGACAATCTCTATAACCTGGACCTGGAT 152429 28 100.0 32 ............................ CAGCCGCGAGAGTTCAAACAGAATAGACCTTC 152369 28 100.0 32 ............................ TTGCCGCCGGCCTCCAGGCACTCACGAACGAA 152309 28 100.0 32 ............................ TCCTGCTCGGACACCGCCGCCGCTCCGTCGCT 152249 28 100.0 32 ............................ ATCGCGTCGGGGTCGCCCTGGACTGTCAGCCT 152189 28 100.0 32 ............................ CTCCAGGCGTCCCACACCCGCAAGCAGTCCAT 152129 28 100.0 32 ............................ TGGTCACTTCAGGCAGTCTGGTGATGAATTCC 152069 28 100.0 32 ............................ AGACGTGACCTTTGAGGAGGTGCACGTTGACA 152009 28 100.0 32 ............................ ACGCTGTAGCGGTCGAACGACAACAGCAGGCG 151949 28 100.0 32 ............................ TCGCAGTTGAGCGTCCATTGGAAATTGCCGGC 151889 28 100.0 33 ............................ ATGTCCGCCGCCGACCTCTGGGACGACCGCGGG 151828 28 100.0 33 ............................ AGTCCGGCATGCGCTGAACCCAGAACTGGACAT 151767 28 100.0 32 ............................ ATGCTGTGCACTAGGTGGGGAGAAATCCATGG 151707 28 100.0 33 ............................ CATCCACCACATGGACACCGAAGGTGGAGAGGG 151646 28 100.0 32 ............................ AAGACAACCCGGGGAGGGGCCGGGACCAACAC 151586 28 100.0 32 ............................ ATCCGTGGCCCAGTACTCGCCTGCCACATCCA 151526 28 100.0 32 ............................ AGAGCGCCGGGCTCGCGCATCCGATCCTGCGT 151466 28 100.0 32 ............................ GCACCGATGATCTCGCCGCGGAGGCCAGACAA 151406 28 100.0 32 ............................ GGTCTGTTGGGATGCCTCGGCGTCTTCTCCTG 151346 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 23 28 100.0 32 GTTCTCTGCCGGATGGGCAGCTTAGAAA # Left flank : CATGCCGCCTTGCAGCGGCTGATGGCCGGCGACTGGCTCAGCGGCATGCGCGACCACATCGCGCTGGCCGCCATCCAGCCGGTGCCGCCGCAGGCGGAGGCCTGGCAGGTACGGCGCAAGCAGGCCAAGACCAATCCGGACAAGGAACGCCGCCGGCTGGTACGGCGGCTGGGCATCAGCGCGGAAGAGGCCGCGCAGCGCTTCCCGGACAGCGCCGCCCGCCGGCTGACCCTGCCTTTCCTCATCCTCAACAGCGCCAGCACCGGCCAGCGCTATCAGCTGCACATCGAACAGCGCCCGGCCCCGGCCACCCACGGCGGCCGCTTCAACGCCTTCGGCCTCAGCCCCGACGCCACCGTGCCGTGGTTCTAACCCTTTTTTCATGCCCCGCCGCCAAACCTGTTAAATCAAGGGCTTGGCGCGGGGTGCGAGAAAAGGGTTTTTATTGGGAAAAGCGATGCTTTCCCCCGCTGGCGCGGGTTTGCGGGGGAAAGGCTCTA # Right flank : TCTCAAGAGGTGAGTGGGGCCTGCCGGCTCTAGTTCACTGCCGGACAGGTAGTTCTCCACAACAAAATCAATGCTATATTAGGCATCTAAATTGACATTGACTAGGGAGAAATTATGGACTTGGTACTTGCCGATGTGGCCGTCAGCGTCACCGAGCTCAAGCGCAATTTTGCCGGCATCATGCGCGAGGCCGCAGGGCATCCGGTGGTGATCCTGAATCACAACCGCCCGGAGGCCTATCTTGTCCCTGCCGCCCAGTACGAACGCATGATGAGCCTGCTTGAAGACATTGAGGACACAAAGCTGGTGTTGGAACGTCGGCAGCAGCCCACTGTCAAGGTAGACCTGGATGAGCTATGAAATTGTCTTCCGGGTGGATGCGGAGAAGGAATGGCGAAAGTTGGACCCATCAATCCGACAGCAGTTTGCCAAGAAACTGAGAGAACGAGCCGAGCATCCGCACAACCCTGCCGCCAAGCTGCATGGCCTGGAAGGCTGCT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCTCTGCCGGATGGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCTCTGCCGGATGGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.40,-8.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [40.0-43.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.87 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 166471-162899 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAEILV010000008.1 Chromobacterium haemolyticum strain ZR-1 NODE_8_length_247986_cov_146.781359, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 166470 28 100.0 32 ............................ AAGCGGATGGCCGCCATCGACCCGCAGGCCGT 166410 28 100.0 32 ............................ TTCTGCTCGTACTCCACTTCCCCGCCGCACAC 166350 28 100.0 32 ............................ TGATCACCCAGGGTCCGCAGCTGATCGACTCC 166290 28 100.0 32 ............................ TCGTGAGCTTGTCACTGCGCCGCCAGCCCCGT 166230 28 100.0 32 ............................ GCTGCACAAATGGACAAAATCAGCGGCATGCT 166170 28 100.0 32 ............................ GGGTGGAACAGCGCCAGCATGCGATTTTCGTG 166110 28 100.0 32 ............................ CGGCGCGCGCGGTTGCTGGCCGCCTTGGCCGC 166050 28 100.0 32 ............................ AGAAGCAAATGCTCAATATTGACCCAACGGCA 165990 28 100.0 32 ............................ TAGCCGATGGTCCAGACGCCGGCCGGGCATTT 165930 28 100.0 32 ............................ GATCCCACCTTGACTCGATAGGTTCCATAGCG 165870 28 100.0 32 ............................ ATTCGACGGCACAGACGGTGCGCCATCCGAGG 165810 28 100.0 32 ............................ TGCACTTTCTTCCCGTTGTGATATGCACTCTT 165750 28 100.0 32 ............................ TGAGTCAGCCACCGTGGATCCGCATACCCAGC 165690 28 100.0 32 ............................ GTCAAGGATTCCTTGATAGTTCAGCAAGCGCC 165630 28 100.0 32 ............................ AAGATCCTGCGCGACTACGGCGTAGACATTTC 165570 28 100.0 32 ............................ ACCCATCGCCATCTTGGCCTGGACATTTTTCT 165510 28 100.0 32 ............................ CTCGCCTTGGGCGGGCTGACGGCGGGGGCGAT 165450 28 100.0 32 ............................ ACTGGGAACCCATTTTTGGATTTATGTCTGTG 165390 28 100.0 32 ............................ TGCTCATCCCTGTCCCTCCATCAAGCTTCCGA 165330 28 100.0 32 ............................ AGTCTCTGCGCTGACGCGCGCCTGGCGCAAAC 165270 28 100.0 32 ............................ AGATCTGGCCCGCAACCATTCCCGTTCCTTCC 165210 28 100.0 32 ............................ GAACCCACTCTATCTGGAAGGGTGCGACCGCG 165150 28 100.0 32 ............................ ATCACCCGCAAGCGAAAACAGTTGGGCATTCC 165090 28 100.0 32 ............................ GGCGACGATCGGGTTGGCCGCGAGTACGACAC 165030 28 100.0 32 ............................ TTGCCGCCGCTGACGCTGACAACGTGAATGAC 164970 28 100.0 32 ............................ AGCCAGTCGCCGAACCGCTCGCACGGCAGGAT 164910 28 100.0 32 ............................ AACTTGAGCGTGGCCGTCGAGTCCTTGCCGCC 164850 28 100.0 32 ............................ ATCCGGAGCGCAGCCAGGTATGCATTAACCGG 164790 28 100.0 32 ............................ TTCTTGAGTCCTAGTAGACCAAGAAGGCCGGG 164730 28 100.0 32 ............................ CGAGCGGGCGCAGGACTTGGCATATATCGCAA 164670 28 100.0 32 ............................ AGTCCCCGCGACGTTCGACGAACGGATTACGG 164610 28 100.0 32 ............................ TTGAATGCGGCCTTCTCGTGAAGCACATACCC 164550 28 100.0 32 ............................ AAGGATCGAAAGACCTGCCGATGGAGACATTG 164490 28 100.0 32 ............................ GACATCTTCACATCCTTAAAACCAAGTTAGGA 164430 28 100.0 32 ............................ TGGAAGCCGATCATGCCCTTGCAGAGGCTGAG 164370 28 100.0 32 ............................ ATCCCGTCGTCAGGATAGATGGCAATGCCGAG 164310 28 100.0 32 ............................ ATACCCTTCTACGTTGACGCCTGGATTCAAAT 164250 28 100.0 32 ............................ AGCGCCGCATCGGCAATTTGCAAGCGGTGCAA 164190 28 100.0 32 ............................ AGTCCAAGCAAAATGGTCGCAGCCAATACACT 164130 28 100.0 33 ............................ AGCAGGTTGCGCTGGACCCATTCGGAGAACTCA 164069 28 100.0 32 ............................ TTACCCAGCGCATATGATGATGCTTTTGATGG 164009 28 100.0 32 ............................ GAGAAGCGAAGACAAAGCCGGTGCGACAGACA 163949 28 100.0 32 ............................ ACAAATATAGCCCCTTCGCTACGGAGGAGCAG 163889 28 100.0 33 ............................ GATGCCAGTCGCTACGCTTTCAAGCGCAATCTT 163828 28 100.0 32 ............................ ACCCAGTCGCAGTCGTTCATCGCGTAGATCTT 163768 28 100.0 32 ............................ AGGTGATAGGGCCCAGCACCGGAAGGTAACCT 163708 28 100.0 32 ............................ GTTCTGCGTGTTGATGCCGGCGCTTGCCGGCA 163648 28 100.0 32 ............................ GCTGACCAGGTGCGTGACGAAGTCGTCGACCA 163588 28 100.0 33 ............................ ACGACGAGGCCATGAAGCACATCCCGGAAGCAC 163527 28 100.0 32 ............................ TGAGCGAAGAGTGCCAGCACTGCTTGAGTGCG 163467 28 100.0 32 ............................ TGAGCCAACGCCGGGGACGAGCTGCACCCGTA 163407 28 100.0 32 ............................ TTCCAGGTACAGAGGATTTGGCTTGATGCTGT G [163394] 163346 28 100.0 32 ............................ ATGTCGGCGCGAGTCACCGCGGCGAGGTCTAC 163286 28 100.0 32 ............................ AGGCTGATGCGGGTGCGCACGGCTTTGCCAGA 163226 28 100.0 32 ............................ TTGTGATATCGGAAGCCAGGACGGAAGACGTG 163166 28 100.0 32 ............................ AGCCGCAGCTGGAACTGAACGGTGTCGCTGTC 163106 28 100.0 32 ............................ TCATAAAAACCACCAGTCGTCTTTGAGTAAAG 163046 28 100.0 32 ............................ GGACTGCAACGGTACGGCGCGGCACAGGATAT 162986 28 100.0 32 ............................ TATTTCAAGAACGGCGGCGCAGTTTTCGAGAA 162926 28 92.9 0 ......................G....C | ========== ====== ====== ====== ============================ ================================= ================== 60 28 99.9 32 GTTCACTGCCGGATAGGCAGCTTAGAAA # Left flank : CTCCAGCTCATTGGCGCTGAACAAGGGCGTGCCGCCCCCGCCGCAAAAGCCCACCATCACCCCGGCCTTGGCCAGCTCCCGCATCGCCGCCTGCGTCACCGAAGTGCCGGTGCCCAGCAGGATGCAGCTGGTGTTGGCGATGGGGATATTCCAATACAACGAAGCCTTGCCGGCATCGGTGACGTACTCCACCCGCCCGCCGTTGACCAGCACCCGGCAGTGCTGCAGGTAATAAAGATTGGCGCGCTTGGAATGCAGAATGGTCTTGAGATCGGACGGGGAAAAATCGGACATGACGATACCTTCGGGATGGAACTCGATGGCATATTTTGCCATGGGCATGAACGGCATGGCAGCCTGCGCGACAAACCCTTTTTTTCCGCCCCCTGTGGCTGACATTTAAAAACAATGACTTAGCGATGGCATGGAAATTTGGGTCAAAGCCGGAAGAATCGCTGCAAATGCCCACGCCATAAGGACTGTGGGCGGTGTAGACTCTA # Right flank : ACCAAAGCGAGGCAATTCAACTCGCTATGCACACCCAATGTTCTGAAAGCGAGCGCAGCAAGAATCGGGTCGCCCACAGGGTCGCGCCGCCATAGACTTCGGACATTTCAATAATGCGAAGGAGAACGGCATGGCTTGGCAACTGGAAACCCTGGACCCGGCTTTCGTCGAACGGGCACGACACAAAGGGATTGATGCGCTTGGCCAAGCCGTGCGGCGGATGACGGCCGCCGGCGGCGAACCTTTCCGCGACGCGCTGCGTCGCGCCATCCCGGGCGAAGAGCTGATCCTGGCGAGCTACAGCCCATTCCACCAAGTCGGGCCATACCGCGAATATGGGCCGGTTTTCCTGGCGGCAGGGCCACAGCCAGAGCCCCCGCCCGAACTATCATCACTACTGCGCCGCGTCGGCAGCAATCCCTACCTCGGCGACCGCATGGCGCTGCGCGCTTACGACAAGGAACAGACCATGCTGGAAGCCGTGCTGCTGCCAACGCCTG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGGATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGGATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [48.3-45.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //