Array 1 101549-103301 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAIQYK010000008.1 Listeria monocytogenes strain UTK_C1-0006-E1 NODE_8_length_108131_cov_85.726091, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 101549 36 100.0 30 .................................... TGTTTTACTAACGATAATACGTACAATACT 101615 36 100.0 30 .................................... AGCATTACTAAATGTTATACCATTGGGCTC 101681 36 100.0 30 .................................... TTTTTTTGCATAAAAAAAGCCCTAACGGTG 101747 36 100.0 30 .................................... TTTACAGCTACAAAACGCCTGTAGCAGCTT 101813 36 100.0 30 .................................... TGACAGCAATAACCGCGTGATGATATTCTT 101879 36 100.0 30 .................................... CTGGTCCGACAGAGTCAAGTTGGAAATGTG 101945 36 100.0 30 .................................... TTTATAAGCGTCAGCAGATTGGTTAGTATC 102011 36 100.0 30 .................................... AATAACGGTAGATAAAATACGTCAGCGCTA 102077 36 100.0 30 .................................... AGGCGTGGAGTATCTTGCAAGACGTTCAGA 102143 36 100.0 30 .................................... TTCCAACTCTAATTTTGCAGTCGTTAGCCC 102209 36 100.0 30 .................................... AATGTTTACAATAAGTTGAAAGGAGAAGCG 102275 36 100.0 30 .................................... TCGTATATCAGATATTTAGCATATCCAACT 102341 36 100.0 30 .................................... AAAATTAGCTGGCAAAAATAATGTTAGCTA 102407 36 100.0 30 .................................... ACAAAACATACATATTAATCACTTCTAATT 102473 36 100.0 30 .................................... AATTGTTGCGGAGTCAATCAGGTAGTGGTT 102539 36 100.0 30 .................................... CAATTCTTGTTGTGACCCCGTTGCTTCTGC 102605 36 100.0 30 .................................... GGAGTATTTCGATAGCAGGGATGAGTGTGG 102671 36 100.0 30 .................................... TGGCAAATATTTAGTTGATGGCGTAAAAAT 102737 36 100.0 30 .................................... ACCCAACCAGTCTGGATGGTGGACTGCAAT 102803 36 100.0 30 .................................... AATCTTTTTCTTCGATTTTTGCTTGGTCAA 102869 36 100.0 30 .................................... ATTCTTTTAATAATTTGTAACCTTTCGTTG 102935 36 100.0 30 .................................... TAACGTAAACAATCCTGCACATTACACAGC 103001 36 100.0 30 .................................... ACCACTTACCAACCAGAAAGGCTTATGTTC 103067 36 100.0 30 .................................... TTATAAATTCTCCGCTATTGCAACTATTAC 103133 36 100.0 31 .................................... TCAGGCTTTCTATACTGGTTAAAACAAAGTA 103200 36 100.0 30 .................................... ACTATTTCGCTTGCTAACGCGGTTACATGT 103266 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== =============================== ================== 27 36 100.0 30 GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC # Left flank : GACAAATTAACCGCGACGATTAGCGAGTTGATAGGTTACGAATTATTGGAGCATGAACTGGATTTAGAAGAAGATGAAATAATGGTCATTGAATTATTCAAAGCTTTAGGAATAAAAATAGAAACAAAAAGCGATACCGTATTTGAGAAGTTAATTGAAATAGTACAAGTCTATAAATATCTATCTAAAAAGAAATTGTTAGTACTTATTAACGTGTGTTCCTATCTTACAGAGGAAGAACTGCTAGAGTTGAGACGGTATATCTCTTTATATCAAGTCAAAGTACTATTTATTGAACCTAGAAAAATAAAAGGATCTCCGCAAGTTACTTTAGATTCTGATTATTTTTTACATGTGGAAAATAGTGTATAAGGTAACCGCTGTTCTTTGAAAACAAAATAAATTTTATGTAAACCATAAAATAGCATTCAAAATTGAAATCTTGCTATGGATGAATGGCGCGATTACGGAATCTTGGAGGAAAGAAAAAATTCTGCGAG # Right flank : CTAATATTCTCCCCCCATGAAAAAAACCTCAATCATTTTTATTTTTTGCGCACTCCTGCTAACCGCGTGCTCAACCACTACAAAAGAAAGTCCTAGACAAACCACGGAAGCTACTGGCACAATTGAACAAGTAGAAACGGAAGCTATTTTAATCAAAAATTTCAAAATAAAAAACGATAATAACACGCCAGAACTGAGTGTGCGGTTCCACATCAGTGAAAAGTACCACGACGAAACGGGAAACAAAATAAAACGAACCGAACTAAACAAAAATGACAATATAAAAATCATTTTAACAAAAGACTTCCAAATCCAAGAAACCTCACCAGCCCAAATAGACCCAAAATACGTACAAAAAATCATCCTGCTAAACAAATAAAATTCTCTCGCCCACAGAGAGTTTTTTCTTTTCTCAAAAAAATAAACTCAAATTCCTTGCCTTGGTGTGAACTCCAGGGTTTATAATTCTATATGTAAAGAACGAAACGAGGTGATGGAGG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: F [matched GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-1.30,-0.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [56.7-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], // Array 1 134398-134949 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAIQYK010000004.1 Listeria monocytogenes strain UTK_C1-0006-E1 NODE_4_length_371996_cov_70.724375, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ======================== ========================================== ================== 134398 24 100.0 42 ........................ GGATTAATCAATTTAACTTCTCTGACTATAAATGACAACAAG 134464 24 100.0 42 ........................ AATTTGTCAAACTTAAACAAGCTGGATATTAGCAGAAACCAA 134530 24 100.0 42 ........................ GGATTAATCAACTTAACTTCTCTGGCTATAACTGGCAACAAG 134596 24 100.0 42 ........................ AATTTGTCAAACTTAAACAAGCTGGATATTAGAGTAAACCAA 134662 24 95.8 42 .......................C GGTCTAATTAGTTTAGTGGATTTGCATTTGTCTGTAAACCAG 134728 24 79.2 42 ....C....A.T...G.G...... GATTTAACTAATCTACGAAGTTTGGATATGGACCACAATCAA 134794 24 75.0 42 ....T...C.....CT.T.....C AATTTAACCAATTTAAAAAGGTTATCTCTGGTCAATAATCAA 134860 24 83.3 42 ......AG.A...C.......... GGATTAATCAATTTAACAGACCTAGAAATAAGGATAAATCAG 134926 24 70.8 0 G...AG...G.......A..A..C | ========== ====== ====== ====== ======================== ========================================== ================== 9 24 89.3 42 ATAAGTGATTTAAGTCCCTTGTCT # Left flank : GAGAGTATTTTCTTTTGGAAGCTTAGAATGGATATCTCTCAGATAGATGATACATTTTTTAGTTACTAACTATGAGAGAAAGAGGTAGATTACTAATGAAAGAAAAGAAATATCTCCAGCGACTATTCGTAGCATTAACCATCATCATAGGTATCAACGTATGGATAGGAAGCAGTGGAGAAACAGAGGTAAAGGCAGAAAGTATTACACAACCAACCCCCATTAATCAAGTGTTTCCAGACGCTAATCTAGCGGAATTTATACAGAGGGTATTACAAAAACCCAATGTGTCTGCGCCTGTTACACAAGACGAATTGAATTCAGTGGAGAATATAAGTGCTGATTCTGGGCTATATGACAATATAGCTTCTATAGAAGGCGTTCAATATTTAAATAATTTAACAGAATTGCGATTAGTGAGTTTGGATAATAGTGTAAGCGATTTGCGCCCTTTATCCGGCTTAATAAAGTTGGAGTTTATAAGTTTTTACCATAGCCAA # Right flank : CAGTTTAGCCAATTTAGAAATGTTGTATGTTAATTCGAATCAGATAAGTGATATTAGTTCGTTAAAAAATTTGAAAAATTTGGTGCTGTTTTCGGCACAAAGTCAAACAATAGTGAATAAACCAGTGAGCTATCAAAAGAATCTGGTTCTCTTGAATAATATCACAGATAGAACGGGGACGTTGGTATCTCCTTTTGGTATCAGTGATAATGGGGGCTATACTCCCCCCCATATTATATGGGATTTATCAGACTATAAGAAACAAGTGAGTTATACGTTTGACAACAGCGACATGGACTTTCCATTTTCTGGGACCGTCATTCAATCACTTATCGAAGTACCTGTGAGTTATAAGGTGGTATACGATGTGGAGGGGACGGAAACAAGTGAAACTGTTGCAAAGGATACCTTATTAACATCTCCAGCAAATCCAGTCAAAGAAGGGTATACCTTCACAGGTTGGTATGATGAGAAAACGGGCGGAATCGCATGGGATTTTG # Questionable array : NO Score: 2.53 # Score Detail : 1:0, 2:0, 3:0, 4:0.46, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.81, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATAAGTGATTTAAGTCCCTTGTCT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-22] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA // Array 1 283064-283805 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAIQYK010000001.1 Listeria monocytogenes strain UTK_C1-0006-E1 NODE_1_length_903972_cov_72.257283, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ===================================== ================== 283064 29 100.0 36 ............................. TTTAGAATGACATCCGGCTATGGACCGCGAACAGTG 283129 29 100.0 35 ............................. TTTCCTGAGCTGAGCGATACTCGTACCATATCGCT 283193 29 100.0 37 ............................. AGTTAAAAAGACAAGCTCTTTACTTGAGGATAGCAGC 283259 29 100.0 35 ............................. ATATATCCAAGGGCGAACGTTGGCATTTCTTTTAC 283323 29 100.0 35 ............................. TCTAGTTCAAATCTTTCAACTAATTTTTCTGACAT 283387 29 100.0 35 ............................. TCTGTAAAATCAAAAGTATCATAGAAACGATCTTC 283451 29 100.0 35 ............................. TTCGCCATGACGAAATCTAGCGCTTGTCCTACTAA 283515 29 100.0 37 ............................. AGAACAGGTGCTGGGTCAACTTGCCCTCCCATTTTTT 283581 29 100.0 35 ............................. TAAACAAGTGCTTCTGGCAATACCAACGTTCCATC 283645 29 96.6 37 A............................ TTGGTTCCTTTGGAAAACAACAATAACGTGTAGTATT 283711 29 75.9 36 ......T.C.A.C..CC....T....... GCAGAAACAGCAAAATAACCAAAAGTAATGACTTTC G [283734] 283777 29 79.3 0 ......A..T....AGA......A..... | ========== ====== ====== ====== ============================= ===================================== ================== 12 29 96.0 36 GTTTTAGTTACTTATTGTGAAATGTAAAT # Left flank : GCGTCCGTGCCACTACTTCAGCTGATATTTTACTTGAAAAAGGTGCCGTAGAAGTTATCGCTTGCGCAACCCACTCCGTCATGGCTGGAAACGCAACCGAACGCTTACAAAACTCCAATATCAAAGAAGTCATCACATCTGACTCCATCGATCTTCCAGAAGACAAGCAATTCGACAAACTAACAACCATTTCTATCGGACGAATCTTAGGCCGCGCAATCGAAGGCGTACAAGAAAACCGCTCGTTGCATCCGTTGTTTTAAAGAATAAGCAGAAAACAGTAACTTAGTAGAGTTGCTGTTTTTTTGTTATCTGTCGACCTCGAGTAGCGTGAAAAATACCGGGGATCGACAGAAAGTTGTAAGTGGTTGGGGTGGAAGAAGTTTGGCGGTATTTGCTTGGGGAAATCTTCCGGATAAGAGGAGATTTTAGATGTTTTTTGGTAGGTCGACAGAAATAGCTCTTTGAGGTAAGATGGGAGTAAGAAGAAAAGTTAGTGG # Right flank : TGAAAACCTGTTATACATATGATTATCTATTTCCGTTATAATTATTCCTTGCAAATAAATTCCCAAAAACAAACCCCTCATTAATTGGGTTTGTTTTTTTGTGAATAATTATAGTCAAACGAGCAATCTGTTAACAATTTAGCAATAAACGCAATAAAAAGCCGTTTTTTCACTATGGATTGTACTATAAAACATAATCTACCTATGCTAAAATTTAAGGGAAGGTAAGCTGAATAATACATATAAGGAGGACTCTACTATTGAAAAAGATTCTAGTGCCCATATTATTGTTAGCAACAATCTTAGCAAGCTGTTCCTCGCCGAATGAAAAAATAACCAAAGACACTAAAATATCCAAGACTATTACAATAAGAGCAGATTACAAAGTTCCAAAAGATATTAAAGAACTTGAGGATGATAGTGCTAATATTGTTAAAGTAAAATTTCTTCAAAATAAAACGATAGGCAAGGATGGTAGTACTATCAGCGAGATAGAAATT # Questionable array : NO Score: 6.06 # Score Detail : 1:0, 2:3, 3:0, 4:0.80, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGTTACTTATTGTGAAATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:79.31%AT] # Reference repeat match prediction: F [matched GTTTTAGTTACTTATTGTGAAATGTAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-1.20,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-15] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [58.3-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.27 Confidence: HIGH] # Array family : II-A [Matched known repeat from this family], // Array 2 298937-301370 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAIQYK010000001.1 Listeria monocytogenes strain UTK_C1-0006-E1 NODE_1_length_903972_cov_72.257283, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ====================================== ================== 298937 29 100.0 36 ............................. CATGCTCAATAAAGGGTAGAAAATGATTTGTTATCT 299002 29 100.0 37 ............................. TCGATCAAAGCGAATAATAATTGTATGCCCGCTTCAA 299068 29 100.0 35 ............................. AGGAAGGGCTACGCCGGACGTGTCAACGTGCATCT 299132 29 100.0 33 ............................. TTGAAATCATAGTTATTAAATTTAGAAATGCAC 299194 29 100.0 37 ............................. TAATGTTTCTCGTGCTGCAAGGGAATCTGGCTATACA 299260 29 100.0 37 ............................. TTGCTTCTGTCCGTACTCGAACTTGATATCCTTTTCC 299326 29 100.0 35 ............................. CAACCAGAAATGGATAATAGCGACACCGCAATAGC 299390 29 100.0 37 ............................. TGATTACTTTCCAACCGTTTTGCCGCGCCGCAGTGAT 299456 29 100.0 38 ............................. CTTTCCGAACCCCCAGCAAACGATGGATCATTTGTGTC 299523 29 100.0 37 ............................. TTTGTAGGTTCGTTTCCAAGCTTGACTACCTTTATCG 299589 29 100.0 36 ............................. GTCTTTGCATTTGATGATGATTACTTTTTTAAAGTC 299654 29 100.0 36 ............................. AAAAGAAGCTCTGTTACATCGTCTTTTTGGTCAATT 299719 29 100.0 35 ............................. TTAGGTCTTCCATTGCCATGTTTTCAACAAAAACA 299783 29 100.0 35 ............................. ACCCTTTGCAATAACTCTTTAGGCACCTTATCTGT 299847 29 100.0 37 ............................. AAATGACCACTACAGGTCACTTGAAATGGCATTATAC 299913 29 100.0 37 ............................. TAATACAAAATATTCATAACTCCTACATCATTATATA 299979 29 100.0 36 ............................. TTGCAAACCTAACTTATCTTTGTTTTTTTGCTTTTC 300044 29 100.0 36 ............................. TTTAACAGTCGTTGCCCAAGCGGTAGCTAATACCGC 300109 29 100.0 37 ............................. TTGGATTTTATTAAATACAGAGTCACGGATTGTATTT 300175 29 100.0 35 ............................. TTAGAGATAACGTTAGCATCCGTGATAACTTGGTT 300239 29 96.6 35 .........................G... TTTTGATTATATAGCCGACATCTACAAGAACTGGC 300303 29 100.0 36 ............................. CACGTACTTTAATCGGCATCAAACCACCTCGATTTC 300368 29 100.0 37 ............................. AGAAGTGGAATACGTTGGAGTGGTTAAATATGACACG 300434 29 100.0 37 ............................. TGCACTCAACAGTTCCGAGCATTACTGGTTTTTGAAC 300500 29 100.0 34 ............................. AAAAATTAAACGATACTTTGGTGTCTGTCTTTCG 300563 29 100.0 35 ............................. TACGATAATACGAGTTTTTCAATAGGCAGACCTCC 300627 29 100.0 37 ............................. TTAGAAGCGGGACAGAAAAGAACTTTTCAAGATGTGT 300693 29 100.0 36 ............................. CCGGACAAGTCCACTTTCATGGCTAGAGCCGCTTTC 300758 29 96.6 37 T............................ GTTATTAAAGGCTATATAGACAAGGTCTTAAGCGAAC 300824 29 100.0 36 ............................. TTGTTTATATGCACATAAATTTCGCGCATCCATAAC 300889 28 96.6 34 .....-....................... TTTATACGTATGAGTCCGTCATATCGCATATTTA 300951 29 100.0 36 ............................. AAAGGTAAAAATATTCTTGCTGTGGCAGGTCCTGAT 301016 29 100.0 38 ............................. CTCTTCCACTTTTGCTGCTTTTTCCGCATCTGGTACAA 301083 29 100.0 37 ............................. CAGTGATTATGCTAAGACCTACACAATCGTTATCACT 301149 29 100.0 35 ............................. GCATTTAATTGCAATAAACTTTGAATTGGGATTAA 301213 29 100.0 33 ............................. TAAGGTCATATAAGAAAAAATGTATTTTTTCCC 301275 29 100.0 37 ............................. AAAAACTATGCAATTAGCAAAGTGATTTTATGTAATT 301341 29 93.1 0 .......................A....C | C [301364] ========== ====== ====== ====== ============================= ====================================== ================== 38 29 99.5 36 GTTTTAACTACTTATTATGAAATGTAAAT # Left flank : CATTTAAAATTTGGTGGTGAAGATATGTATGTAATTTTAATTTATGATATTTCAATCGAAAATGGTGGAGCAAAAGTCTGGAGAAATGTATTTAAGATTTGTAAAAAGTACTTAACTCATGTTCAAAAATCAGTTTTTGAAGGTGAAATAACTCCAGCGCTTTTAGTTAAGTTAAGGATGGAGTTAGATAAGTATATTCGAGATGATCAAGATTCAGTAATTGTTTTTTCTAGTAGACAACAAAGATGGCTAGAAAAAGAATTTTGGGGATTAACGGATGAAAAGACTTCTAATTTCTTTTGATGTTCTCGGTCTGTCGACCTTTAGTAGTGCGAAAAATAGTGGGGTTCGACAGATTTAGGGAAATCATTGGGGGAGAAAGAGTTTGAAGTTTTTAAGCGAAAATCTGAAGGGATAAGTTATGATTTTTACGTAATTTTTAAGAGGTCGACAAAAATAGTGACCTGAGTTATGATGGGAGTAGGCGTAAAATAGAGCGG # Right flank : CGTCTTCTTAAAATTTAAACCCCAAAAATAAAAAAGGCCAGGACCTAAATCCAAGCCTTTTCCTACACTCCTCTAAACCAACAAAACCACAACCAACGCCAAAACCGCCGGCAAGCCCTGCTTCACTAAAATCCCCTTAGAAGAAGTCGCCCCTCCAAACAGCGCCGCCACAACCACACAACTCAAAAAGAAAATCTGCACAGTTTCAGCAAACCCTGCTCCCGCGAAAAACAATCCCCACACAAGTCCTGCCGCAAGAAAGCCATTATAAAGCCCTTGATTCGCAAATAGCGTCTGTACTTTCTTATTCGCAAGTAGTTCCTTCTCCACACCAAATGTCTTGGCTGCGAGTTTGGTATTGGCGAAAAACATTTCTAAAATCATTATATAAATATGCTCGATCATTACGATGAAGGTTAAAATAAATGCTAAAATGGCCATAAAAAATCCCTCTTTTCTACTTCGAAGTATAGCATAGCTTGTAAATTTTTCGTAAAAAT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAACTACTTATTATGAAATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:82.76%AT] # Reference repeat match prediction: F [matched GTTTTAACTACTTATTATGAAATGTAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [56.7-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0 Confidence: HIGH] # Array family : II-A [Matched known repeat from this family], //