Array 1 1013183-1014274 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_UHEP01000001.1 Streptococcus agalactiae strain NCTC8182, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence               	Insertion/Deletion
==========	======	======	======	====================================	==============================	==================
   1013183	    36	 100.0	    30	....................................	TAGAGTTGTTGTGACTGAGCTGGAACGTTT	
   1013249	    36	 100.0	    30	....................................	TGACATTTTAGATCTTGATATGTCTGTTTT	
   1013315	    36	 100.0	    30	....................................	GAAGGAATGGAAGACGAAAGAATGAAATTA	
   1013381	    36	 100.0	    30	....................................	AAGTAACCCAGTTTGTATCAAAGTAGTAAA	
   1013447	    36	 100.0	    30	....................................	CGCAGAGCTGTTTATTAACAATGATTGGAC	
   1013513	    36	 100.0	    30	....................................	TTATTATGTCCTGTCGCATGACAAAAAACT	
   1013579	    36	 100.0	    30	....................................	TCATGAAAGGTGCTATTAATGGTGTCATTG	
   1013645	    36	 100.0	    30	....................................	TGTGTGGATTCATTTTGTTTTTAATCGCTT	
   1013711	    36	 100.0	    30	....................................	TGACATTTTAGATCTTGATATGTCTGTTTT	
   1013777	    36	 100.0	    30	....................................	GAAGGAATGGAAGACGAAAGAATGAAATTA	
   1013843	    36	 100.0	    30	....................................	ATACCGACCCATACAAAAGTGATAACCGTA	
   1013909	    36	 100.0	    30	....................................	TGCTGAACGGGCTAAATCAGAGTCCGTTGA	
   1013975	    36	 100.0	    30	....................................	ATGAAGCAATCATTTTAGAAAGTATGCCTG	
   1014041	    36	 100.0	    30	....................................	TTGTTCTGCTTCGTAGTAGTAGTCTATTAT	
   1014107	    36	 100.0	    30	....................................	TTTTGATACGTATTTTCGTAGGGTGGATCA	
   1014173	    36	 100.0	    30	....................................	CAAAGCTTGGCAGGGTGTTGTCAACATGCT	
   1014239	    36	 100.0	     0	....................................	|                             	
==========	======	======	======	====================================	==============================	==================
        17	    36	 100.0	    30	GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	                              	       

# Left flank :   CGAAAAGCCAGAAGTGAAATCAATGGTAGAAAAATTAGCAGCTACTATTACAGAACTTATCGCATTTGAGTGTCTAGAGAATGAGCTTGATTTAGAATACGATGAAATCACGATTTTAGAACTCATTAAGGTACTAGGAGTCAAAATTGAGACACAGAGCGACACTATCTTTGAAAAATGTTTTGAAATTATACAAGTTTACAATTATTTAACGAAAAAGAATCTCTTGGTTTTTGTTAATAGCGGAGCTTATCTTACCAAAGATGAAGTTATAAAATTATGTGAATACATCAATTTAATGCAAAAGTCAGTACTCTTTCTAGAACCTAGAAGACTCTATGATTTACCGCAATATGTTATTGATAAGGATTATTTCTTGATAGGCGAAAATATGGTATAATATTAGTAAAAGCACAGTAATAACAAGGAATCATCGAAACTGAAGTCCTGCTGAGACGAATGGCGCGATTACTAAAGCTCAAAAGAAAATTTTCTACGAG
# Right flank :  CAGAGTTAACTAATTTTCATGCTATCACAAAGTTTTAGAGCTGTGCTGTTATTATGCTAGGGCACCATTGTGGTGTTCTAGTTTTTTGTTATACTGAAATAAATTTTCAGAGAATGTGGGGGAAGGCGGTAATTAGATTAATTCAAGACGTAATTTAGAACTTAGTTGGCCAAGCTAACGAAATCACCCCAGTTTATCAGTTTGATTGGGAAACTTATATATTGGCGACTAAAAAATATGGACGTCATTTAGAGGTGTGTCTATTAGTAGAAAATTCGAATTATTTTTCGGATTCAAAGAGAATGTGTCGATAGAAGAGATACGAAAGACTATAATTCCAACCTTATGGTTAAAGGGCTAAGTTGTTCTACGCTTTACTTAATTATTAGTTTGACAGCGTTGGTTCTTTTAGTGATTGCTGGTTGCAAGCTTACAAGGAAAGTAGTGGAGAACCTATCCATAATCAACTAACAGCTATGATGAATCTCACCTATTAATAT

# Questionable array : NO	 Score: 6.26
# 	Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:58.33%AT]
# 	Reference repeat match prediction:         F [matched GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-4.70,-0.20] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      NA [0-0] Score: 0/0.41
# 	AT richness analysis in flanks prediction: NA [58.3-66.7]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [4.87,0   Confidence: HIGH] 

# Array family : II-A/C [Matched known repeat from this family],   
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