Array 1 24205-23082 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACHTG010000002.1 Cetobacterium sp. 8H 000002F, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ============================================ ================== 24204 37 100.0 39 ..................................... AAGGTTTTTTTAAACTTCACAACAACTTGGTGTCCAGAT 24128 37 100.0 42 ..................................... TTATAGATAAAAAAAAAGAGAGGGTTTCCCCTCTCCTTATGG 24049 37 100.0 40 ..................................... GGAGTAACAGTTGGAGCAACAGTTGCTCCTGTTGGATTAG 23972 37 100.0 39 ..................................... AGATACTTAGTTGTTCCTGCATTTAATTGTTTAGTTGAG 23896 37 100.0 38 ..................................... ATTGACTTTTATATTAGATATCCAATACCCACCTATAT 23821 37 100.0 34 ..................................... CAAAGAATTGGAATTTTCCAATCTCGAAAACGTA 23750 37 100.0 41 ..................................... TCTAATAAATCCACTTTTGTTGATTTTTTCATTTGTAATAA 23672 37 100.0 43 ..................................... AGTAAACCTTTTGTAGATATACTTTTAGGAATGATTCCAATTA 23592 37 100.0 42 ..................................... ACCGATGCCATCAAAGCTCATTGTGAAAAAAACTTTTCTAAA 23513 37 100.0 41 ..................................... GAAGTGTTTAGGCACTTCAACAGCCTCAACAGGAGCAGGAG 23435 37 100.0 44 ..................................... TAGCTGAGTTCTTAGTAATTGCTCCAGCTTTGAAGTTAGATATG 23354 37 100.0 44 ..................................... TACAACAGCGTATACACAAGGGCTATATGAAAATATCAATCTAG 23273 37 97.3 39 ........................T............ TTTAAACCTTTTATTTGAATTAATCTTATTTTAGATAAA 23197 37 100.0 40 ..................................... GTCATCTTCCCTGCCTTGACCCAAGCACTTCTTAGGTCTA 23120 37 97.3 0 ........................T............ | T,A [23085,23087] ========== ====== ====== ====== ===================================== ============================================ ================== 15 37 99.6 40 GTTAACGAGTATATCCATATAAAACAAGGATTGCGAC # Left flank : ATTTAAAATCATATTTTTCTTTAGTAGTATTCTATTTTTTTCAAAAGTTGAAAATAATTCACCACTATCAAGACCTTCTCCTATCTCTTTAATTATAAATTCATAGTTTACTCCATCGATTTTAAAACTGTTTAATAATGCTTTAAAGTTACTATTTGTTAAATAAACTTTTTCCATATTTATCACTCCCATCTATTTCTTGATTACAAAGTAATAATAACATCTACCTCTTACAATTTTTTTTATATTTTTACAATTTTTATTCAAATATATAAAAATATGATATAATACTTATATATGAAAAGCATTACTCCTAGAAAGAGAACACTCTTAAAGTACTCTAATTCATCTCTAGCAGAGCTCTACAAAAACTTAAAAGTACAAAAAAGTCAAAAAAATATAGAAAAACATCTGTTTTTTTGCTTAAAAATACCCTATTTTAACTTAACATTTTATGTGCTATAATACTCATAGCTAGGTGATTTAGGTTAAATTTACGG # Right flank : TCCCTAAATTTGGGAGTTTTTTATTTTTTGTAATTTTTATGATTTTTTTGTAAGATCCATCCTTTAAAATATCTACATAATTAGCTAATTGGAAAAAAGATAATCCTTTTCTTTTAATAAAACCCTAGCAAGAGTTTTAAATTAAATATATTTTATAAAGGAGTGTGTATATGAAAAAATTATGGCTATTTTTTTTTATAATTCTTTGCTTTTCTAACTGTGGAAAATCGGCTCCTCAACTTAAAACAGATAAATATATGGATGTAAATAAAGTATCTCAAACTGGTCACGGCCGAACAGTTTGGGTATCGTCAGCTCAAATATCTGGAACTTATGGTGTACAATTTAATAATATTTTTGGAGAAAGCTTTTTAAAAACTATTGTTCAAGATGAACTATATAAAAGTGGTTTTAATGTTATGGAAAGAGCTGAACTAGAAGATGTTATAGAGGAACATATATTTTCAAAAACAATGACATCCACTCCACTATCTTCGAAT # Questionable array : NO Score: 3.24 # Score Detail : 1:0, 2:0, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTAACGAGTATATCCATATAAAACAAGGATTGCGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.86%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.00,-1.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [78.3-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.41 Confidence: LOW] # Array family : NA // Array 2 39864-39067 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACHTG010000002.1 Cetobacterium sp. 8H 000002F, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ============================================ ================== 39863 37 100.0 40 ..................................... TGGTAGAAGAGGCAGTAGTTGCAGAACAAGTAGTAGTTGT 39786 37 100.0 39 ..................................... TACCAGAGCAAACTGATATTAAAAAAATATCAATTTAAA 39710 37 100.0 37 ..................................... CAGGAGTTTTCACACCTGTAAAGTTTCTTTCGTTAAA 39636 37 100.0 39 ..................................... ACAGTTACAGGCGTATTTTCACCTGTATTTTTAATTGCA 39560 37 100.0 41 ..................................... ACCTAGAAATTTATCTAGGTCGTACCAATTATATCCTAGAT 39482 37 100.0 38 ..................................... CTAATATCCTTCACTGAAAGGTTATCCTCTCTGTGAAA 39407 37 100.0 37 ..................................... TCTTAATCCACCAACCCTTTTCTAATTTTATATTTTA 39333 37 100.0 40 ..................................... TCAGATATAACTTTTGTGTTTTTACTCTTTATCTCTTTAA 39256 37 100.0 44 ..................................... TTCCTGCAACAACACCCTTAGACCCAACTCTCATTTGACTCATA 39175 37 100.0 35 ..................................... TCAGTCTTAAAAAACTGCTCTACTGTGTCTTTATC 39103 37 83.8 0 ...............................CAATTT | ========== ====== ====== ====== ===================================== ============================================ ================== 11 37 98.5 39 GTTAAAGACTATATCCATATAAAACAAGGATTGTGAC # Left flank : TTTAAGATGAAATTTTTATTTAAAAGTATTTGATTCTTTTCATTGTCAGAAAATAATTGACTTTCATCAAATCCATTACCTATTTCAGTTATTATAAATTCATATTTTTCAGTATATCCTGTAAAAGTATTTAAGACTCTTTTATAATTACTATTTGTCAAATATACCTTTCCCATAATTCGTTCTCCTTTTATATATTTTCATTTCTAATATAATATACTTTTATACTATTACAATTTTTTTTATCTTCTTACAATTTTTAGTAAAATCAATAAAAATATGTTATAATAACTATATATAAAAAGCATTGTTCCTAGAAAAAGAACACCTTTGAAGTGCTTAGATTCATCTCTAGTAGACTTCTACAAAAACTTAAAATTACAAAAAAGTAAAAAAAACATAGTAAAATAGCTATTTTTTTGCCTAAAAATACCCTATTTTAACTTAGCATTTTATATGCTATAATACTCATAGCTAGAGAGTTTAGGTTAAAATTACGG # Right flank : ACTTCCACATTATGTGGGAGTTTTTTATTTTTTGTAATTTTTATGATTTTTTTGTAAGACCTCTCCTTTAAAATATAAATATATTTCAATTGGAGGTGATTACATGGATATCTATCTTACAGAATTCGGAAGTAAATTAAAAAAATCTGGGGAAGCATTTTGTATCATTAACTCTAAAGGTGAACATTATTTTTCTCCCAATCAAGTTGAATGTTTTGTTATTGAAGACAAAATATCAGTTTCATCTGATGCCCTACAATTAGCTATAACCAATGATATTCCAATTATTTTATCTGATAAATTAGGTAATGTTATTGGAAAAGTTTGGCAATACAAATTTGGTTCTAATGCCAAAATTAGAAGAAAACAATTAGAGTTTTTTCAAACAGAAGTTGGAAGTGAACTCGGAAAAGAGTGGATTATTAAAAAATTAAAACACCAAATTAACCATCTCGAAAAACTTTCCTCTATAAGAAAAATAACATCTTATTCAGAAGACA # Questionable array : NO Score: 3.19 # Score Detail : 1:0, 2:0, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTAAAGACTATATCCATATAAAACAAGGATTGTGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.27%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.00,-1.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [76.7-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.41 Confidence: LOW] # Array family : NA // Array 3 48880-47692 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACHTG010000002.1 Cetobacterium sp. 8H 000002F, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ================================================= ================== 48879 37 94.6 43 A.T.................................. GTAATTCACCCCATTAATTAAAAATCTTAAAAAAAGATTGACA 48799 37 100.0 46 ..................................... AAGACACGGTAAAATTAGTTGAACAACACAAACAAATATTGATAGA 48716 37 100.0 45 ..................................... TTGACATCAAAAGAAGTAGATGTACTGAGTTCTATAAATGACCAA 48634 37 100.0 46 ..................................... TTTTAGAAGTGGATAGACTAGAAAAAATTAAAAATATAAAAAATGA 48551 37 100.0 47 ..................................... CTTTATGAAGGAGGTATTAAAATGCTATTAAATAATGTAATTAGGAC 48467 37 100.0 43 ..................................... GAGATTCGGACGGAGTAGATTATACTGAGGAAGTAAGAATTTG 48387 37 100.0 45 ..................................... TTACAATAGTATGGTGTTAGTGGTAAGGAGTCCGAAATGGACTCT 48305 37 100.0 46 ..................................... ATTGAACAAGAAAGTTATTATACTAACGATAATGGATATGATTTAA 48222 37 100.0 44 ..................................... AAAAGTAAAGGTAAAAAGTATATTGTAAGTTTTAACGATACAAA 48141 37 100.0 47 ..................................... ATAATATACAACCATTACATAATAGGTTTTTAGTTAAAAAATTTAAA 48057 37 100.0 45 ..................................... AAGTACTGACTATTCAATTGAAATTAAATAAGGAAGGTGTGAAAA 47975 37 100.0 42 ..................................... GACATTATGAAAAAAGTATTAAAAATGTTATGGGACAACTTA 47896 37 100.0 49 ..................................... CTCTTATGAAAAATGACTTTGATGATAATAACTTTAATAACTTTAGTAG 47810 37 100.0 45 ..................................... CTTAGATATTAGTATGATTATACCCGATTTAAAAACAGCATTAAA 47728 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ================================================= ================== 15 37 99.6 45 GTCTCAATCCTTATTTTTACTGGATTATATCTCTTAT # Left flank : CAGAGTTAAACCCAAAGTATAATAGACTTGAGATGATTGATATTTTAAAGTTTTGTAACAAAGAGTTAATAAAAAAAAACTGTTATTGTGTTAATGAAATACTTTATTGTATTTTAGAAATAACTTTAAAAAATAATGGTATTGACGATAAAGTTTTGCAAGATCTTATTAACACAATCTCCATTCTTGATAACGTATCTATAATTAATTGCAACTTAAAGAAAATAACCTTAAACGTATTAAACTTAATACCATTAGAACAAAATGATCTAATCAACCTTAATGAGATTAGAAATAAAATTCTTCCATACTATTTTCAAAATATATGAAGAAAGAGAGGTTACGCCTCTCTTTTTTCATGCTTATTTTTATAGTTTAGAAGAGGATGAGTCAATTCTTCATAAATAGACTATCAATCTACTCATGACGAAAGATACACTAACTGTTTTTAACTAATTAAATAAATATAGCTTATACTATAACTCCTTTATTTATTTTAT # Right flank : CCCATTTTTGTTAGTTTTTCTTTATTTTCCTGGGCTTCTTTAAGAAATCCCTGCGCAAAATATATATGTTTTTTCCATTAATTTAACAATTTTTTTAGTTCTCTATCTTACTTTTTCCTTTGAATGCGCCGTTCTAACTTCTCTCTAATTAAAGCTTTTACTTTATCAAAACTATCTGCGCAACTTTTTTTAATTTTCCTCTTTACAAAACATAACTCAAGTTTATCATTTTATAACTTTTTTTTCAATTCTTTTATTTTTTTAAGAGGACCAGAGACTCCAGTCCTCTTCTATTCTTTCTACAATAATACTCTTAAATCTAATAACACCTTACTTTGCTCTTCACTTAACTTTTCTCCCTTTATAACAGCTCTACAAACATCAGAAATCTTAACTATAGCAGGAGTTCTATCAACTATCTTATCTAACTCACTTAAAACATAATCACCAGTTTCTTTTGAAACTCTATCTCTAGCCTCTCTTCTATCACATATCTCAGT # Questionable array : NO Score: 3.23 # Score Detail : 1:0, 2:0, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.00, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCAATCCTTATTTTTACTGGATTATATCTCTTAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.97%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-2.60,-3.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [65.0-85.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,0.64 Confidence: LOW] # Array family : NA //