Array 1 313910-314798 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_CAJETL010000002.1 Staphylococcus pseudintermedius isolate 18S03477-1, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence               	Insertion/Deletion
==========	======	======	======	====================================	==============================	==================
    313910	    36	 100.0	    29	....................................	TGAAGAGCAGAGAATAGCTTACATTGATT 	
    313975	    36	 100.0	    29	....................................	TTCTTGAAAGCTATTGAGCCATACGTTAC 	
    314040	    36	 100.0	    29	....................................	AGAGGTGGTAAATTGATTAAGTATCTAGC 	
    314105	    36	 100.0	    30	....................................	CAATTAGTGGTCGAGAACTTCATCAAGCAT	
    314171	    36	 100.0	    29	....................................	AATTTACTGAAAGCAGTGAGTAATATTGC 	
    314236	    36	 100.0	    30	....................................	ATCATTTCCGGCTTATTACCTTCGCTGATT	
    314302	    36	 100.0	    30	....................................	AATTGTTGGTGAATCCGAAGATGGAATGAC	
    314368	    36	  97.2	    29	.T..................................	GTAAAAATCGTTTTTGTCCTGTTTGTGCG 	
    314433	    36	  97.2	    30	.T..................................	CGGTAATTAGAATATTGGAGGGCGAGTGAA	
    314499	    36	  97.2	    29	.T..................................	ACGTGCTTTGAATACTTCTATGGGTAAAT 	
    314564	    36	  97.2	    30	.T..................................	CTAAACGATGACATGACTATGACATTAATC	
    314630	    36	  97.2	    30	.T..................................	TTCAATGGGTGTCTGAAGGCTTTAATCATA	
    314696	    36	  97.2	    30	.T..................................	GAATGGATTAATCCGCAAGCAGTGGACGCA	
    314762	    35	  83.3	     0	.T.......T................-.CA.C....	|                             	TC [314795]
==========	======	======	======	====================================	==============================	==================
        14	    36	  97.6	    30	GCTTTAGCACTATGTTTATTTAGAAAGAGGTAAAAC	                              	       

# Left flank :   TTTTAATTATATTATTTCCGGAATCACATCTTGGCATACACGATATTAAAAAGTTTATACACCTTATAAAGAGATATAAATTTACCACGATTATTTTTACTAATCATCCTTCTATCATTATTAACGAGGAAAACATATTTCTTTGTAAAAGTAATAAGAAGTGCCACGACATCGAAAAAATATATGAAGAATTAATGTTATTTGTTCCTGAAGAAGTAGTGAGTCATCAATTAGTTAACATGATTGCATATCACGAATTCGTTGGTGAAAACCTTTCCGAGTATGAGCGATATTTTAAGTTTATCAATCATTACAATTAGGCTATACTATATTTAACATTATATGATAGAGAAAAGTTGATCCAACGATGAAGTAATGACTATGTGACTTCATTCGTGATGAAGAGGGTTAACTTTATCATCGAGTATCATATCTGACTTCTTTTAATAGTGCCAAGCCTCAATTTTGAAAAGGATTGAGTCAATGTTTTTGGTTTTGAG
# Right flank :  CCTTCTTTATAATCGTACATCAACCTCACTATGCTTTCAAAATAATTAAGAGGCATTGTGGGCTTTTTGTGTTTATACGAAATGTTGTATGAATCTCTCAATCGTGCCACCATGTTATAATAGGTATAAATTGTTCATAAAAGATAAATAGAAAGTAGGGGAAATCTATGGAAGCAATTATTGCAACTCAACCGTTCCAATTAGCAGAAGGTCAAAAGTTTGAAAAAGTATCGCGTGAGCTCCCAACACCAGAGGCACATGATATTTTAATCAAAGTGTACGCAACAGGGATCAATCCGGTTGATACGAAAATGCGGCAAGCCCCGTTAAATGCTGAGGCACGTGTCCTAGGTTTTGATGCGGCAGGTGTGGTTGAAGCGGTCGGCGATGCGGTTACGGATTTCAAACCGGGTGACCGAGTATATTATTCAGGATCGAATCAACGAGATGGCTCAAATCAGACGTATCAGCTCGTGAATGAAAATTATTTAGCGCATATG

# Questionable array : NO	 Score: 5.99
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.85,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GCTTTAGCACTATGTTTATTTAGAAAGAGGTAAAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:73.53%AT]
# 	Reference repeat match prediction:         F [matched GTTTTAGCACTATGTTTATTTAGAAAGAGGTAAAAC with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  NA [-0.20,0.00] Score: 0/0.37
# 	Array degeneracy analysis prediction:      F [0-7] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [65.0-68.3]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [4.91,0   Confidence: HIGH] 

# Array family : II-C [Matched known repeat from this family],   
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