Array 1 11010-13473 **** Predicted by CRISPRDetect 2.4 *** >NZ_LGAS01000026.1 Lactobacillus delbrueckii subsp. indicus strain JCM 15610 contig00026, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ====================================================================================================================================================== ================== 11010 28 100.0 33 ............................ CAGGTAGCACGACACCATAGAGAGCCGCTGGGT 11071 28 100.0 33 ............................ TGTCCATTGACCGCTTAGCTTTAAGCTCTTCGA 11132 28 100.0 33 ............................ TTTAGATCGGTCAAGGGCCGGCCAATTTTAGGG 11193 28 100.0 33 ............................ TCAAAGGAAGGGGGGAAAATAAAAATGGATGTT 11254 28 100.0 33 ............................ AAGCACGATCGACAGCACGATCGACAGCACGAT 11315 28 100.0 33 ............................ TATCAAGCAAGCTTTGCCAATTTTAAGACTGTT 11376 28 100.0 33 ............................ TAATTGTATGTATTGTCGTACTTGTCCTCTAAG 11437 28 100.0 33 ............................ CGGGTTAATTCGCCGGAAATCCTGTATGGCGAA 11498 28 100.0 33 ............................ TTTATAAGCAAGTTTATTTATTTGCTTTAAGGG 11559 28 100.0 33 ............................ TTTTAACATTTTTGTTTACCTCTTTTTATCTAA 11620 28 100.0 33 ............................ TTAGAATGCAATTCGGGCGTCCTATTCTTGCTA 11681 28 100.0 33 ............................ TTACAGTCCATTTATTGTAGATTGAATCTACAG 11742 28 100.0 33 ............................ TCAACCCTATACGATCCAAGAGGAACATTTTTT 11803 28 100.0 33 ............................ TACCATCTACATCAGTTGCATCCATGATTGTTT 11864 28 100.0 33 ............................ TCCATAAAGCCGCTAAAAAAATGTTCCTCTTGG 11925 28 100.0 33 ............................ TCCTTGCCCGTAAGTATGTATGCGCAAAGGAAG 11986 28 100.0 33 ............................ TTCGCCATACAGGATTTCATCTGAGCTTTCACA 12047 28 100.0 33 ............................ TTAATATGGTGGACAACTACAAGGATTATAACG 12108 28 100.0 33 ............................ TCACCTCTACACTCACGCCTACCACTTTGCACG 12169 28 100.0 33 ............................ CTAAGCAAGAGGCGCCAAAGTAGTTGCCGTTTT 12230 28 100.0 33 ............................ CGGTTTATGGCAGCTATGTTGCCGAAATTGGCG 12291 28 100.0 33 ............................ TTGTCCTTGGCAAAGAGGGTCTTTGGTCGCAGG 12352 28 100.0 33 ............................ CTACCTGTTTACCGTTTCTTTCATAGGTCAGTT 12413 28 100.0 33 ............................ CCATGACGGTCAAAGAGTGGCGGGAAAATTATA 12474 28 100.0 33 ............................ CCCGTCCCCGTGAGCTAAATGAATTATTACAGA 12535 28 100.0 33 ............................ CGGGATTGACCGTCGGGTTGCTCAACTTGACGG 12596 28 100.0 33 ............................ TCTTGCTGAACAGCCGGGAGATGTTGATAAAAG 12657 28 100.0 33 ............................ TCAACAGTCCGCTGGGCGTGTGAAGGAAACTTT 12718 28 100.0 33 ............................ TTGCATCCGATGCTAATGCTTGCCATCACGTCA 12779 28 100.0 33 ............................ TGAGCGCCCCGCTGCTACATAGCGAATAGTTTC 12840 28 100.0 33 ............................ TTATCAGTCTGTGGTCAATGAAAATAGGGAACT 12901 28 100.0 33 ............................ CTGAGAGGTTTCGTTGACGCTGCAGCTTACAAG 12962 28 100.0 33 ............................ TCCCACATCCCCGGCCTGGGGGAGCGGGCGCTA 13023 28 92.9 33 ...G................A....... CAATGGTTAAGAGTGAGAGAAAAATGACTACCG 13084 28 100.0 33 ............................ TCCAGCTCATACAAGCCAGTGGTTAGCTCAATG 13145 28 100.0 33 ............................ TACGGCAGCCAAAGAAGTTTTGAAGGAAAACGG 13206 28 100.0 33 ............................ CTCCATTCGTCGATGAAAAGGGCGGCTTCCATT 13267 28 89.3 150 ..........A.T.G............. TGGGGGGCGTAGTACACCCCACTGTTATAGATCTATTTTACTTAATCGGCTGTGATCTCATTGCTATTAGTGAGTAACATGGGGCGAAACAATATTCCTCACGTATGTGAGGAGAATTCTTTCTTTATGCTATTGTGTTTTTCGTACTGT 13445 28 78.6 0 ...........AT.T.C....A.....A | T [13451] ========== ====== ====== ====== ============================ ====================================================================================================================================================== ================== 39 28 99.0 36 GTATTCCCCACGCAAGTGGGGGTGATCC # Left flank : GGACTGAATACGGAAAGTGATCAGATTTTGTCTATTGGCGCGGTGAAACACGATGGTACAGAATTCTACCGACTGATCAAGCAAGATATTGATGTGCCAAAACAGATAGTGGAGCTGACCGGGATAACTCCAGCAATGCTGGATAAGGAAGGCGTTCCACTGCAAGAGGTTTTGGGAGAACTAACTGACTTTGTTGGGGATGTGCCAATCGTTGGGTATAATTTTAGATTCGATTCTGCATTTTTGAATAGGGAATATCGGAAATGCGGGATGCAAGAATTAAAAAATGAGATCAAGGATTTGCTGCCAGTTGTAAAAAGAAAAGAAAAATTTCTGGACAACTATAAGCTACAGACTGTATTATCAAACTACGGGATCGAAAACAAGGTGCCGCATAATGCTGTGTCTGACGCAAGGGCTACGAAGGAGCTGGCGATGAAACTAATCAAAAATCGCATTTTGGTGATTTGAGAATGGCGTCGCTAAAGGGATCCATTACT # Right flank : ATAAGTTTCAGTTAAAGCACAAGCAAATTTCAAGGATCTTTGGTAGAGTAAAGGTAATAGAGAAGGAGTGAGGAACAAACATGAGCATTTACGGAAAGTATGCCGACTATCTTCCACAGATCCTGGATTCTGTTTTGCAGCAAATCCAAGGCATCGGTCAGGAATATAGCGCAAAACACGGGCAAAAGCTATATGAGCATCTGGAAGGTCGCGTCAAAGGCGAAGAAAGCATGACGCAAAAGTGCGAGAGAAAAGGCCTGCCGCTGATGCCAGAGTCTGCATTGATCGAAAATCGAGATGCGATCGGCCTCAGAATCGTCTGCAACTTTATTGACGATATCTACACTTGCATTGACTTGTTGAAGAAGCAGGACAACTTCAAGATCATTAATGAAAAAGACTACATTACCGATGCCAAGCCAAACGGCTACCGGTCATACCACTTGATCATGGAAGTAGTCACTCCCTTTGAAGACGTCCACGGCAATAAGCCTGGCACC # Questionable array : NO Score: 5.93 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:-0.27, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTCCCCACGCAAGTGGGGGTGATCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTATTCCCCACGCAAGTGGGGGTGATCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.30,-10.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-12] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [61.7-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //