Array 1 31036-33857 **** Predicted by CRISPRDetect 2.4 *** >NZ_QNUH01000002.1 Chryseobacterium elymi strain KCTC 22547 CONTIG_02, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 31036 46 85.1 30 A....-.T....AG..T......................A....... GCTAATTCATCTGGGAGCATTGTAGGCATA CC,C,T [31039,31044,31049] 31116 47 100.0 30 ............................................... GAAATTCCAGGTAATGGGTGATAACTGGGA 31193 47 100.0 30 ............................................... TCCAGAAGGGGATTTCTTTACTGTCTTGGT 31270 47 100.0 30 ............................................... CATTCTTTCGCAAAGATAAACAACCGTGAT 31347 47 100.0 30 ............................................... GCTTTTATCAGCTTTAAGTCTGTCCATGAA 31424 47 100.0 30 ............................................... CTTGCCACAGAATTTACATTCTTCAAATCT 31501 47 100.0 30 ............................................... CATGTACCTGTTAAGCCTTTAGTATTTGAT 31578 47 100.0 30 ............................................... CGGGAACCCATCAATACAGGACATACAATC 31655 47 100.0 30 ............................................... CAGAATATAAATAAACCTTATACTCCTCCG 31732 47 100.0 30 ............................................... ATAGCTGATTTAATATCAGAAATGCAACAT 31809 47 100.0 30 ............................................... TTATGTATATTTGCCAATATGGAAGCCAGC 31886 47 100.0 30 ............................................... ACTGGATCTGTTTTTAGACTTCGTAGATGC 31963 47 100.0 30 ............................................... TAAAATTAATGATGGGGAAATAATAACCGT 32040 47 100.0 30 ............................................... TGTTTAGAAATTTGGTAATAGTGTCCTGTA 32117 47 100.0 30 ............................................... GCCACCACGTTGAAGCCGCTTAACTCCATA 32194 47 100.0 30 ............................................... TTGGATCCGTGCAGGATCATTGCTTTTTCC 32271 47 100.0 30 ............................................... CTGTCTCAGATTCTTAATTGTAGACTCAAA 32348 47 100.0 30 ............................................... AGGAACGTAATCTAAAACCTCAATAGACCC 32425 47 100.0 30 ............................................... ATTTTTGGCGCTGCCGGGTTAATGATTTCG 32502 47 100.0 30 ............................................... CAAAGTGCTTCGCGTAAATCAAATTACTAC 32579 47 100.0 30 ............................................... TGCTGAACAGTTGGCGAAAACAGCAGTTCC 32656 47 100.0 30 ............................................... ACCTTACAAAAAGCTTCCATTGTCATTGTA 32733 47 100.0 30 ............................................... AGCTGTGGACTGGTCAAAGCCTAATGCACT 32810 47 100.0 30 ............................................... GGTGTTCCATCGTAATCTCCTGGATCTTTA 32887 47 100.0 30 ............................................... AAGAGTTATGCAGCTAATAAGTCTTTAGTA 32964 47 100.0 30 ............................................... AGCCAATTGGACAGCAACAGATACCTTGGC 33041 47 100.0 30 ............................................... ATATCCATGATGATTGACTTTCCATAGTAT 33118 47 100.0 30 ............................................... CAATACTCCATAGTTCGTTATTTGTTGTCA 33195 47 100.0 30 ............................................... AAGGTTGAAGACGTTGAAATGCCATTCCAG 33272 47 100.0 30 ............................................... ATCCAGCAATCGCATAACTATTCCAATCTC 33349 47 100.0 30 ............................................... GAGATAGTACCATTCAAATGGTGGGACGGA 33426 47 100.0 30 ............................................... CTCTCTCTGTTCTGAGCAGATACCAAAGCC 33503 47 100.0 30 ............................................... GATCTTATGGATGATTATAATCTTGTTAGG 33580 47 100.0 30 ............................................... ATTCCTCACTACATTTTATTGTGTATTGGG 33657 47 100.0 30 ............................................... TTCTTAGTAAGCTTTCTGAATTGATTATGT 33734 47 100.0 30 ............................................... TTATTAACTTTCGAAGCTTTTCCCGTCACG 33811 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ============================== ================== 37 47 99.6 30 GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGC # Left flank : GGTTTTTTATCTTTTTCTGTTACTGAAGCCGGATCTACTTTAATAGAATTCATATCGATTACAAAGTTTCCAGCAGTAAGCTGACCTTCTTCAACGCTTAAATCTCCTGATTTTACACTAAGTGTTCCCCAACGAGGAGCCATACCTCCTTTGTGGAAAGCTTTCCAGTTTACTACAGAAGTAGCAACATCAACTGCTAACACTTCTCCTTTACTTTCTGCCACTGTCTGCTCTGTTGCAATATCTGCTGACTTTTCTTTCGTACATGATGCTGCAAGTAATCCTATTCCTACCAATGCAATTACACTAAGTTTTTTCATATTGTTTATTTGTATTAAAAAAATTTAATTAAAATCTTAATTTCAAGTTCCAAAAATAGAAAAACCATATCAATTATCATCTTAACATACATCAAGAAAATAAAAATTTCTTTTTTATTGGCTATTGTAAAAATGAAACAGTTGAAAAAGGATATCCAAAATATTTCCCTCCACAGTAAA # Right flank : CTTCAAAATTTAATCCATTGATTATCAATGGATTTTATTATTATTTAGGATTTAAAAAACTAGAATAATTCGAGTTGTTGGAAGGTCGGCGGAGGTTCTTCTCTATTCCTGGCAAAGAAAATCTCAATATCTCCAAATTGCTTATCTGTAATAGACATGATGGCTACCTTACCTGCTTTAGGCAACATATTTTTAACTCTTTTGATATGGACTTTGGCATTTTCCCGACTTGGACAATGTCTTACATACATCGAAAACTGAAACAACGTAAATCCGTCATCCAGCAACCGTTTTCTAAACAAATTAGCATCACGCATATTCGCTTTGGTTTCGGTTGGTAAATCATACAGTACTAACACCCACATAATCCGGTATGCATTAAACCTTTCGGCATTCATAAGAATTCAGGATAAGAAATCAGACGTTTTTCTCCCGTATAACATTTATAAAGCGAGGAAGCAGTCGTTTTCACTGCCACCAATAATGGTCTCTTCTTATCA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.09%AT] # Reference repeat match prediction: F [matched GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-0.50,-2.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [65.0-83.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.64 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //