Array 1 6179-5350 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_SIXT01000049.1 Enterococcus faecalis strain 1MPF3 1MPF3_S6_L001_R1_001_contig_50, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                      	Spacer_Sequence              	Insertion/Deletion
==========	======	======	======	=====================================	=============================	==================
      6178	    37	 100.0	    29	.....................................	AAAAATTATTTTAGATAGTCTTATAAAGG	
      6112	    37	  97.3	    29	....................................G	ACATTAAGCAAAAACAACCCTTTGAGGAA	
      6046	    37	 100.0	    29	.....................................	AAAAGTTCTATTGATCGTTCAAGCGGTTC	
      5980	    37	  97.3	    29	....................................A	AATATTACAGAGCAAGAAGCACGTTCATT	
      5914	    37	  97.3	    29	....................................A	GAATCACTTGAATTATTTGTAGAATCAAT	
      5848	    37	  97.3	    29	....................................C	AGAAGAAAAAGAAGCTTTAGAGCCAACAT	
      5782	    37	 100.0	    29	.....................................	AATGCAGATTTTTATAACAAACACTACAA	
      5716	    37	 100.0	    29	.....................................	TTGAAATAAGCATAAAGCGGCGTCACTGC	
      5650	    37	  97.3	    29	....................................G	ACCACCAAAGTCATTTATCCATGCAGCAA	
      5584	    37	 100.0	    29	.....................................	CACACAGGAGGACAAGACAGACCCCCTGC	
      5518	    37	  97.3	    29	....................................A	GATACCCCTAAATTTCGTACGTCGACCCC	
      5452	    37	  97.3	    29	....................................C	CAAGTTGGTACGATTACTCAAAAATTAGA	
      5386	    37	  67.6	     0	......T..C.........A.A..ACAA..T.TC..C	|                            	
==========	======	======	======	=====================================	=============================	==================
        13	    37	  96.1	    29	GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAACT	                             	       

# Left flank :   TTAGAATGGTACCAAAACTACTAATAATGAAGATGATTATGTTAACC
# Right flank :  TCAAGCAATCCGTAATTTTCATCACAAGATTAGAATTTTTATCATCAAAGACGAGCTGCTTCGATTTTCGAAAACTAATCAAGTGATAAGTCAAAATGTTGATAGATTGAGATTAGTTCTTCCTTTTTTTAGGAAGGGCTTTTTTTATTGATAGAAGAAAGGGAAGAAATCTTGGGAGCACCTAAAAAAATTGTGAGAAATGCTTCTGTATTGTTTGGTTTCTGCCTCAGAAAGTTGTATACTTAGATTGGAATTATTCTATATTACATGCATTTTCACACTTTTTGGAAAAGTTCACTTGAATTTTCTTTTAGTTTCGTAGATAAAAGGAGTCATCGCTAATGGAAATGAACAATTCAGGTAAGCTTGTTTCTTTGTGTGGAGGCAAATCAGGGAGGAAATAATATGTTTGATATTGTAACATTGGCGAGAATCCAATTTGCGATGACAACAGTTTTCCACTTTTTCTTCGTACCGTTTTCAATAGGATTAGCACTTGT

# Questionable array : NO	 Score: 5.87
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.92, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.69,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAACT
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:66.67%AT]
# 	Reference repeat match prediction:         R [matched GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAACT with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  NA [0.00,0.00] Score: 0/0.37
# 	Array degeneracy analysis prediction:      NA [0-0] Score: 0/0.41
# 	AT richness analysis in flanks prediction: F [70.0-56.7]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.27,4.5   Confidence: HIGH] 

# Array family : II-A/C [Matched known repeat from this family],   
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