Array 1 1436-1208 **** Predicted by CRISPRDetect 2.4 *** >NZ_LCTF01000068.1 Caldivirga sp. MU80 contig_1057, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ========================= ============================================= ================== 1435 25 100.0 42 ......................... CTACACCTGGTTCATAGCAGGGTTAACAGCATCAGCAATACC 1368 25 100.0 41 ......................... CGACATTACGTATGCTAATGCGGTTGCGGTTAATGAGAAGG 1302 25 100.0 45 ......................... AATTCACCTGTATCTCTGAGGTAAACTAGGTCAACGCTTTCAGGG 1232 25 100.0 0 ......................... | ========== ====== ====== ====== ========================= ============================================= ================== 4 25 100.0 43 CCTTCAATTCTCTTTTGAGATCTTC # Left flank : CAAGCTGGTTAAGCGGATTCGCACGTTGGCGAAGAGAAGGGTTAT # Right flank : TGGTTCCTCTGCTTTTTTTTAGGTTTTTTAAGTTTTGTGGTTTATTTTAAACGGTGACCATTGGAACAGGGCTCCAGAGCTCATTCTATGGTTCATTCCTGTTCCAATGGTTTTGATGAGGAAATTGAATGGTTGTTCCAATTGAAAGGCAATGAAGGAATTGAAACAATGTTCCAATGATCCTAAGTCCAACGTAAAATGTAAGGATTGCATGAAACATGCAAAACAATGATAGGATAAATGAATCTAGAACCCCATGAAGTGAATGGATAAGAATGCATGAAACATGCAATTTAAACAGTTAAAATGCATGTGCCTTACTTAACTGCCCTTAGCCACACTTACGTGTAGTAGATTGTGAATGTATGCTTTAGCTTACATTGTCTTAACTCCTCGTGTTTAAGTGGTCAATGATGCCTAACCAAGATACTGAACTTTAATAGTAGCAGTGCCCTACTCTTAGTGTGTTACAATTAACTTAAGTGTGCTTTAGCTTACCA # Questionable array : NO Score: 2.86 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCTTCAATTCTCTTTTGAGATCTTC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-3.10,-3.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [68.3-36.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.37 Confidence: LOW] # Array family : NA // Array 1 71663-70026 **** Predicted by CRISPRDetect 2.4 *** >NZ_LCTF01000007.1 Caldivirga sp. MU80 contig_9, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ========================= ================================================ ================== 71662 25 100.0 47 ......................... TTCTTTGCCCTTGAGGATTATGCGAAGGGTTTCCTGGAGAGTATCGT 71590 25 100.0 40 ......................... AAATAGAGGTTCGGTTATTTTCACAGTTATTTTAATTGGT 71525 25 100.0 44 ......................... TTCCTATCCCCATCCATAATACCTACTAACTCACCTTTTGATAC 71456 25 100.0 47 ......................... TCCTGATTGCTTCACCCAGTGGGCTACCCTGAATAACATTCAACTCG 71384 25 100.0 39 ......................... TGCAGTTGATTGAGTAGCTTATCGCCGTTGATGCTTTGG 71320 25 100.0 46 ......................... CACCTCCACCTGCCGCAGGTGGCTTAGCGGGTGGTTGGGCTACAAT 71249 25 100.0 42 ......................... ACGCAACTCCCTCTCCATCCTCCTACCAGGCTTAACACCAAT 71182 25 100.0 39 ......................... CCAGGACTCGTTGACAAGGTACCTGAGTAACTACCTGGG 71118 25 100.0 41 ......................... CCTACTCCCACTACTGCCCGCTATACTTCACGTGACAGGTA 71052 25 100.0 40 ......................... TCGGGTAACAAGCATGGTATTGCCTTTTTCAGTAACTCTA 70987 25 100.0 42 ......................... CAGTACACTGTCCGCTACGCATCAACTAGGCAACTACAATGC 70920 25 100.0 48 ......................... CCTGGTTGCGCATCTACGAGGATGCGTTCATCAAGAATGCGCTTGAAA 70847 25 100.0 44 ......................... TAGCGTTTGTTCAATGCCCTGCCCAGGCTTGGTTACAATGTTTA 70778 25 100.0 39 ......................... CATGAAATGAGTGAATTAGTAACAGGTAGCCGCTGTGAC 70714 25 100.0 31 ......................... ACTATTTATGGCGACGCAAACCCAAACCCAG Deletion [70659] 70658 25 100.0 37 ......................... GCGATTAACCTAACCACAAGGCTGACGTCGTGGATAG 70596 25 100.0 43 ......................... ATGGTTCTTTTATGCCCCCATCAATGCATCCGCATTTAGTAAT 70528 25 100.0 43 ......................... CTGCTACTACACCGTAGCCAGTAGCGGAGTAACCTGGAACTGC 70460 25 100.0 41 ......................... ACATTCACATCTTACCTTACCCTTAGGCCTAGGGCCTGTTA 70394 25 100.0 46 ......................... AGATTCTCCAGGTTGGCTAACGCCTTATCGGCAGGCGTCTGTGGTT 70323 25 100.0 41 ......................... CATATGGTACATTCAGCCATCATACGGCAGCGGCTTCACGA 70257 25 100.0 43 ......................... AATTGAGAAAAATGGTACTGATAGGATGGCACGTGCGTGGAGG 70189 25 96.0 43 ..A...................... TCGGAAATAATATTTGACGTTAAGCGTGGTAGGTGGGATATGT 70121 25 100.0 46 ......................... GGCACCCCACTCGCAGGGGAGGTTACGAATGAGGTCGTGAACCAGG 70050 25 92.0 0 ............G...........A | ========== ====== ====== ====== ========================= ================================================ ================== 25 25 99.5 42 GAGGATCTCAAAAGAGAATTGAAGG # Left flank : ATGGTTAGCTAGGGTGCGCCTGAAGGCACAGTGAATGCTCTGTAGGGTAGGATTCCTCACTCAGGGGTAACGCGTCCTCATTGAGAATTATTGGAACCCACACCACGAGGTGTTTAGGCGATGATACCTGAGGCATACACCTAAGGTATGTTGCATGTAGATACGGCCAAAAACAACTAGGCAAGTTACCATGCATTTTAACTGTTTAAAATGCATGTTTCATGCGTTTCTGCTATTTGGTTCATGCTTCTTTGTGTTCATCTGCTTCATCGTTACTTTTGCATGTTTCATGCATTCTCCTCATTTTACATTGGACTTAGAACCATTGGAACACTATTTCAATTCCTCCATCACCTTTCAATTGGAACAACCATTCAATCCCACCATAAACACCATTGGAACACGGATGACTCATCCAATGAACCCCAGAACCCTGTTCCAATGACCACCATTCAAAATAAACAACAAAACTTAAAAACCCTAAAAAACCAAAACAACCG # Right flank : AGGGTTAACACCTTGGTGTGAGGGAAGAATTTATCAATGGTGCTTAGGGTGACGTAGTGATGATAATTAGGGTTGCCACCAGGGGTTCGGCCCTATCGATTAGGCAGGCCGAAATAGTGATGAGGAGGATACTTGAGTTTAACCCAGACGTTGAGTTCAAGCTAGTTATAGTTAGAACTACGGGTGATGTTGTACTGGATAAGCCACTTTACGAGATAGGTGTTAAGGGTATCTTTGAGAAGGAGGTTAACCTAGCCTTACTTAGGGGTGAGGCCGACGTAGCTGTGCATAGTCTCAAGGATATGCCAGCCCAGATAAGCAGCGAATTAACCCTTGCAATGACTCCACCTAGGGATGATCCGAGGGATGCCGTGGTCTCTGTGAGGGGTTACACGATTGATTCACTGCCAAGCAACTCGGTGGTGGGTACCTCAAGTCTCAGGAGGAGGGGGTTCCTGCTCTCAATTAGGCGTGACGTAGTGGTTAAGCCCATTAGGGGT # Questionable array : NO Score: 3.23 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GAGGATCTCAAAAGAGAATTGAAGG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.60,-3.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [55.0-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.68 Confidence: LOW] # Array family : NA //