Array 1 30410-28168 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAKDV010000013.1 Streptococcus sp. ZJ1593 Scaffold12_1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ==================================== ================== 30409 33 100.0 34 ................................. CTTTAAAGCAAGCATCGACTTTGATATCCAATCG 30342 33 97.0 32 ................................G TTTTGAGATAAACAGTGTTTTCGTCACTTCGC 30277 33 100.0 33 ................................. GTGAAAGTAAAAACGCTTTAATTAAAGCTACAG 30211 33 97.0 33 ................................G ACAGCAACCATCATACTAGGTTTATCAACTACA 30145 33 97.0 32 ................................T AAAGACATTTTTTTACTCCTTTTTTATGTCAT 30080 33 97.0 33 ................................T CGTCCTCCCTAGGCTTTTTGCTATAAGTCTTAT 30014 33 97.0 36 ................................C AGCACGCGATTGCCAAGCCTGTGGACAGCGAAGGTC 29945 33 100.0 32 ................................. GGATCTGCTAAAATTTTTAATTTTATTTTTTT 29880 33 100.0 33 ................................. CCAAAATATCGAGTCCGTAGCCTTGTTTAGCTA 29814 33 100.0 34 ................................. CTTTTGCGAAAACTTAAGAGACACCGAAGGTTAC 29747 33 97.0 36 ................................G TCACGGTCATCCAGGAGATTTTGCATAAGCACATCG 29678 33 100.0 34 ................................. ACAACTGGCTAAAAAGCAAACAGACCCTATGCTT 29611 33 100.0 33 ................................. GGTCCACTTTTACAGGTTGTTGAACTCGCTGTC 29545 33 100.0 35 ................................. CCAGTAGGAGATACAGCGTATAACCGTTACGGTGC 29477 33 97.0 33 ................................T GACGTTTCTCCACGCTTTTGTCTTATAAAACTT 29411 33 97.0 35 ................................T GTCGCTCTATAAACAAACATATTATCCGCTCCTGT 29343 33 97.0 35 ................................C TGGGCATAATAATATCCGTAACGGGTATGACAATC 29275 33 97.0 34 ................................C AGATGAGAGTTATCCTAAGCCGCCCGTCGGAGTT 29208 33 97.0 33 ................................C AAAACACGATGAAATTCGGCGGCTTTGGTAACA 29142 33 100.0 35 ................................. ACACGCGATTGCCAAGCCTGTGGACAGCGAAGGTC 29074 33 100.0 34 ................................. TACAATTTAGTGTCTTTGATACTACCAAAAATCC 29007 33 100.0 36 ................................. TTTTATAATATAAAAAAAAACAAAGGGAAGTAAAAA 28938 33 97.0 33 ................................C AAATGAGAGTTATCCTAAGCCGCCCGTCGGAGT 28872 33 97.0 35 ................................T TGTAAATGGCCGACACCATTGTTGTTGCTGTTACG 28804 33 100.0 36 ................................. TAGTCTCCATCTGTGCCTTTTTTGTAGCCCAAGATA 28735 33 100.0 32 ................................. AGGTCAAAATAGAGTTAGGCACTGTATCTACA 28670 33 100.0 35 ................................. AGGTGACAAGTGTCGAGAGCGACCCAATCGCAACT 28602 33 97.0 34 ................................C TGTTGATCCTCTGTCGCTTGGGCAATAGAAGGGA 28535 33 97.0 34 ................................C TTTTGGGTTAGGCCAGCTTCTAAACGTAGGGCTT 28468 33 93.9 33 ...........T....................T ATCAAAAAGATTATGAGCAGGCGCTTTTAAAAG 28402 33 93.9 33 ........T..T..................... TAATAAGACATCAGGTCTATGGGAGCTTCTGCA 28336 33 97.0 34 ...........T..................... GAGTTTGAGGGATGTTTTTGTTACGTTAGATTTA 28269 33 93.9 34 .......T........................C CATAGCAAGGCTCAAAGCGTTATTGAAGAATTTT 28202 33 87.9 0 .....G..............C.A.........T | A,T [28192,28195] ========== ====== ====== ====== ================================= ==================================== ================== 34 33 97.7 34 GTCGCACCCCACACGGGTGCGTGGATTGAAATA # Left flank : TAAAGCAATTCGTGGGGAATTGGAATCCTATCCGCCATTCTTAATTTAGGAGTCAGTTTATGATGGTTTTAGTGACTTATGATGTGAATACAGAGACTGCTGCAGGCAGGAAACGTCTCCGTCACGTTGCGAAGCTCTGTGTCGATTATGGTCAGCGCGTGCAGCATTCAGTCTTTGAATGTTCTGTGACACCGGCTGAATTTGTCGAAATAAAAAATAAACTGTTGACAATCATTGACCAAGAATCAGATAGTATACGATTTTATCTTCTTGGCAAAAATTGGCAAAATCGTGTAGAAACTCTTGGTCGAAACGACAGTTATGACCCTGATGCGGGGATATTACTTTTATAAAAACTTGAGTGCGAACCTAGGTTGCACATCAAAACCTAGGACACTCGCGCACAAAAATACAGAACTGAGTGGCAAAAAGTGTTTTTTACTGATAAAATACCATCAGTGACTAATAACATTTAGCCCCAAACGGTGCAACTACGCGCC # Right flank : TGGTGGCGGGATCATTTACAAGTGCACGGCTTCGTTGTCCCCCTACCTCAAAAAACAGTCTATGTTCCACCAGATCCTTAACAGAAAAATACGGTATTTAGCCGTATTTTTTGCTATAATGATGGCAAAAAATAGAGGGAGAGCATGGATGACACAGAATAAACAGGCTTGGATGATTTCGGTTAAACTTGGAAAGGGCTGTTATCGTCATTTGCAGGTTCCCAAGACGACGACTTTAGAGGATTTGGCGGAGATTATTTTACAAGTTTTTGACTTCTATAATGATCATGCTCACGCTTTCTTTATGGATAATCGTGTGTGGAGCGATGATGCCTATTACTTGACTGCTGTTGATTTAGACTAAGAATTTCTGCATACAGAGGATTATAACCTAGAGGTTTTGAGTCTGAGGCAAAAGTTCAAATTTCTTTTTGACTTCGGAGACTCTTGGGAGTTTGACTGTCAGGTTTTACGTGAAGTGAGCGATGACGGGGAGGTCT # Questionable array : NO Score: 5.73 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.58, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACCCCACACGGGTGCGTGGATTGAAATA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: R [6,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCACCCCTCGCGGGTGCGTGGATTGAAATA with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-9.00,-5.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [10-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [50.0-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,9.78 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //