Array 1 665165-665493 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACGFZ010000002.1 Enterobacter hormaechei strain CF4 NODE_2_length_882034_cov_52.443210, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 665165 28 100.0 32 ............................ CAGCCCAAAAGTGAACATCTTCGCAAAATACT 665225 28 100.0 32 ............................ GTAATCCAAAAAGCGGCGACATGTAGTCACGA 665285 28 100.0 33 ............................ CTGCTGAATATCAGTGTTTCCTGCAATCATCAC 665346 28 100.0 32 ............................ ATATTTGCCACTGTTTCAGGCTGCTTTCCTTC 665406 28 100.0 32 ............................ TCTATCAATTACCACGCTCGAAATACGAGGAG 665466 28 71.4 0 ............A.......TAGGCTC. | ========== ====== ====== ====== ============================ ================================= ================== 6 28 95.2 32 GTTCACTGCCGTGCAGGCAGCTTAGAAA # Left flank : GTTTTCGCTATGTATGCAGCCACGGTTTGTTTCATGGTTGTCCATCTCCTTTATGTGATATCGCTTACAAGCTTAGAAGAAAGTGACTGTATTGCCTGCACAATACCCCTCAATTAAAAGTGGTTTTCCTGCGCGCGTATTCAGCATGATCTGGTTATCGACTGGATGAAAACAGATTTTATTTCAACGGATTATGTGTTTTTTGAACGCTATTAATGAAAAGCTATAGCACGACGATTTTGGCAAACTCTTTTTACCCCTTGCCTTCGGCGGGCTGATGCTGGCGTTTTCAGGGGCAGGGCGGTTTGCGCGGGGAAAGGCCCGGCGGGGAAGAGAGAGTTGGATGCTGGAATGCAGGAAGGGGACCGCGGACCCTTTTTTATTGGTGGATTTTAAGTGGTTGATTTTATTGTACTAGATGGTAAGTGGTAAAAAAGGGTTTTTGAGAGATTTTTAGGGGAATTCTTTATCTGACAAGGTGATAGGTGTAGATTGTTCTG # Right flank : AACGTAGGCCGGGTAAACGTAGTGCCACCCGGCAAAAAAGCCCGGTGGCGCTGACGCTTACCGGGCCTACAGGGGTTCGAAAGGCAATTGAGCTGGCCTGCACGGGCAAAAAAGCCCGGTGGCGCTGACGCTTACCGGGCCTACAGGGGTTCGAAAGGCAAATGAGCTGGCCTGCACGGGCAAAAAAAGCCCGGTGGCGCTGACGCTTACCGGGCCTACAGGGGTTCGAAAGGCAATTGAGCTGGCCTGCACGGGCAAAAAAAGCCCGGTAGCGCTCACGCTTACCGGGCCTGCGGAAGAACAGCGACAGTTTATGCCAGAACAAGATCGCCCTGTGGATGGCATGAACACGCCAGCACATAACCCTCTGCAATTTCGGCGTCGGTCAGCGTCATGGTGCTGGTGACCGTATATTCACCGGAAACCACTTTGGTCTTACAGCAACCGCACACCCCGGCACGACAGGCCGCCACCACCGGTACGTTGTTGCTTTCCAGCGC # Questionable array : NO Score: 6.02 # Score Detail : 1:0, 2:3, 3:0, 4:0.76, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTGCAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGTGCAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [65.0-38.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 680760-681567 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACGFZ010000002.1 Enterobacter hormaechei strain CF4 NODE_2_length_882034_cov_52.443210, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 680760 28 100.0 32 ............................ GGGTGCATTGTTCGTAGTGGTTTCATTGTCCA 680820 28 100.0 32 ............................ AGAGGAAACGGTCGCGCCGTCAATCCACCCCT 680880 28 100.0 32 ............................ AGATGAATCATACGACGGATAGTTGGTTCCGC 680940 28 100.0 32 ............................ AGCTTACGGAATCGTGGCGGATAACATCACTT 681000 28 100.0 32 ............................ GCGCGACTTCGCATAGAGTGCGCCAGGCGAAT 681060 28 100.0 32 ............................ AAGCCACTCAACGGCTTCTTTCGTGTGGTCGT 681120 28 100.0 32 ............................ TGGTGAGTAGTGCGTCCTGCTGATGGCTTAAA 681180 28 100.0 32 ............................ GCTGACGCAGAACCGTATTACCAGCGACAGCG 681240 28 100.0 32 ............................ TATCGCCGATAGTAGACGGGGCGCTGGCGTTC 681300 28 100.0 32 ............................ AGCGATGGGACAGCGGCTAAAAGTGTGATCAC 681360 28 100.0 32 ............................ CTCATCTGGCCCAGCATACGGCGGGCGATACG 681420 28 100.0 32 ............................ TACATCCTGACGCATCCATTCCCTTGCAGCTT 681480 28 100.0 32 ............................ CTGACTGGCTGCCGCTGGCGCAGGAGGGCAAA 681540 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 14 28 100.0 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : TCCGCAAACGCAGCCCATTTGCCGTTGTCTCGGTGCTTATCTGGACGTAGTCAAAACCGAACTCGCAGAATCAATGTGTGACTTTCAGGTGGTTGAATTTGACGATGAGGCGGAACGGCCAAAAGGAAAAGAATGGCTTCTGGAAGATACCGAAACCAAGTGCGATTACTGCCAGGCATTAAACCACGTGCTGCGGGTGTCGCATTTTGACCGCGAGATGCTGCCCCATCTGACCGGATTGCTGCATGACATTACACATTCGATGGCGGCAGATGTGGCTGCACCTGAATGTGGAAAGCCTGCAATTCATATCATTAATTGACCAGTGGTGTAGCGCGTCGGGGGAGGGACTCCGGCGCGGTATGGCGAAACCCTTTTTTCGAGTGGTTCTTTAAGTTATTGATTTTTATTGTGCGAATAAAGGCCGCAGAAAAAAGGGTTTGAGGTAGATATGTTGATTATTTTCTTTTCGAACAATAAGATGGCGAAGAATTGTTTCA # Right flank : ATGTATGAGGAGGCTCTTAGCTCCGTTGCACGGCGAACACCAGGCGTTAAGCGAACTCGAATCGCTGGCATGGCGAAAGGGTCTGAACGATTACTGTCTGTGTACGGCAATTCAAGCCGTGCCAGAGGTCAATCACTGGCGATGCGTATCCCGTGTTCAGGTGAAAAGCAGCGCGCCGCGGCTTATGCGTCGTTCGGTAAAGAAAGGATGGATAACCGAAGAAGAGGCGCAGCAAAGGATACGCACAATGGAGGAAGCGAGGACGGATTTGCCCTGGCTCAATTTGCGTAGCCTCTCGACAGGTCAGTCTTTCAGGCTTTTTATCCGTCATGGTGAGTTGCTTTCCGCACCTGTGGTTGGGATGTTTTCAACCTACGGACTAAGCGGCACAGCGACAGTGCCCTGGTTCTGATAAATCACAACCGCATCCGCTTTCAGGGTGCGGTTTTTTCTGCGAGACGGGTATCAAAATTAAAAGGCAGTAATTCAACAGAATTAAG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [70.0-45.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.51,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 3 683154-683600 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACGFZ010000002.1 Enterobacter hormaechei strain CF4 NODE_2_length_882034_cov_52.443210, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 683154 28 100.0 32 ............................ ACACTGTAGGATCGTCTGCTGATACGCTAATA 683214 28 100.0 32 ............................ TTAAACGCCGCGTCAGGCTTGTCGATTGCCTC 683274 28 100.0 32 ............................ AGATTTCGTTCAGCTCTGGGTAGTTCACCATC 683334 28 100.0 32 ............................ TCGCGCATTGATTGGCGATGCGTGAGCGGAAA 683394 28 100.0 32 ............................ GCAGGTACGGCACGGACTTCAAGCGCCACCAC 683454 28 100.0 32 ............................ AGTCTGTTAACTTCTGCCAGTCCCCGCCGCTG 683514 28 100.0 32 ............................ TCATCGAGTGTGAGGCTGTGTGATTTTATTGT 683574 27 71.4 0 ......CA.......AC..A.AC.-... | ========== ====== ====== ====== ============================ ================================ ================== 8 28 96.4 32 GTGCACTGCCGTACAGGCAGCTTAGAAA # Left flank : ACGCGCCACACGTTCGCTCTCGTCGGGCGTCAGCGTCCGGCCCGTACTTTTGCGGCGGGCAACGTTACGCTCGTTGATTCCCATAACGCGTAAAATCTCCGCTTTCGACATGTCCGTCCACTCGTGAATATTGTCGAGGACGCTGACGGGTAATCCTTGATTGAGATATTCAATCAACCGCATGCCTCTGCTTGCAGGTAAACCGGCGTAGCGCCAAAGCGTGTTATCAGCCGGCCTTTGCGCAGGAACCCATGTTCTCATGATACCTCCAGAGTGATGTCATTTGTCATGGTTAAGTATAGTCATTTGTCATGAGATAGGGAACGGGTGTTTTTTTGTTCAGGGTGGGATAAAAGAAGGATGGTATTTGACCCTAATTTTTGACCAAAATGTAATATATTGATTTTTCGCTTAAAGATCCGGGGGAGCAAAAAAGGGTTTGAGCAGGGATTTTAGCTTTTTTTGTATGAAAATCATGATGGTGGGAAGGTAATATTACA # Right flank : AGCCGAAACTAAACCCAACCAACCGTTCAAATAATCGACTGTCCTGAAAAAAAAATAAGGCCGGGAAAATCCCGGCCTTATTTAATATTCATCTGCCATTACAGGCGAAAACAATTAGCGACTACGGAAGACAATGCGGCCTTTGCTCAGGTCGTACGGGGTCAGTTCAACAGTCACTTTGTCGCCCGTCAAAATGCGGATATAGTTTTTGCGCATTTTACCGGAGATGTGCGCAGTTACCACGTGACCGTTTTCCAGTTCTACGCGAAACATGGTATTAGGCAACGTATCAAGTACGGTACCCTGCATTTCAATATTGTCTTCTTTGGCCATCTAATCCTCTGGGGTATCACTACCAAGTTTTGAACCGGCAAGATAATGCCGAAATTCCTCAATTAAGTAAAGAATTGCGCGTTTAAAACGCAGCAAAACAGTCTCAGCGTATTGCCCAAGCGTCACGGTACAACCGAACAGAAAGCGCATTCGTAAAGGGGAGACGA # Questionable array : NO Score: 6.08 # Score Detail : 1:0, 2:3, 3:0, 4:0.82, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //