Array 1 4874-7002 **** Predicted by CRISPRDetect 2.4 *** >NZ_ORYE01000331.1 Xanthomonas fragariae strain CFBP 5257 isolate CFBP 5257, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 4874 28 100.0 32 ............................ AGACGGTACAACTGCATACGCTAGAGGTATAG 4934 28 100.0 33 ............................ GTCATCGTGACAACCGAATACCGTGGTGTCTTC 4995 28 100.0 32 ............................ TTACGGTCATGTCCTGGATATGGTGTCCAGGA 5055 28 100.0 32 ............................ TTTCAGATCCCTCGCCTGGGTGGCCTACTCGT 5115 28 100.0 32 ............................ GTCCATGCGGCCGGCAGCCAACAGGCTGCGAA 5175 28 100.0 32 ............................ TATGTCGCTGAGGGGTGATCCATACCTAACCC 5235 28 100.0 32 ............................ CTGGCTGCAACCGCTACTCCGTAATAACTAGG 5295 28 100.0 32 ............................ ACCAGGTCCCGGCCCTTCTGGGAGTTCACTGC 5355 28 100.0 32 ............................ AATGAGCAATAACTTTTGCGCTAGTGTTCATC 5415 28 100.0 32 ............................ ACATTATCTTTTCCGCGAATCAAAAGCTTAAT 5475 28 100.0 32 ............................ TTCCGGGGCAATCCCTTTACGCCTTCTTGGCC 5535 28 100.0 32 ............................ ACCAAACGAACTGGTCCAGGCTAGGATCCGTT 5595 28 100.0 32 ............................ TTCTGGGACCACACAACCTCGCCTGCGTGCAC 5655 28 100.0 32 ............................ GTTCAGGGCAGGCGAAAGGTCTCAGCGCTGCA 5715 28 100.0 32 ............................ GCATCGACCCAATGGCCGCCCTTGCCAGGCTC 5775 28 100.0 32 ............................ TGCAGATGCGCGCGACGAATATCGGACGTGTC 5835 28 100.0 32 ............................ AAACATGCGGGGATCAGCACGGCCATCGGTTC 5895 28 100.0 32 ............................ CGTAGCCGGGAACTCAGCCAACTGTGCTTGCA 5955 28 100.0 32 ............................ GATTTCACTGATTGATCTGGACACTGTGCAGC 6015 28 100.0 32 ............................ TCGAAGTAGGCATAAAGCACGTTGGGCAGCCG 6075 28 100.0 32 ............................ CAGACAAGCCAGACGCCGACCCACTGATAGTC 6135 28 100.0 32 ............................ CGTCGTTTCGCGTCGTCCACCGCAGCCAAGGT 6195 28 100.0 32 ............................ ACCAACGACGGGTGTCGCGCGCACCTGGGTAG 6255 28 100.0 32 ............................ ACCTACGAGCCCCAGCCGTATGCAGAGGTTTC 6315 28 100.0 32 ............................ CATTAGGCTGCACAGTGTCCAGATCAATCAGT 6375 28 100.0 32 ............................ AGCCGCACCCTTGCAGACTGTACTCTCTGCAT 6435 28 100.0 32 ............................ TCCACGTCCTCTTGAACAACATGTTCAGGGAG 6495 28 100.0 32 ............................ TGCAGCAGGGGGAGGAACTTCCGTATCAAGAC 6555 28 100.0 32 ............................ TGTAGGAGCAGACGGGGACAATACGCAAGCAG 6615 28 100.0 32 ............................ TTTGCGCCACACCGAAACCGAATTCCGCGACA 6675 28 100.0 32 ............................ TAAGCAGCGCGTTAAGAATACATTCGTGACCT 6735 28 100.0 32 ............................ TAGATGCCCTGATTGCAGAAGTCAGGACCTCT 6795 28 100.0 32 ............................ TCTATGGGGAAATCATTTTCGAAAAGTACATC 6855 28 100.0 32 ............................ TCCCAGGGCAGTCGGTGTCGCACCTTGCTTCG 6915 28 100.0 32 ............................ TTAAACCAAAACTCATGCCAGTCGTAGCGACT 6975 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 36 28 100.0 32 GTTCACTGCCGCGTAGGCAGCTCAGAAA # Left flank : TTGCAGATGTTGATGGCGAGACCCTGGCTGCACGGGATGCTCGATCACCTGGCGGTATCGGCCATTCTCGCTGCCCCTGCCGACACCCAACATCGGCACGTCACCAGGGTGCAGGCCAAGAGCAGTCCCTCGCGCCTGCGCCGTCGTGCCATGCGCCGTCATGGGATCGATGCAGAGACAGCCGCCCAACGCATCCCGGATGCGGCAGCCGAACAGCTGCCACTGCCGTTCGTCGTACTGGGCAGCCGCAGCACGGGACAGGCGTCATTCCCGCTGTTCATCCGTCACGGCCCCCTGCTATCGGAGCCGACGAACGGCAGCTTCAACAGCTATGGCCTGAGCCAGGAAGCGACCGTGCCCTGGTTTTGACCCTTTTTCCCGGACAGAACAAAGGCTGCTTTAGAATCAACCACTTGGCAGGCACCTTGTTTCAAAGGGTGCCTGCCCTGTTTTGTCGGTATTTCTTTTATTTATCAATGGATTGATGAAGATCTGATCTT # Right flank : AATTCAAGGATGGCCATACGGGTTGGATTGACGTTTGATACGCCCAGGGTTCCGTAGACCCTCAAGACCCTCGTTGCGCGTAGCGCCGTTCAAACTCTACAGGGGACAGGTCGCCAGTTGAACCGTGGCGGCGGTTGGGGTTGTAGAACATCTCGATGTAGTCGAATACCTCGGCGCGAGCGGCGTCCTTGGTGGAATAGGTCCGCCGCCTGATCCGCTCGCGTTTGAGCAGGCCGAAGAAGCTCTCCACGGGTGCGTTGTCGTGGCAGTTGCCACGCCGACTCATGCTGCACACCACGCCATGGGACGCCAGGAAACTGCGCCAGTCATCGCTGGTGTAGACAGACCCTTGGTCCGAATGAACCAAGCAACCAGCGTTGGGTTTGCGCCGCCACACCGCAGACA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCGTAGGCAGCTCAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGCGTAGGCAGCTCAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [65.0-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.51,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //