Array 1 487-776 **** Predicted by CRISPRDetect 2.4 *** >NZ_LFPB01000054.1 Clostridium botulinum strain L-572 20541_54, whole genome shotgun sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 487 30 100.0 35 .............................. TTATATATTCCTCCTAAATTCCATCAGTATAACTA 552 30 100.0 36 .............................. TTATTTACAAGCACTTTATGTGAATACATATTTTCA 618 30 100.0 35 .............................. AAGTAATCTTAGCGGAGTTACATTACAATCAAGAC 683 30 100.0 34 .............................. GGAATAATGAGTGGAATAGGAAGTGTTATGAAAG 747 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ==================================== ================== 5 30 100.0 35 GTTTAACCTTAACATGAGATGTATTTAAAT # Left flank : ATGACTTTTAATCATGGTGTCCCGGGTTCGATTCCCGGGTGAGCCACCAAAATATTGTCCAAAGTAGAAATGTGAGTTTTTACTTTGGATTTTTTTTATTTTAGAAGAATAAAATAAAATACAATATTGATTAGATATTTTAGATAATAAAACAATAGCAATAAAAATGGGATTAACAGAAGAAATAGATGCTCTTAGAAAAAAGAAGGTAATTAGTATTTTTTAGAAACACTTAGAATTTAATTATCTTAGTTTTTTTCTGTACAATTCTATTAAAGTGTATAATTTAACTAGAATAGTAAATATTCTATTTTACCAGCCATAAATTTATATAAAATCCCTTAATCCATTGAAATTACTGGGCTAAGGTTGCCATTGAAAATTTTTATTGAAATTTCACAAACAGTTGGTAAAGTTTCCTTGAAACCTTGAAGTTTCAATGCCTTAGTGGTATTATTGATTTAAGAGAATGGCTATTTTACTGTAG # Right flank : TAGTTGTATATAACCATCTTGGAATGTTTGTAGTGATTTAACCTTAAAACATCCTTATAGCTATAACTTAGTTTTGTAGCTATAAGGATGTTTTTTTACTCTTAATAATGTAACAAAATATGTTATACTTGAAAAAAACAAATTGTAATTTGCATGGGAGAATACAAAAATGAGCAAATTGACTAAATATATTGAAGATTTAAGAAAAAAGTATGGGGATGCAATAGTAACAAAAGAAAGTCATTATGATGATATGATGCTTTTAAAGGTACCTAAGCCATTGAGGGAATTTTATAGGGAATATGAAAGTTTAGAAATGCCTTTTGGAATTATTGACTCTATCGAAATCAGTATAAGATCTTCAGAAGCAGAACCCTTTAAAAGTGAAGGCTGGTTTTCATTTGGTGCAGATAGATATTTTTCCTTCTGGCTATGTGCTTATAAGGAAGATAATTATGGTAATTCCATTATTTCATAGGATCACGATATAGATGATGAAA # Questionable array : NO Score: 6.06 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTAACCTTAACATGAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [68.3-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0,0 Confidence: NA] # Array family : NA // Array 2 3456-3748 **** Predicted by CRISPRDetect 2.4 *** >NZ_LFPB01000054.1 Clostridium botulinum strain L-572 20541_54, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 3456 30 100.0 36 .............................. ATAACAATTTGATATTCTGCATTTAAGAAATCATTA 3522 30 100.0 36 .............................. TTATCTGCAAAATATTTAATTATCTTATACTTGTAT 3588 30 100.0 36 .............................. TCTGCAATTGTAAAAACCTTTGCCATGCTATCTTCA 3654 30 96.7 35 .................T............ AGTGAAGTTACTAACATACCTGGATTTGCTTTAAA 3719 30 90.0 0 ...............A........G.T... | ========== ====== ====== ====== ============================== ==================================== ================== 5 30 97.3 36 GTTTAACCTTAACATGAGATGTATTTAAAT # Left flank : TATGGGGGGAGTATTAAATAAGCGAGCTCATACAAGCAATGACTTGGGGTATCTTAAAATGGTCTGCCCAAGCTATGATGGAGAAAAGTATTATAAGCAGGAATGTGTAGTAACTGATGGAAGCTTGATTACTGCTTCTGGAATAGCTCCCCTTGAATTTGCTTTCCATATATTAAAAATTCTAGATGTATTCTTACCGCAAACCTTAGATTCCTGGTACAATCTTTATAAAACCCAAGAGTCAAAATATTTCTTTGAGTTGATGAACTCAAAGAAATAAAATAGCTTAAAGTGGGTAAGATAGCTATAATATTAAGTATTCTATTTTACCAGCCATAAATTTATATAAAATCCCTTAATCCATTGAAATTACATGGCTTCAGTGATTTTTAATAAGGTTTCTAAAAGTTTCACAAACAGCTGGTAAAGTTTCCTTAAAACCTTGAAGTTTCAATGCCTTAGTGGTATTATTGATTTTAGAGAATGGCTATTTTACTGTG # Right flank : TCCCTATAATTTTAAAAATCATTTATAAATTCATAATAATAATATATAATATATATAAGGAAATAATACAAATGATAGTGATAAATAAGAAAGGCGTGAAATAGCTTGATTAAAAAGCATGATTTTGATGCAGCATGGAAATCAATATTAGAAGCCTTTGAAATAGAAATAGTAGAGCTACTTTTTCCAGAGATATTTGATAATATTGCATGGCAACTTGGAACCGAAAGTCTAGATCAAGAACTACAAGAAATTCAAAAGGATATTTTTGATAAAGATAGTGCAGAAAAGATAATATCAGATAAGATAATAAAGGTTAGATTAAAAGATAAAGGAAGTAAAATATTATTTATTCATGTAGAAGTACAGAGCTATAGTAGCGATGAAGCTGTATTTGGCGAAAGAATGTTTAGATATTTTTATAGAATTTGGGATAAATTCAGATATAAATACAAAGATAAATCAGAAATAGTTGCTGCGGCAATATACACTTACAAGGG # Questionable array : NO Score: 5.92 # Score Detail : 1:0, 2:3, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTAACCTTAACATGAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [66.7-88.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.27 Confidence: LOW] # Array family : NA // Array 3 5161-5385 **** Predicted by CRISPRDetect 2.4 *** >NZ_LFPB01000054.1 Clostridium botulinum strain L-572 20541_54, whole genome shotgun sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ======================================= ================== 5161 28 100.0 38 ............................ ATGTTAAATATGTACAAGAAGATGACTTAGAAAACAAT 5227 28 100.0 39 ............................ ATAAATATACTGGATGGGCGGGAGAAGGAACTTTAACAA 5294 28 100.0 36 ............................ ATGTATTTTAAGGGGTGGAAAATTTTAATGTTTTAT 5358 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ======================================= ================== 4 28 100.0 38 GATTAACCTTAACATGAGATGTATTTAA # Left flank : AAGGCAGAGAAGAAGGAGAAAAAATTAAGGCGCTAGAAATAGCAAAAAATTTACTAGATATCTTAGATAATAAAACAATAGCAATAAAAACTGGATTAACAGAAGAAGAAATAGATGCTCTTAGAAAAAAAGAAGTTAATTAGTGTTTTTTTAAAACATTTAAGATTTAGTTATCCTTGACAAAGTATCCCATTTAAAGAGTTATAATGATTTTTTTAATTGTTATAGCTCTTTATTTTTCTCCGAAAAATAAAGATATTAAGCTCAAATTTACTTTAAGAATTGTAAAAATAAAGTAAGTTAGCTATAATATTAAGCATTCTATTTTACCAGCCTTAAATTTATATAAACTCCCTTAATCCATTGAAATTACAGGGCTAAGGTGACCTTTAAAAATTTTTATTAAAATTTGACAAACGGCTGGTAAAGTTTCCTTGAAACCTTGAAGTTTCAATGCCTTAATGGTATTATTGATTTTAGAGAATGGCTATTTTACTGTG # Right flank : ATTAAATTATAAACATCAGCACTGAACGTGTTGGTGTTTTTTGATTTTTATATGGAAAAATATAGAGTATAATAGAATTTGCAAAGAAATTTATAGAAATATAGTTTATATTAGATTACTATAAATAATAAATGGGGGTATTAATAATGAAATTTAATAAGAAGGGGAAGGTTATTACTACTATTTTGCTTGTAATTGCAGTAGTTATAGGAATGTTTGCTTTTAAAATATTTCATAGAGTAACTAACTCTCCTATGATTAAAAGTGAAGATAGAAATGAGAAATTTATAGCAGATATTGAGTTCTTAAAAAAGGAATTACCTAAAAAGCATAAGAATTTATTTTTTTCTAAATCCAAAGAAGAATTTAATGATGAGATTGACTCACTAATTAACAATGTTTCAAGATATAGTGATGAAGAGATAAATGGTGAACTTGCAAAAATAATAGTATCTATTAATGACAGTCATACTAATGTAGACATTATGGGTTCACTAGCT # Questionable array : NO Score: 5.86 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATTAACCTTAACATGAGATGTATTTAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [68.3-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0,0 Confidence: NA] # Array family : NA //