Array 1 17748-18090 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJCIN010000050.1 Enterocloster bolteae strain DFI.2.21 AHMKEBMP_50, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ==================================== ================== 17748 33 100.0 34 ................................. ATCTTTTCCACCACTTCTGTAGCTCTGCTTCTGA 17815 33 100.0 36 ................................. GCCCGTACCTCCCGGAGCTTCTCGCTTAGAGTTTCT 17884 33 100.0 33 ................................. ACCTGTTCTATCGGCATACCCCTGTTCAGCAAA 17950 33 100.0 33 ................................. CGAATGAGTAAACTCCTGGTTGTCAAGTACACG 18016 33 84.8 9 .........................C..TTCC. TTCTGGTCA Deletion [18058] 18058 32 75.8 0 ............A.-A...A..CAA.C...... | G [18088] ========== ====== ====== ====== ================================= ==================================== ================== 6 33 93.4 29 GTCTCCGTCCTCGCGGGCGGAGTGGGTTGAAAT # Left flank : TGCTGATACTGATTACATATGATGTGAATACGGAAACCGCTGCAGGCAGGACCAGGCTGAGAAAGATTGCAAAGCAATGCGTTAATTACGGCACCCGCGTCCAGAATTCTGTATTTGAATGTATTTTGGATAATACCCAGCTGATAAAGCTAAAAGCCATACTGACAGATATCATTGATGAGCAGACTGACAGCCTTAGATTTTACAACCTGGGAAATAAACACACTACAAAGGTGGACCATGTTGGGGTGAGTAAAGGGATTAAAGTGGAAGAGCCGCTGATATTCTGACCTGGCTGCGGGCGGTAAGGAGGTTTCAAATAGTTTGGTGCGAACCAGAAGCAAACATGAATTTACGGGGGGATTCGCACCGGAAAAACTGCACAGTGAAAACGGCTTTGGATGTGTGCAGGGTAGGTTGGCGGTGATTTGAGGGAGTATGATGTGATTTGATTGTGGAAATGTGATGAAGAATTGTTGGTTTTTTTGTGTAGTATTGCT # Right flank : TCCGCCAAATTCAGGATTACGTTTAGTCAAAACATCATTCCCCTTTTTCTAAGAAAACAGTATAGTTTGAATCATAAACATTAGCTATAACTAACAACACGCAACAAGAAAGGTGGGCGAACACCCACCTTTGCCATAAAACTGTTATAGGGTATAAAGAACGCGGGCCTCCCTCACCCTTTCCATGCCAGAATCTCTCTAAGCCCCGGCACCAGCACTTTGGCGCTGGTTTCCAGAATAATCCGTCCTTTTTCAGCCGTGGCGCCTGACGGGTCTCCGCCGATTCCTATGGGTTTGCCGTCTGCTGTTTTCCAGTCCTCGGACACCCAGCCAATGGATACGTTTCCATAAGGCCTCAGTGCCTGATTGTCTTTAAATGCAGTTGGAATTCCTGCCTCTGAGGTATCTAACTTTACCAGGGACGGGTCCACGGCCATGACCATGGAGGTTTCCATCTCGCCTCCATGGAAGTCCCAGATATTTCCCTCTGAAATGGTGGC # Questionable array : NO Score: 5.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.67, 5:0, 6:0.25, 7:-0.47, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCCGTCCTCGCGGGCGGAGTGGGTTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,8] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCTCCGTCCTCGCGGGCGGAGTGGGTTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-6.90,-2.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-14] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 113807-112771 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJCIN010000001.1 Enterocloster bolteae strain DFI.2.21 AHMKEBMP_1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ==================================== ================== 113806 33 100.0 34 ................................. ATGATACTATTGCCCGGTATGTCCCGGATGATAA 113739 33 100.0 36 ................................. ACGAATGGAGCCGACACGGTCTCAAGCTCCCACGAG 113670 33 100.0 33 ................................. GCAAGTTGACCTTGAGACATGCCACTTTTTGCC 113604 33 100.0 34 ................................. TCTTCCGCACTGCAAAAATACTGGGCCTAAAACC 113537 33 100.0 34 ................................. CACCTCTGGGATGGTTAAAACCACCCCAGCAGGG 113470 33 100.0 33 ................................. CCCGTCATCCACATCTATCATGCCCCTTGACTG 113404 33 100.0 33 ................................. ATTATCTGTTACATTTGTGTCACTGGTTGAATC 113338 33 100.0 35 ................................. TTGACTTAATAGGGGCAAGTGAAGGTGGACGAGAA 113270 33 100.0 33 ................................. CTATGTATTTACGCATTACTGTATCAATCCTTG 113204 33 100.0 33 ................................. AGTAGTTGTCTAACTATGGCCTTAAACTTTTTC 113138 33 97.0 34 ..............A.................. ATTTGCACAGGCTGGGCAGGGTCCTCCCCTGTCC 113071 33 100.0 34 ................................. ATCAAATATCGGCGGTTAAAGTTTAAGTCTCCCA 113004 33 100.0 34 ................................. TGCATCTTACAAATAAAGAATTACCGGTTAAGCG 112937 33 100.0 34 ................................. AAGCTTTCATCAAAAATCACATTTATCGTTCCGG 112870 33 100.0 34 ................................. AATGAAATGATGTCGCTTGTATCAACGTCATATA 112803 33 78.8 0 .......T..............CA..CCA...G | ========== ====== ====== ====== ================================= ==================================== ================== 16 33 98.5 34 GTCGAGGCTCGCGAGAGCCTTGTGGATTGAAAT # Left flank : AAGTTCTGGAACTACCTGAAAAATGTGGATTTCTGGCAGTGGCCGGAACAGCGGTGGCCCTGAAGGCGGGAAAGCTGGCTGCTGTAATGGAACGTCAGGGCAGAGTACTGCGTATTTGCGATGCCGAAGATATGAAGGAAGTGATGGCGGAATTTGTCCGTGCGTTCAAGCAGGGAGCCATATATCCGGAACAAAAGAGGCTTGTATTGAAAGAGTATCCGGCGGAGGCGGCAGAGGCTTTGCAGCATGCAGGATATATGCGGGAAATGAAGGATTATGTAATATATAAGTAGAGTTGGTTTCTGTGAGTTGGGAGCCCTTCAAACCAGGTACGAATGCCAAGCTGACATGAAATGCCTGGGAGATTCGCACCTGAAAAACAGAGGAAAAGGCCGTGAAAGCGGGCTGGGTGAATGGACTGAATTGGTTGAACTGGGGAGAGAAGAGCATAATGCATAAAATGTTAGGGGGGATGTGGCGCAGGTTTGGATAATTTTGCT # Right flank : ATACCTGTAAGCCCCTAAATTAATGCAAAAGGAAAATTGCGCCCCGCGTACCTAATGCATTGAAAGCAGCCATAATTATATATTGAGAATTCGCAAAACATCAGTTAAAAGAACATATTAACAGTATCCCGGTCAACAGGGAATCCGTTAAGCACATCCCCCCCTCTGCAAATAACATCCGCCCCCAAAAACACCAACATAAACAAAGGAGTAACACATATATGATTGAAATAATCTATAGAGACAAACGCTTTCTTGTTAAGGGCAGCTTTTCCATAGGAATAGCAGGAAACTATGTAAATGAGGATTTTGGGGATGAGAATATCATGATTAACGATACGTTAGAGGAAATCATGAAAGAATTGCAGGATGAGGACTCCTTTTGGTACAAGCCGCTGTTTCCCTATCTTAAATCTGAGACAGCAGACAGTGGCGGAATAGCCAGAGGTCTTACCGCGTACTACAATCAAAAGGAAAAGGAAATCAGGGAGAATGAAAAG # Questionable array : NO Score: 9.19 # Score Detail : 1:0, 2:3, 3:3, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGAGGCTCGCGAGAGCCTTGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [8,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGAGGCTCGCGAGAGCCTTGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-8.00,-8.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [56.7-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,9.78 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //