Array 1 1197180-1198005 **** Predicted by CRISPRDetect 2.4 *** >NZ_AP019004.1 Phascolarctobacterium faecium strain JCM 30894 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 1197180 36 100.0 30 .................................... AAAGTAAGAATCATAGTAGTTTTGTTAGAC 1197246 36 100.0 30 .................................... TCGAGCGTTGCAGGATCATTCAAACGGTTG 1197312 36 100.0 30 .................................... GTTTCACCTCGTTTCTATTAAAAGTATAAC 1197378 36 100.0 30 .................................... ATTTTCGAGACGACAACCGATGCATTGTTT 1197444 36 100.0 30 .................................... TTCTCGTCCTGAACAGTAAGAGAGGGCATG 1197510 36 100.0 30 .................................... TTGTCAAGTATTTTTTTGAAAAATCGCAAA 1197576 36 100.0 30 .................................... CGCTCTTGCTCGTGCTAAAGATAGTACTTT 1197642 36 100.0 30 .................................... ATATGGAGTTAGCGTATAACTTTGATGAAC 1197708 36 100.0 29 .................................... TTGTCTGTGTTGACGCAACAATCGCATCT 1197773 36 100.0 29 .................................... CTACTTTGTCCGGAAACGGAGAAGCGGCA 1197838 36 100.0 30 .................................... CCGTAAGAGATTCAGACCTTTTGAATAATA 1197904 36 100.0 30 .................................... AGTTCCTCTTCCCAATCTTTACCCTTTTTG 1197970 36 97.2 0 ................................G... | ========== ====== ====== ====== ==================================== ============================== ================== 13 36 99.8 30 GTTTTAGTACTTTGTAAATTCTTAATGTGATAAAAC # Left flank : ATGTTGATAATATCGAAAATGTACTGATCTATACTAATTCTAAAGAAATACTTGAATATGTAAGGGATATCTATGCGTATCATATTATAAAAGCTGGGAGTATATTGGGTTTTGATGATTACGATGAAATGGAACTGTTAATTTCTGATAAATTTTATAATGGAAAAAGCAAGGAGCAGTTGCTGGATGAGTTATTAAAAGCTGTATTCAACGAAACAGAGTATAATGAAAAATTTGGTGATATCGACAAGTTATTTCGGAAATAAGATTGACAAAACTATAAAACAGGTTATAATAAAAGTATCACATTTATTGCATTAAGAATTTACAAATCCTACTAAAACAAGACTTTATGTCGAAATCACATTCCTTTAGGAATGGCAAAAAATAATGTTGTATTTTAAACCATAGCAATTTCGATTTTGGTCGGATTTGTCTATGTTTTTTTTGTTTAAAACTGTCATATTAGGAATGTATAAGGGCATATAACCGTTGTTGAG # Right flank : CTCGGAAACTTTTTGATGATGAATATGATTAGTAGAGGTTATGGTTGTCAATACATTGTTTTGCAGAACTTGAGGAGGTTTTATGGAACGAACTCATCGTATCATGTTTGTTTGTCACGGTAATATCTGTCGTTCGCCAATGGCAGAATTTTTGCTGAAGGACATGATCAAAAAAGAAGGGCTTGCGGACAGGTTTGTGATTGCATCGGCAGGTACAAGCAGGGAAGAAATAGGTAATCCTGTGCATCAGGGAACACGTAAAAAACTGGCGCAGGATCATATCAGTGCGGCGGGTAAATACGCTGTGCAGCTTACCAAAGAAGATTATGAAAAATATGATCTTATTTTGGGTATGGATCGTGCCAATATCAGTAATATTCTGCGGATCATAGGCAGTGACCCGCAGGAAAAGGTGCATCGTCTGCTGGATTTTACCGAGTTGCCGCGTGACATTGCTGATCCCTGGTATACTGGTGATTTTGAAATTACGTATGCGGAGA # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGTACTTTGTAAATTCTTAATGTGATAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:77.78%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.10,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA //