Array 1 20586-25477 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAIWTZ010000011.1 Acinetobacter baumannii strain 17A1960 ctg_11, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 20586 30 96.7 30 ............................A. TACCGATATTTCCACCTCCTATACCCTGAG 20646 30 100.0 30 .............................. CTGAAATTGACTCAAGAAAGAGTCGAACTT 20706 30 93.3 30 ............................CG CCTGTGGTGCTGGATCCACGCTATTAGCAT 20766 30 96.7 30 .............................G CTTGTATGCAGGCTTTATAACGTCTTTCAC 20826 30 93.3 30 ............................AC TAAGATTGTTTCTGAGGAAGATTATTATAA 20886 30 100.0 30 .............................. CGATTTCTAAATCAAAGGGAACTTTTTCAA 20946 30 96.7 30 .............................G CAAAGGATAAAAGAGATAAAGTAGTACAAA 21006 30 96.7 30 .............................A CACATGGCAAACAGATTTCAAATATCTTTT 21066 30 93.3 30 ............................AA AAACCTGAAGAATCAGAATTATTTCAGGAT 21126 30 93.3 30 ............................AA ACAGTATAAGAACTAAAGCTACTCCTGCTA 21186 30 96.7 30 .............................A CGCCCTCTGCAATCTCATTTACCTGATTAT 21246 30 93.3 30 ............................AG AAACTCCAAGTATCACTTGTATTTCTATAT 21306 30 96.7 30 .............................A CTGCGCCGATTAAAGCTTTAATTGCTAAAT 21366 30 96.7 30 .............................G GGGCATAACACGGTAAGAACCGAGCTACGC 21426 30 93.3 30 ............................AG TAACAACAACTGCAAGTGGTAAACGTTTAG 21486 30 96.7 30 ............................A. GCAGAATCAACAGGATTAATTCCTAAACTC 21546 30 93.3 30 ............................AA CATGAGCCAAAACTTTATTGGACTTTTGAT 21606 30 96.7 30 ............................A. TAAGGATACTTTGTTCCATTAAATTTCCGA 21666 30 96.7 30 .............................G CAAATGACATGGTTCAACAATTAAATTCAT 21726 30 96.7 30 .............................A ACAGCCGAAAGGCTGTTAGGCTTTATTCAC 21786 30 96.7 30 .............................G CTACAAACTTTATAGCAAAATCATCTTCTA 21846 30 93.3 30 ............................AA ATAAAAAGAAATTGAATACAACCACCATTA 21906 30 96.7 30 .............................A TAACATCATTTTCAGTATCACAAACGATTA 21966 30 100.0 30 .............................. TACCATATCGTGTTGCGCCAATAACTTGCA 22026 30 96.7 30 ............................G. ATGAGTCACTTCCATCTGACTATACAGATA 22086 30 96.7 30 ............................G. ATGATGCCGTAGCTTCTCAAATCATGTCTG 22146 30 96.7 30 .............................A AGGCATATGGCAAATTTGAAGAAGTTAAAA 22206 30 93.3 30 ............................AC TGAGATGTTCAAAAGATCAAAATCCTCTTT 22266 30 96.7 30 ............................G. ACGCACCGCACCCAGCTTTTTTCATAACTG 22326 30 93.3 30 ............................GC TTTTTTTTACTTCTTCTTCAACTTGTTTAA 22386 30 93.3 30 ............................AA GCACGAGACCAATCAAGCATCTTTGTTAAT 22446 30 100.0 30 .............................. TGAAAAGCCACATTCGCAAAGTTCAGATAA 22506 30 100.0 30 .............................. GGAAAAGCCACACTCACACAATTGGGAAAT 22566 30 96.7 30 .............................C ATCAAAGGCTTTGAGGGTAAGCGCCTTTGG 22626 30 96.7 30 .............................G TTGCGCTGTTTTTGAACGTGTAATTGGATA 22686 30 93.3 30 ............................CC AAAGCGGTTAAGCCTCCAAGATTTGCATAC 22746 30 96.7 30 ............................A. GGTAATACAATTCAATCTCACTACAAGAAT 22806 30 96.7 30 ............................A. ATATTTTACGTGTTGATTCAACTACGGGTG 22866 30 100.0 30 .............................. TGGGGTAACTGGTGCCTTTAAGTTGTTTTG 22926 30 100.0 30 .............................. CCAAAGTCTTGTTCAATATCTTGTTGTTGA 22986 30 100.0 30 .............................. GCTCATCAATACAGCTACAAGAAAATTTGT 23046 30 93.3 30 ............................AG CATAAGCATAAAAATTATGTGTGAATATCA 23106 30 93.3 30 ............................AA TATGCAACAATAGGAAATTGCTCAGCATCT 23166 30 93.3 30 ............................AG TTACATCATTGCTTTTAGTCTTTTCTATCT 23226 30 96.7 30 ............................A. GGGCCGCAACCATACGGTCTATGACTTCCA 23286 30 96.7 30 .............................C ATGATCATAGCCCTTATAGATATCGTATTT 23346 30 96.7 30 ............................C. GCGAAAGCGGGGTTTTTTATTGCCTGAAAT 23406 30 93.3 30 ............................GC ATAGGCATTTACTCCCGCTGTGAGTGAAGG 23466 30 96.7 30 .............................G AATTGGATTTCGTAAATCATTGAGCAAGTT 23526 30 93.3 30 ............................AG CATCAAGTAGATCAGCAGTTACCTGTTCAG 23586 30 100.0 30 .............................. CTGTATTAGTGGCCTTCATGTGCATTAAAA 23646 30 96.7 30 ............................A. ACATGCCCACGTTGAAAATCGGGTACCAGT 23706 30 96.7 30 ............................G. ATTAAAACTGCTTATAAACTTTCTTAAATC 23766 30 100.0 30 .............................. GAAAAAAAGCATCATATTGTTCGGGGCAGG 23826 30 96.7 30 ............................A. TTTTTCTGTTAACTCTAAAATACCCTTCCG 23886 30 96.7 30 .............................A AAAGTAGAGAGTGGCGGTGATTCACTAAGA 23946 30 96.7 30 ............................G. TGTCTGATCCGACAATTTGGCTGAGTACGT 24006 30 100.0 30 .............................. GTACAACAATATGACCCGTATCGATGTAAC 24066 30 93.3 30 ............................AA CAATTGCCTGAGTGGTATGAGCCACCAGTA 24126 30 100.0 30 .............................. TGATAGCTAAAGTAGAAATCAAAGTCGCAA 24186 30 100.0 30 .............................. TTATTGCTGGGAATGAAACATCAAAGCAAA 24246 30 96.7 30 .................T............ CTCATCGTGAAGGTTTTGCAAATATGCCTT 24306 30 96.7 30 .............................G TCCGAAATTCAGATGGTGAAGTGACATATG 24366 30 100.0 30 .............................. CAACCTACGCAAGTATTATGGGAACTATTT 24426 30 96.7 31 ............................G. CTTTATCAGTTACGATGGCATGAGTTTTTGT 24487 30 96.7 30 ............................A. AGCACGAGCAAGTTCTTGAGATGCCAAAAA 24547 30 96.7 30 ............................A. ATCTCGCAGATTTGGACAAGGTCACGAATA 24607 30 100.0 30 .............................. GGACAAAGATTATGACTGAGAAAGACGAGA 24667 30 100.0 30 .............................. GGATGTGCAATTTGGTCAAGATGTGGGGAG 24727 30 93.3 30 ............................CG AACACGACTTGAACCAAAGTTAGAAAAATA 24787 30 93.3 30 ............................CA ACTAAAAGCTATTTATGGGGGTAAAAATTT 24847 30 96.7 30 .............................G TCATTGGCCGGCCATTCACAACCCCGATAA 24907 30 93.3 31 ............................CC AAAAAATGAGGAAATTGGACAATATCCAACA 24968 30 96.7 30 .............................G TTGAACGAGTTATTCATAAGTGCCCGAAAT 25028 30 93.3 30 ............................AG CGGAAATCTTTTCAAGTGCGTAGGGGATAA 25088 30 100.0 30 .............................. CTCCAAGTAAAGAATAAAACAATATACCGC 25148 30 96.7 30 .............................C AAGGCGATCCACCTCCCGTCACAGTCATTT 25208 30 93.3 30 ...........T.C................ TGCTAAAAGGATTTATGCTTTAAAATACTT 25268 30 86.7 30 .......A.....C...T..........G. TGGCGTACGGATAACGGAAGAAAGCATAAG 25328 30 86.7 30 .......A.........T..........AA ATAACCACGGTTGTGGTAAGTCACTTTTAC 25388 30 80.0 30 .......A.A.....T.T..........GC GTTCAGGTTGAGGAGATGAAGTGATGTGAT 25448 30 70.0 0 ...T...A...T.....T..C...AGCG.. | ========== ====== ====== ====== ============================== =============================== ================== 82 30 95.7 30 GTTCATGGCGGCATACGCCATTTAGAAATT # Left flank : GGCAAATGGCTAGAACGATTCATTGATTATGTACATATCACTCAACCGAGAGAAGTGCCTCGAGCCAAGATTACAGGTTATGCGCATTACTATCGAGTTAATCATAGAATGAGTGTTGAGGAACGTATAGTTCATCAAGCACAACGTCGTAATATTTCTTTGGATCAGGCTAGACAGCATTTTAAACAATATGTTGAGCAACCAGTGGTTGAACCATACGTAAGTTTAAAAAGTCTCAGTGCAAAACGTGAGGAAAATGTAGATCGCCCCTATCGTTTATATATTGGTAAATCACTTGTTGATGAGGCAAGGGATGGGATGTTTGGAACTTATGGACTAAGCCGAATGACAACAGTCCCAGAGTTTTGACCCAATATTTTTTCTATTCTTTAACAGCTCAATAAAATCAATAAGTTACAATAGGTCTTTTTTGATTGGGTAAAATGCCAAAATCCATGATAAACACTTGTTGTAACTTATATTTTTACTATAATTTTATA # Right flank : TAAGATAAAAAAACAAATGATCACTGCTTAGTATTCTTTATCTTTAAATTTTAAAGAAGAAAATATATTCTGAGCTCAAGATATTTAGTGGTGAAATTTTTATGCGCGGTTTATACCTCATTACCAATGATGACCCAATCCAATTATTATTAGAAAAATTAGACGCCGCACTCGCAACCCGTCAAATCGCAATTTTACAGTACCGCCGTAAAAAAGTAGACAAAGCCGACCAACCTGCTGAAGTTGAACAGATCAAACAATTATGTGAAAAATATCAGGTTCCTTTTGTCATTAATGATGACCTAAAACTGGCTGCTCAGTTTGGTTTAGGTGTGCATTTAGGTCAAAGCGATGGCGAAATCACCGATGCAAAATCGCAGTTACCAGAAGGTGTTATTATTGGCCGTACTTGCTTAAACTCATTAGAACTTGCCCAAAAAGCTATTGCCGATGGTGCAACTTATGTTGCCTTTGGTGCGGTTTATGCAACTGCCACTAAA # Questionable array : NO Score: 5.30 # Score Detail : 1:0, 2:3, 3:0, 4:0.79, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.25, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.10,-6.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-21] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //