Array 1 427516-426046 **** Predicted by CRISPRDetect 2.4 *** >NZ_NSUO01000001.1 Pseudomonas aeruginosa strain C5311 IPC700_1.1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 427515 28 100.0 32 ............................ CTGCTGGACCTGTTCACCCGCGACCAATACAT 427455 28 100.0 32 ............................ TTCAGGTCCCGCTGGCTGTTGGCGACGGCCCG 427395 28 100.0 33 ............................ CAGCAGAAGCCGCTATGGGTGCCGACCCACGCC 427334 28 100.0 32 ............................ ACGGGCGGGCCGTCGGTGCCGATGCTGACCGT 427274 28 100.0 32 ............................ ATGTCGATCTGCTGCTTGCGACGCTCCCGCAT 427214 28 100.0 33 ............................ ATGACCCTGCCGCCTACCGGGCCTCGTTCGTGG 427153 28 100.0 32 ............................ TGTGGCTAGAGAGTCCGATGGGGGGGCGCTAT 427093 28 100.0 32 ............................ CTGTCCTGCGATGGCTCCATCTCGATTGCGCC 427033 28 100.0 32 ............................ TTGTCGGCGCCCTGGGCGTCAAGGCCGTACTC 426973 28 100.0 32 ............................ TCGACGTTGCCGACCCGCGGCCGCGCCCGGTT 426913 28 100.0 32 ............................ TCGGCCAAGGCTCCGGCATCGAGCACGATGCC 426853 28 100.0 32 ............................ TTGAGGAACAGGCGCGCTACGTCCGCCGCGAA 426793 28 100.0 32 ............................ TTGATGATGCCGTCCTGCTGTTTGCCGGCGAT 426733 28 100.0 32 ............................ ATTCCGGCAGAGGTTCGCGAAGCGGACATTGA 426673 28 100.0 32 ............................ TGTACCAACTGAGGTGCTACCTCAACCATGGC 426613 28 100.0 32 ............................ AGGCCGATGGAGTAGCCGGACAGCACTGAGCC 426553 28 100.0 32 ............................ TAGTGTGGAATTGATGTGCGCATCTTCTTAAA 426493 28 100.0 32 ............................ TGTGCCGGGCAGGCTGGCCAGCGCCTCATTGA 426433 28 100.0 32 ............................ GTCGGCCTGGAGTTTCGTCGGGCGTACATCAG 426373 28 96.4 32 .................T.......... CAAGCGGACGGTGACACGGACTATCAGACCGG 426313 28 100.0 32 ............................ TCCGGCACGCTGTGCTGAGCCTGAGCTACAGG 426253 28 100.0 32 ............................ ATCTCAGCGCCGCCTGTTCTGCCGGCCGCATC 426193 28 100.0 32 ............................ TACGGGCAGTCACGGCGAAAGGCACTCAGCGA 426133 28 100.0 32 ............................ TGCGCCCTAAATCAGTGATCCGGCGAATTTGG 426073 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 25 28 99.9 32 GTTCACTGCCGTATAGGCAGCTAAGAAA # Left flank : GACATGTGTCCGCGTAGCGCCACCCTGTACGTGGACACCCATGCACTCCCCACGCACTTGTTCGACAACGCGAAAGTGCGCTTGAGGTCGGCGATCAACATCCTGGCCATGACCCGTTTGCTCGATGAGAAAGAAGAGCCCGGCGGCACCCTGGCCTACATCAACGGTGCGTTGCTGTCGCTGCTCAGCGATGCCTTGTCCGAAATCGAGGCGGGCCACCCGAGCCTGTAGCGCCGCTCCCTGGCGCGACGCCCCCGGCCTGGCCGGGGGCTTTGCGGCATCGCCATCACAAGACCTTTCGCGCCCGAACGGCACGCTTGATCGCCGTCCCGGTCCTCGCGAAACGGCCGCCAATTGCCCGAAGCTTCCGACCCTTTTTTCGGACGATTTCTTACGCCCTTATAAATCAGCAAGTTACGAGACCTCGAAAAAAGAGGGTTTCTGGCGGGAAAAACTCGGTATTTCTTTTTCCTTCAAATGGTTATAGGTTTTCGGGGCTA # Right flank : CTCAAGAAAGAGCAGAACGGCCAGCTTGCGCCGTTCATTGCCGTGTAGTCCCGTAGGGCGAATGCCGCCATAGGCGGTATCCGCCCTACGGATCGGGTTCCTGGCATCCACGAAGTGAGGCTTGCCCTCCAAGTGGTGGGGCGGCAAACCCGCCCCGTCAGGAGGCCGAGCGGAATCGTTGCGGAGGGGGACGAGTGGCAGGATGCCGCGAGAGCCGCCTCGGTCCACGAAGGACCGTGGCGGCGTGCCGCCGGGAGCAACGATGCAGCGAGGGCACCCCAGCCGAGAAGCGGCTGGGGCCGGATGCCGGGGCGAGTCTTTTGGTTCCTTTTGGACGCTTGCAAAAGGAACTCGCCTGGGAAGGCGAAACAAGAGGCCAAGGCAGGCACAGAAAATAGCTTGACCACCAAACATGACGCCCGCTCAAGCGCTAAGCAACAGCGCCCCCCTCACTGCCGTGTAGCTAAGAAATCGCGAGCGATATAGTCCCGTAGGGCGAA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTATAGGCAGCTAAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched GTTCACTGCCGTATAGGCAGCTAAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [40.0-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //