Array 1 20072-19578 **** Predicted by CRISPRDetect 2.4 *** >NZ_LDHZ01000028.1 Bacillus xiamenensis strain G25-119 G25-119_contig000028, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 20071 32 100.0 35 ................................ CGGAAAAAACGGGGGTATTTATGCTAACCGTGCTT 20004 32 100.0 33 ................................ TAAAATAATCTTTACCTAAGTTTACCTCATCTT 19939 32 100.0 35 ................................ CGAAAGTATGCGGAAGAATCAAAAGAAGATATGTC 19872 32 100.0 33 ................................ CAGTCACATGCTTCTGCCTCGTCTTCTAAATTT 19807 32 100.0 34 ................................ GTTTGCGTGAATATAAGGATGGACAGTATACAGG 19741 32 100.0 35 ................................ TCCAAATTTCGAATCATGCACAGTTAGCATATTAT 19674 32 100.0 33 ................................ TTTCCAACGTGGTACGAGGCGACACTCAAAAAG 19609 32 78.1 0 .................C..A.AC..CAC... | ========== ====== ====== ====== ================================ =================================== ================== 8 32 97.3 34 GTCGCACTCTACATGAGTGCGTGGATTGAAAT # Left flank : CCTGAGACAGTAAAGGGAGCATTCAAAGTAGATGTCATGACACCACATCATTCAGACTACAACAGCGTTAAGCTAGATAAGATGAATCGAAGGAGAAGTGTTCCAGCTCCTCGAGACGATGACTCACCGACACCCATTCATTTCTTAACGGTGGTCAATGGCCGCTTTCAACTTCTATTGAAAACAAAAAAGAATCTACCAGAAGAAACGGAATGGCTCGAACTGGCCAAAACCATCTTACTAGGAGCTTTAGAACACGAAGGAATCGGTGCTAAAACAAATGCAGGTTATGGAAGACTTGAAATAGACGACGTCATTTCATAAGACTTGGTGCGAATGTGAGGTGAACATAAAATCCCTGAAACATTCGCACCTTTTCATTCGACAAAATTGAGAAAAAATGTATATTCTTCAGGGGTGAAAACTTAATTCCTATATAGAAACTTAAGGGTTTTGACGATCATTCCCTAAAAAATGTTACAATTAAGGCGAAAATCGCC # Right flank : TTCAAGTGCCTATCCAATTCAACATCTACACAAATGAATAATCAACATAATGTACTCTCCCCTAGATCCAAGCCCTACATAACACAAAAAAAGACTCGCTCACACAGAGCCGAGTCTTAATTTTTTTTGCAGTTTTTCTTCACTGAAAATCCAGCCGGTATAAGAATTTTTGATTTGATGATCCATGTCGATATGGCAGATCGCGACGAAAGGATAGTGACCTTTGCTGCGGTAGCGCAAATCAATGAACCGCACCTCATAATGATCCTTGTATTTATCTACTTCCCACCGGTAGACAGGGGAGAAGGAGAGAAAGGCTGAAATGTTTTCATCTTGTTTGGCAATTTTCATAATTTCTGTATCAGGGACAGGCACACGGTTAAATGTGTCTAAAATGACGATCTCTCCATTCATACTGCGTCCAACATGGAAGGAGGATTTACATTTCACGGCAATGCGCCATTGTCTGAACTTCATTGTAGGCGAAATAATAATGTCTT # Questionable array : NO Score: 9.12 # Score Detail : 1:0, 2:3, 3:3, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTACATGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.12%AT] # Reference repeat match prediction: R [matched GTCGCACTCTACATGAGTGCGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.60,-4.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.78 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 28324-27767 **** Predicted by CRISPRDetect 2.4 *** >NZ_LDHZ01000028.1 Bacillus xiamenensis strain G25-119 G25-119_contig000028, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 28323 32 100.0 33 ................................ ACAAATCATTTCTAACTTGTCAAATGGAGATAT 28258 32 100.0 34 ................................ TTTACAGTTTGGACACTTTAATAAAGGAACGTTT 28192 32 100.0 33 ................................ ACTTTATCAATAAAAACCGAGCGAAAAATCTCG 28127 32 100.0 34 ................................ AATCTTGTTCTAATACGGTAAATCCTAATGAATT 28061 32 100.0 35 ................................ GTAAGCGTACCGGCAAAGGAACATACGTGATCCAA 27994 32 100.0 34 ................................ TTTTTGTCGAACCCAACTAACTTCAAGTCCATGC 27928 32 100.0 32 ................................ ACATCCCGCGGATGTTGTGGCAATACAATACC 27864 32 100.0 34 ................................ TCCCTCCAATCTTCGGTATTTCAACGCCGCCCAT 27798 32 84.4 0 .................C..A...T..TC... | ========== ====== ====== ====== ================================ =================================== ================== 9 32 98.3 34 GTCGCACTCTACATGAGTGCGTGGATTGAAAT # Left flank : ATGAAGGAAATCGCTGACCGGCTAGGCGAAACAAGACAAAACATCTCAAACATTCACAAAAAAGCACTCAACAAACTAAAAGAAGAAACAGGGGGAGATGTCCGTGAAAGAAGACAAAATCACCAATGGAGAAATGGAAAAACTCATTGAAACCTTTACACCCATGATCAAAAAGAAACTACAAAACACGGCATATCAAGAAAGAGAAGACCTCGAACAAGAACTCTATATCAAACTGATCGAAAAAGTAGACTGGCTGATTTATCAAGAAGTACCTGGTTTTTGGGAATTTATTGTGGATTATCTAACGAAGTTGTAAAAGAGGCTGATGGTGCGAATGTGAGGTGAACATAAAATCCCCGGAGCATTCGCACCTTTTTATTCGACAAAATTGAGAAAAAATGTATATTTTGTAGAGGGGAAAACAAAATTTGAATGAGAATATTGGTGATTTTGACTGTGATTCCCTAAAAAATGTTATAATTAGGGCGAAAATCGCA # Right flank : GATTCTGTCTTAAACGGGTATGACTTCCTTTAAGAACATGTTCTTATAACAGCCTTTTTTCCGATACAAAAGCCATCAGAATATACTGTTCATTTGTATAGTGAAAACATGACTCCTTGCAGTCATGTTTTTTTCTTCTTATTTTTCCTAAATAAACCTTAAAAAATCTCAAAATAAGTCGAAATGAAAAGTAGTCATTTAGATTCAAATTTTATCCATTCGTAGTGAATGGTGAAGGAGGAAATGGTTTGGGTGAAACGGAGCGAACTGGTAAAGTTGAGCAGCTGATCTTAGAGAATTATCAAAGATTAAACAGCATGATATCAGAAGAAGTGGACTTTGCTTCTAATCATGGCGGGCTGACAGGGGATTCTAGAGAAGTGATGTGGCTGGAGTTTTTTCGGAAAATCATTCCTAAAAAATATTCATTAGCACAAGGGGTCATCATTATTGACTCAGAAGGAAGACATTCGAACGAAGTCGATATTGCCGTATTTGAT # Questionable array : NO Score: 9.17 # Score Detail : 1:0, 2:3, 3:3, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTACATGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.12%AT] # Reference repeat match prediction: R [matched GTCGCACTCTACATGAGTGCGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.60,-4.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.78 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //