Array 1 16244-12190 **** Predicted by CRISPRDetect 2.4 *** >NZ_LAIY01000041.1 Acinetobacter baumannii strain S11 S11_contig_45, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 16243 30 93.3 30 ............................AC TTTGTGCAAGCAATCATAATGTTGGAATTA 16183 30 100.0 30 .............................. CTTGAGATAAGCGACCATCACTTGTGATAA 16123 30 93.3 30 ............................AG ACTTTGAGCGAATAGTCCAGTAAACCGCCC 16063 30 96.7 30 .............................C ATGGATTTCTTCTAGGCATGTGGTGCCATT 16003 30 100.0 30 .............................. GCGGTAATTGCCATGCAGCCATTGGACCCG 15943 30 100.0 30 .............................. CTTCAATTAATTGAACAAAAAGCTAATGGT 15883 30 93.3 30 ............................CA TGTAAGGCACTGGTTTGTAGCCTGGTCAAT 15823 30 96.7 30 .............................C GTAAAGCAAAAGGTACTGGCTTGCCTTCTG 15763 30 100.0 30 .............................. GAGCTTAATAAGCCCGCCTTTGATGACATT 15703 30 93.3 30 ............................AG CGGTAGCAGTCCCCAAAATTAACTTTGCAA 15643 30 100.0 30 .............................. CTGAACTCAAAGCAGATATGGGGGATTGGT 15583 30 96.7 30 ............................A. TTCTTAGTGATGCAGCACGTAATGTGTACG 15523 30 93.3 30 ............................AG TGAGGATTCACACCTAGAAACTGGGCAGCT 15463 30 96.7 30 .............................G CTGCTTGAACAACATGAATTGCCCATTCAG 15403 30 93.3 30 ............................AA AAATATTGATACGATGGATTAACAACAGAA 15343 30 93.3 30 ............................AG AAGCGTCATGAATATTTGGTTTGGCTTGAA 15283 30 96.7 30 .............................G ATCATTAGTGCCTCTTCGGAAATCAACTTT 15223 30 93.3 30 ............................AA AGAGTATGTATTAGAGGGCTATGCACTTAC 15163 30 96.7 30 .............................G AAAATAATTAAATGGTCTATCACCGTCTTC 15103 30 93.3 30 ............................AG TAGATGCAGCACACAGCAATCAGGGCGCTC 15043 30 93.3 30 ............................AG CGCGGAAGAGCATTCGGGTGAGTTGGATTA 14983 30 93.3 30 ............................AG GCAAAAGGAACGGCTGGCTAACGCCACTAT 14923 30 93.3 30 ............................AC ATTCCAGCAAACAACAGTGTAGATCCAATT 14863 30 96.7 31 .............................C TTTCACAAAAAATGATGGTTATTTTGAATGT 14802 30 93.3 30 ............................AA TAAACAGCATTTCATCAGTTGCGTAATAAA 14742 30 96.7 30 .............................C CAAAAGAGCAAGCAGAATTTAGTGCATGTA 14682 30 93.3 31 ............................CA CCAACCGACAATGTAGCATCGGCAACTAAAC 14621 30 96.7 30 .............................A TGACACGCTATCAAGTGACGGTGCAAATAA 14561 30 96.7 30 .............................G ATCTCTCTTAGCTTTGTATTCAGGGTCTAA 14501 30 96.7 30 .............................G CTACAGATATAACTAATCAGTTAAATAACT 14441 30 96.7 30 .............................A TCCATTTTCTGATGGTGGCGCATTCTCTTC 14381 30 96.7 30 .............................C AAGCAAATCCCGATGATCCTACAGCACCTA 14321 30 93.3 30 ............................AC AAGTTAGAGCTATTAGAAAGAATTATTTAA 14261 30 100.0 30 .............................. TCGGGGTGGTTTTATTTTGCCTAAATTAAT 14201 30 100.0 30 .............................. GTATTGTTGGGTTTCTAGTTACCAGAGCAG 14141 30 96.7 30 .............................G ATTCAGTAGGTGCTAACTGGTATAACTTGA 14081 30 93.3 30 ............................CG TTGTTGGGTCTTGGTTGCGTAGTGGCCCCC 14021 30 100.0 31 .............................. ACTAGCCCATATGTCTAAACCGAATCCACGC 13960 30 96.7 30 .............................A AACCATTATTAGGGTTTACGGTATTACTTG 13900 30 93.3 30 ............................AG TCCATAAGACCCTCCATTTGTTTATATCTT 13840 30 93.3 30 ............................AG AAGGGTATAGCAAATATCGTGATGGAAATG 13780 30 96.7 30 ............................A. CATCGCCAGCAACAAACTGCAATGAGCCAG 13720 30 100.0 30 .............................. GGTGTGATCATCAATACAGATGGGACAGGT 13660 30 93.3 30 ............................CG ATAGAAGATACAGAAGAAAATAATGCTATT 13600 30 96.7 30 ............................G. CAACCAAAGAACCCCAAGCAAATCGAGCAA 13540 30 96.7 30 ............................A. TATCTAAGCGTCCCATTAGAAAACCTTTAT 13480 30 100.0 30 .............................. TCAGATGAAACCATACGCACTAAATGCATT 13420 30 96.7 30 ............................A. GTAATCTTGGTATGGGAGGTGTAAAGCCAG 13360 30 96.7 30 ............................G. CGATTAAATCAGTCAAAGGACCCTAAGCCA 13300 30 96.7 30 .............................C AAACTCACAACCTAGAAAAGATTGCTAAGG 13240 30 96.7 30 ............................A. GAAAAAGCCCCATTCGTTGTGAATAGGGCT 13180 30 93.3 31 ............................AC CAAAAGCTTTACGGTAAGACACGTTATGCAG 13119 30 96.7 30 .............................A CGAAAACAAAAGATACTCATGCACCAGAGA 13059 30 90.0 30 ...............T............AA CAGCATTTACACCAGCAACCTTTAAAGCAG 12999 30 96.7 30 .............................G TTACATGCCCAATTGGTTGGCGCATGTCAT 12939 30 100.0 30 .............................. CTAAGCGAAGGCTAACGCTCACATTCAAAA 12879 30 96.7 30 .............................G TAAAACCGAATCCCAAGCTGAATAGGTTTT 12819 30 93.3 30 ............................GG ACATGTGAGCTTCACACCATCCTTCAGGCA 12759 30 100.0 30 .............................. GTTGCGGCTCTCGCATGATGTGGTTTGATC 12699 30 93.3 30 ............................AA CTGAAAAGATGTTGAGTGCAGGTTGTTCTT 12639 30 100.0 30 .............................. GATGCTGAAAACTTCACAGCAGGCAATCCA 12579 30 96.7 30 .............................G TAAAGGATGTGAGGAACGTCGTGAGTGGAT 12519 30 93.3 30 ............................AA CTGACTAGTGATTTGAGGAATGTGCTCACC 12459 30 93.3 30 ............................CA AACACAGCATTATTGGGCCTTCAATACGAT 12399 30 93.3 30 ............................GA TGCAGGCGGAGTCTGCTATGCGACTGGTAC 12339 30 90.0 30 .................T..........AA ATAACCACGGTTATGGTAAGTCACTTTTAC 12279 30 80.0 30 .......A.A.....T.T..........GC GTTCAGGTTGAGGAGATGAAGTGATGTGAT 12219 30 70.0 0 ...T...A...T.....T..C...AGCG.. | ========== ====== ====== ====== ============================== =============================== ================== 68 30 95.2 30 GTTCATGGCGGCATACGCCATTTAGAAATT # Left flank : GGCAAATGGCTAGAACGATTCATTGATTATGTACATATCACTCAACCGAGAGAAGTGCCTCGAGCCAAGATTACAGGTTATGCGCATTACTATCGAGTTAATCCTAGAATGAGTGTTGAGGAACGTATAGTTCATCAAGCACAACGTCGTAATATTTCTTTGGATCAGGCTAGACAGCATTTTAAACAATATGTTGAGCAACCAGTGGTTGAACCATACGTAAGTTTAAAAAGTCTCAGTGCAAAACGTGAGGAAAATGTAGATCGCCCCTATCGTTTATATATTGGTAAATCACTTGTTGATGAGGCAAGGGATGGGATGTTTGGAACTTATGGACTAAGCCGAATGACAACAGTCCCAGAGTTTTGACCCAATATTTTTTCTATTCTTTAACAGCTCAATAAAATCAATAAGTTACAATAGGTCTTTTTTGATTGGGTAAAATGCCAAAATCCATGATAAACACTTGTTGTAACTTATATTTTTACTATAATTTTATA # Right flank : AAGATAAAAAAACAAATGATCACTGCTTAGTATTCTTTATCTTTAAATTTTAAAGAAGAAAATATATTCTGAGCTCAAGATATTTAGTGGTGAAATTTTTATGCGCGGTTTATACCTCATTACCAATGATGACCCAATCCAATTATTATTAGAAAAATTAGACGCCGCACTCGCAACCCGTCAAATCGCAATTTTACAGTACCGCCGTAAAAAAATAGACAAAGCCGAACAGCCTGCTGAAGTTGAACAGATTAAACAGTTATGTGAAAAATATCAGGTTCCTTTTGTCATTAATGATGACCTAAAACTGGCTGCTCAGTTTGGTTTAGGTGTGCATTTAGGCCAAAGTGACGGTGAAATTACCGATGCAAAATCGCAGTTACCAGAAGGTGTCATTATTGGCCGTACTTGCTTAAACTCTTTAGAGCTTGCTCAAAAAGCAATTGCCGATGGCGCAACTTATGTTGCCTTTGGTGCGGTTTATGCAACTGCCACTAAAC # Questionable array : NO Score: 5.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.76, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.23, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-6.60,-8.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [15-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //