Array 1 78029-77399 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADMXZ010000006.1 Bifidobacterium catenulatum strain BSD2780120875_150330_A3 NODE_6_length_137928_cov_7.18254, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 78028 36 100.0 30 .................................... CCGCGCATGAGCATGGTCACAGTCCGGCCT 77962 36 100.0 30 .................................... AGAGCTTGCCGTTGTCCGATTTGACGCGTT 77896 36 100.0 30 .................................... CTGCATAAAAGCGGCAGACGGTCGGATGAT 77830 36 100.0 30 .................................... CCACGCGGTCGTAATAGTACGTTCCGGTGG 77764 36 100.0 30 .................................... TCCAGCAGTGCAAGAAGACGGAACGTCATC 77698 36 100.0 30 .................................... AAACTCAATTGCATGACGCATTTCTCCTAT 77632 36 100.0 30 .................................... CATGTCGCGAAACTTGACCGTGAGATGGCT 77566 36 100.0 30 .................................... AGCGGTTGAAGCGTCAGGAGCGTCAGGAAA 77500 36 97.2 30 ..........T......................... CCTTGCCGGACGAGTCGTCCATCCTCACGC 77434 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 10 36 99.7 30 GTTTCAGATGCCTGTCAGATCAAAGACTTAGACCAC # Left flank : ATTGCGCAGGAGTACTAGATTATGATGCTTTGTTTCAAAAGGCTGCAGTTAAGAAGTTAAATGACGGATTTAATCCTGAAGAATTGAGTAGATTATTGTTGTTGCAAACTGAGATAAAGTCGATTATTCAAGAAGAAATATGGAGAGAGAATTTGCCTCTGAGTATTCTTGATGAAGCTGATATAAAGTCAATGATAGCAATGGCTAAACCGCGTGTTGATACCAGTTCTCTGGGTTCTCTTTATGATAAAATTCAACTGGTAGTTGATACTGCCGGCGCTCTTGCCGAGGGCAGGATGCTTGTGATGCTTCATATAACTCAATATTGTGATAATGGCCAATTACTTTATTTGCATCGAGAATTATTAAGACACCATATGCAGCTTCTGGACCTGGAATGCTGCGACAAAAAAGTCCTTTTGACAGAGGGAAGAAGTCGGTATATCGATGGAGATTATGTTCAGTTCTCATAGAACGTTCAGGATTCTCCAAGGCTATCG # Right flank : CGGAGGGAAAGTGGATGTGACCTTGACAGAGTTTGTGCTTGAGGATCTTGTGCCAGTCGGCGAACTCAGTAATGGACGCACCGCTACGGTGCTGTCTAAGGCCGACCGTGCGCCGGTCCTCGTCGTCAAACGGAACGCTGTCCTACGTGCTCATGGGTATCAACGATTATCAGAATTTTCTCGACCGTCTTAGGGGCGAAGAGGACGTTATCCATGCGCAATGTGTTTTGTTAAATTGAAGTAGTCCAAAATGGCGTGTCAATCCAGTCCGAACGAGGTGATGACGTTTTCTTGGACTCCCCGACCGGGAGGAGAACCCCCTTATGGCGAAGTACAGCAGGGAGCAGCGTGACAGGGCCGTGGACCTGTACGTCAAATACGAGCGCTGCGCCGCCGACGTGATCCGCGAGCTCGGCTATCCCAGCAAGGGCGCGTTGCTGTCGTGGTACGCGGACCGGCTCGAGGAGGAGCGCACCGGCGTCCCCTCTAGGCGCGGGGAA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAGATGCCTGTCAGATCAAAGACTTAGACCAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.70,-1.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [46.7-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.68 Confidence: LOW] # Array family : NA //