Array 1 172600-172032 **** Predicted by CRISPRDetect 2.4 *** >NZ_QUWR01000006.1 Acinetobacter sp. SWAC5 Scaffold6_1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 172599 28 96.4 32 .................T.......... AAACCTAGAGCATTAGCAGCAAGACCAGTAAT 172539 28 100.0 32 ............................ ATATTTCGGACAGTTTGGCGACCGATGAAATA 172479 28 100.0 32 ............................ TCCTCCATCGTCGTTGTCGTACTTAGCCTGTG 172419 28 100.0 32 ............................ ATAGGGCGATGCAAGTGATAGTGCATACCGAC 172359 28 100.0 32 ............................ ATATCAGCAAGACATGGATTTGCTGAAAGCAG 172299 28 100.0 32 ............................ ATTGGAAACATTGCCAAGATACTCAAGAACTT 172239 28 100.0 32 ............................ TAAGGTCAAACTTGAAAATTTTCCTGTTGATC 172179 28 96.4 32 ................A........... ATGTAGCTTTTGTACTGGGATCAGCTTTTTGG 172119 28 100.0 32 ............................ CATGAGTACCACTTAGTAACATCTCCAACTTG 172059 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 10 28 99.3 32 GTTCACTGCCATGTAGGCAGCTTAGAAA # Left flank : TGTACACAGCGCATTGGGTTATGTATCGCCTTTTGAGTTTGAAGCAATGTACTATGATAAGATTAACCCGTTAGGTCACGTGGCCTAACTTAAATAAAAATGTCTCCGACAAACCCGGTACGGTTCAAGCTTAGAAATCAGCAAGATCATGGGTTTGATCAACAATTT # Right flank : TATCACAAAGGTACTACCTACAACTCCTAACCTAATTATTTACAGATAACTAAATTTTCAAACATAAAAAAGCCCTAACACGAATTAGGGCCAATTTATGCAAGCTTTGGGTTTAAGTTTTAAACCGCTTCAGCTTCTAAAATTTCAAAATCATGGGTAATTTCTACGCCACCGTCCATGAGCATTTTGCTCGCAGAACAATATTTTTCAGCAGAAAGCTCAACCGCTTTCGCCACTTGCTTTTCTTTTACACCTTTACCTGTAACTACAAAGTGCAAATGAATTTTGGTAAATACAGCAGGAATTGTATCTGCACGTTCAGCGCTTAAGTCACAACGAACAGCCGTAATATCTTGGCGTGCTTTCTTTAAAATGGTCACAATATCAAAAGAAGCGCAACCACCAAGGCCATTCAAAATCAATTCCATTGGACGCGGACCGCGATTTTCACCGCCGTATTCTGCCGAACCATCCATGATTATGCTATGACCGCTCTGAGT # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCATGTAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched GTTCACTGCCATGTAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.40,-7.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [71.7-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [1.05,4.5 Confidence: MEDIUM] # Array family : I-F [Matched known repeat from this family], // Array 1 3193-162 **** Predicted by CRISPRDetect 2.4 *** >NZ_QUWR01000009.1 Acinetobacter sp. SWAC5 Scaffold9_1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 3192 28 100.0 32 ............................ TTTTCGACATTCTTCTTCTAAATTTTGTAATG 3132 28 100.0 32 ............................ TAGTTATTTAGTTACAGAGCGTTTACAAATGA 3072 28 100.0 32 ............................ AAAGTCAATTGGTTTATTGCCAACATTTTTAT 3012 28 100.0 32 ............................ ATATAAATTTACATAATCGTAATGACGGCCAT 2952 28 100.0 32 ............................ AGTAGTAAACAGATGCCAATTTTGCACCGTAT 2892 28 100.0 32 ............................ CGTCAGGGTTTGGAGTTGTTGTTGAATCGGTT 2832 28 100.0 33 ............................ TTCAATCGGTTTTTGTTCTTCAGGCTTAAAATC 2771 28 100.0 32 ............................ TTATGAAAGTCTCCCGACTCATTACACAGGTA 2711 28 100.0 32 ............................ ATCACGTAATCAATGCCCTCCATAAGAGCATG 2651 28 100.0 32 ............................ ATCTGATACCACCTCTACAGGCACAACCGATT 2591 28 100.0 32 ............................ TACTGGCTCAATAAAACGCTTCATAACGTCAA 2531 28 100.0 32 ............................ TTCAGCAGTTTGATCAGTTGGAATAGCTGAGG 2471 28 100.0 32 ............................ TATCTTGATGTATCATTCACACATGTTAAAGT 2411 28 100.0 33 ............................ CGATCAAAGACGATCTTGGCAACTGTTTCGAAT 2350 28 100.0 32 ............................ TGAAAAAAAAGCTAATGTTAAGCAGATGCTTG 2290 28 100.0 32 ............................ CGAGCAACAAGCGTTTAGCTCAAGACACAATG 2230 28 100.0 32 ............................ TCATTGGCACGGTTCAAAAAGGTCATTTGTGT 2170 28 100.0 32 ............................ CAGAATGGTCGACATCTCTTCCAGACTGGGAG 2110 28 100.0 32 ............................ TGCGCATTCCGCGATTCACACGCTCTGCTTTA 2050 28 100.0 32 ............................ AGTGGATAGAGAGTGGTTTAATGTTGGTTGTG 1990 28 100.0 32 ............................ GAATGGGTGGCGACGCATTGACATTCTTTTTA 1930 28 100.0 32 ............................ AGATGGGCTGGAACCTTTGGCATTGGATCTGG 1870 28 100.0 32 ............................ AATATTCGGGACACAGACGGTCGGATCTGCAT 1810 28 100.0 32 ............................ AGTCGAGCACACAATTGAGCTGTCAGGTATTT 1750 28 100.0 32 ............................ ATTAATAAGATGGGGGTACAGGAATTTGAATC 1690 28 100.0 32 ............................ GACAAAGCCCGGGATAGATGCTTTACCAAACT 1630 28 100.0 32 ............................ GTCACCAGTAGTCTTATAGAAAATATTCATGC 1570 28 100.0 32 ............................ TATGGATCGGTCATCATCATCAGCAATCCGAA 1510 28 100.0 33 ............................ CTTCAAAGAAAGATATGCTTCCCATGTGTTCTC 1449 28 100.0 32 ............................ AATCGCACAGAAACCAACAATAAAGAATAATT 1389 28 100.0 32 ............................ CGTATTTTCGGGTTGTACAAAGATGAATGGTC 1329 28 100.0 32 ............................ TCTGTGAATGGATTAATTGGACAAAAGAAAAT 1269 28 100.0 32 ............................ ACTGGCGGTACTGCTGAAAGACCTTCTGGCTA 1209 28 100.0 32 ............................ AAAGTAAAGTTGCTATTTGCTGCAGCACCACC 1149 28 100.0 32 ............................ TGATCTGTATGGCAGTGGCTGTAAGTTGGATA 1089 28 100.0 32 ............................ AGCGTTAAGCGAAATGTTGTTTAAAGGCGATG 1029 28 100.0 32 ............................ AAGTATGGGTATTGCTTTTGACAATGGGTACC 969 28 100.0 32 ............................ TTCTGTCTTGGCATACATAAATTTCAATCCCG 909 28 100.0 32 ............................ ATCGGAAAAAGGCGGGAAGCTGATTATTCAAG 849 28 100.0 32 ............................ AACAGGTGCAATTGGACCGTTCCAAACTACAA 789 28 100.0 32 ............................ TATGAGACAGATACACACGTATTTGATTTGGA 729 28 100.0 32 ............................ ATATCGAGCAGTGGCGCAACGAGCTGATGAAT 669 28 100.0 32 ............................ AAAAGCGTCACGAATTAACGGTACGTTATGAC 609 28 100.0 32 ............................ ATGTGACTGGTAATACCTTGGAATTAGGTAAA 549 28 100.0 32 ............................ AAATTTTTGGAAATATCAGCACTGGTTTTAGG 489 28 100.0 32 ............................ ACTTGAAGAAGTACTGGTCGAAGGCAAGTTAC 429 28 100.0 32 ............................ CAAAAATGACAGGAATTGATCCACCTTCATCT 369 28 100.0 32 ............................ AATAGAAGCTAAAGCAATAACAGAAGTTTTAA 309 28 100.0 32 ............................ AAATGTTGAGCATAAGGGTAACTGGAAGCGTC 249 28 100.0 32 ............................ GAGCAGAAACATTATCTGGATATTTGTTATGA 189 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 51 28 100.0 32 GTTCACTGCCATGTAGGCAGCTTAGAAA # Left flank : TTGGATATCCGAAAATGGCTAGAACGTTTAGAAGATTATGTACATATTACTTCTATCCGTGAAGTACCTAGCGACATCAAAGGCTATGCAGTTTATAAACGTAAACAAGTGAAAACCAATGCTCAGCGTTTGGCTCGTCACCGTGTAAAACGTGGAGATATTGGCTTTGATGAAGCACTTGCTCGATATAGCAATGTGGTGACAACAACCAACTTGCCGTATATCGAAATGAAAAGTTTAAGTACGTCTGATCAGCAAGGTGAAAAACGTTTTAAATTATTTATCGAAAAGCAATCTGCTGATAAATCTGAAAATCAGGTTTTTAGCACTTATGGATTAAGTTCCGAATCATCGGTACCCGAATTTTAACCCAATATTTTTTTACTCTTTAACAGCTTAATAAAATCAATAAGTTATGATAGTGGTTTAAACCTTGGGTCTTTTTATAGATTTAAGGGTTAAACTGCTGTTATAGCTTTATTTTTTGCTATAAAATTACT # Right flank : AAATATTTGTAATGCATCAGCAGATAACTTGCCGTTGAACCGTACCGGGTTTGTCGGAGACTCAGTATTCTGAGAGAATGTTCCGATGACCAAATTAAAATATACCCCTGAAATCAGAGAAAGAGCGGTTCAATTATTGATTGAATCTGAAAAAGACTATCC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCATGTAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched GTTCACTGCCATGTAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.40,-7.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [55.0-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.77 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //